RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 ARIH2O95376 493 aa16.73■□□□□ 0.27
LYSMD3-202ENST00000453259 PTK7Q13308 1070 aa16.73■□□□□ 0.27
LYSMD3-202ENST00000453259 IKBKEQ14164 716 aa16.73■□□□□ 0.27
LYSMD3-202ENST00000453259 PUS10Q3MIT2 529 aaKnown RBP16.73■□□□□ 0.27
LYSMD3-202ENST00000453259 GDF6Q6KF10 455 aaPredicted RBP16.73■□□□□ 0.27
LYSMD3-202ENST00000453259 C7orf31Q8N865 590 aa16.73■□□□□ 0.27
LYSMD3-202ENST00000453259 OTUD7AQ8TE49 926 aaPredicted RBP16.73■□□□□ 0.27
LYSMD3-202ENST00000453259 COPS5Q92905 334 aa16.73■□□□□ 0.27
LYSMD3-202ENST00000453259 EPHX3Q9H6B9 360 aa16.73■□□□□ 0.27
LYSMD3-202ENST00000453259 PI4K2BG5E9Z4 385 aa16.72■□□□□ 0.27
LYSMD3-202ENST00000453259 EIF3JO75822 258 aaKnown RBP16.72■□□□□ 0.27
LYSMD3-202ENST00000453259 F2P00734 622 aa16.72■□□□□ 0.27
LYSMD3-202ENST00000453259 HSPD1P10809 573 aaKnown RBP16.72■□□□□ 0.27
LYSMD3-202ENST00000453259 CKBP12277 381 aa16.72■□□□□ 0.27
LYSMD3-202ENST00000453259 LAMC2Q13753 1193 aa16.72■□□□□ 0.27
LYSMD3-202ENST00000453259 KRT40Q6A162 431 aa16.72■□□□□ 0.27
LYSMD3-202ENST00000453259 KCNV1Q6PIU1 500 aa16.72■□□□□ 0.27
LYSMD3-202ENST00000453259 PPTC7Q8NI37 304 aa16.72■□□□□ 0.27
LYSMD3-202ENST00000453259 KAT2BQ92831 832 aa16.72■□□□□ 0.27
LYSMD3-202ENST00000453259 MAP3K20Q9NYL2 800 aaKnown RBP16.72■□□□□ 0.27
LYSMD3-202ENST00000453259 CTNNA3Q9UI47 895 aa16.72■□□□□ 0.27
LYSMD3-202ENST00000453259 INSL6Q9Y581 213 aa16.72■□□□□ 0.27
LYSMD3-202ENST00000453259 TET1Q8NFU7 2136 aa16.72■□□□□ 0.27
LYSMD3-202ENST00000453259 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.71■□□□□ 0.27
LYSMD3-202ENST00000453259 HOXD8P13378 290 aaPredicted RBP16.71■□□□□ 0.27
LYSMD3-202ENST00000453259 GPNMBQ14956 572 aa16.71■□□□□ 0.27
LYSMD3-202ENST00000453259 LEXMQ3ZCV2 418 aa16.71■□□□□ 0.27
LYSMD3-202ENST00000453259 USH1GQ495M9 461 aa16.71■□□□□ 0.27
LYSMD3-202ENST00000453259 ASPRV1Q53RT3 343 aa16.71■□□□□ 0.27
LYSMD3-202ENST00000453259 IQCA1Q86XH1 822 aa16.71■□□□□ 0.27
LYSMD3-202ENST00000453259 SAMD3Q8N6K7 520 aa16.71■□□□□ 0.27
LYSMD3-202ENST00000453259 SYTL5Q8TDW5 730 aaPredicted RBP16.71■□□□□ 0.27
LYSMD3-202ENST00000453259 DHX38Q92620 1227 aaKnown RBP16.71■□□□□ 0.27
LYSMD3-202ENST00000453259 SAMD11Q96NU1 681 aa16.71■□□□□ 0.27
LYSMD3-202ENST00000453259 RMDN3Q96TC7 470 aa16.71■□□□□ 0.27
LYSMD3-202ENST00000453259 UBE2ZQ9H832 354 aaPredicted RBP16.71■□□□□ 0.27
LYSMD3-202ENST00000453259 SUGCTQ9HAC7 445 aa16.71■□□□□ 0.27
LYSMD3-202ENST00000453259 MRPL11Q9Y3B7 192 aaKnown RBP16.71■□□□□ 0.27
LYSMD3-202ENST00000453259 PTPRSQ13332 1948 aa16.7■□□□□ 0.26
LYSMD3-202ENST00000453259 COL4A6Q14031 1691 aa16.7■□□□□ 0.26
LYSMD3-202ENST00000453259 LCHNA4D1U4 455 aa16.7■□□□□ 0.26
LYSMD3-202ENST00000453259 LINC01553A4QN01 128 aa16.7■□□□□ 0.26
LYSMD3-202ENST00000453259 HAS3O00219 553 aa16.7■□□□□ 0.26
LYSMD3-202ENST00000453259 NBNO60934 754 aa16.7■□□□□ 0.26
LYSMD3-202ENST00000453259 GHRHRQ02643 423 aa16.7■□□□□ 0.26
LYSMD3-202ENST00000453259 CDC37Q16543 378 aaPredicted RBP16.7■□□□□ 0.26
LYSMD3-202ENST00000453259 SEPT14Q6ZU15 432 aa16.7■□□□□ 0.26
LYSMD3-202ENST00000453259 GDPD5Q8WTR4 605 aa16.7■□□□□ 0.26
LYSMD3-202ENST00000453259 ANKS1AQ92625 1134 aa16.7■□□□□ 0.26
LYSMD3-202ENST00000453259 DDX41Q9UJV9 622 aaKnown RBP16.7■□□□□ 0.26
LYSMD3-202ENST00000453259 PCDHB15Q9Y5E8 787 aa16.7■□□□□ 0.26
LYSMD3-202ENST00000453259 KIAA1217Q5T5P2 1943 aa16.7■□□□□ 0.26
LYSMD3-202ENST00000453259 SIP14410 1827 aa16.7■□□□□ 0.26
LYSMD3-202ENST00000453259 CCDC171Q6TFL3 1326 aa16.7■□□□□ 0.26
LYSMD3-202ENST00000453259 A0A0D9SFI3 127 aa16.69■□□□□ 0.26
LYSMD3-202ENST00000453259 CAND2O75155 1236 aa16.69■□□□□ 0.26
LYSMD3-202ENST00000453259 PPFIA4O75335 1185 aa16.69■□□□□ 0.26
LYSMD3-202ENST00000453259 PSEN2P49810 448 aa16.69■□□□□ 0.26
LYSMD3-202ENST00000453259 PDE1AP54750 535 aa16.69■□□□□ 0.26
LYSMD3-202ENST00000453259 CHMP4BP1P59074 171 aa16.69■□□□□ 0.26
LYSMD3-202ENST00000453259 DEFB103AP81534 67 aa16.69■□□□□ 0.26
LYSMD3-202ENST00000453259 MFSD10Q14728 455 aa16.69■□□□□ 0.26
LYSMD3-202ENST00000453259 PTPROQ16827 1216 aa16.69■□□□□ 0.26
LYSMD3-202ENST00000453259 LY6KQ17RY6 165 aa16.69■□□□□ 0.26
LYSMD3-202ENST00000453259 PNMA1Q8ND90 353 aa16.69■□□□□ 0.26
LYSMD3-202ENST00000453259 CRBNQ96SW2 442 aa16.69■□□□□ 0.26
LYSMD3-202ENST00000453259 HDAC6Q9UBN7 1215 aa16.69■□□□□ 0.26
LYSMD3-202ENST00000453259 MRVI1Q9Y6F6 885 aa16.69■□□□□ 0.26
LYSMD3-202ENST00000453259 TRIP12Q14669 1992 aaPredicted RBP16.69■□□□□ 0.26
LYSMD3-202ENST00000453259 PRR33A8MZF0 331 aa16.68■□□□□ 0.26
LYSMD3-202ENST00000453259 LGR5O75473 907 aa16.68■□□□□ 0.26
LYSMD3-202ENST00000453259 AMHP03971 560 aa16.68■□□□□ 0.26
LYSMD3-202ENST00000453259 TGFB3P10600 412 aa16.68■□□□□ 0.26
LYSMD3-202ENST00000453259 ALADP13716 330 aa16.68■□□□□ 0.26
LYSMD3-202ENST00000453259 TRAF1Q13077 416 aa16.68■□□□□ 0.26
LYSMD3-202ENST00000453259 KIAA0753Q2KHM9 967 aa16.68■□□□□ 0.26
LYSMD3-202ENST00000453259 TRIM71Q2Q1W2 868 aaKnown RBP16.68■□□□□ 0.26
LYSMD3-202ENST00000453259 TIGD5Q53EQ6 642 aa16.68■□□□□ 0.26
LYSMD3-202ENST00000453259 ARHGEF16Q5VV41 709 aa16.68■□□□□ 0.26
LYSMD3-202ENST00000453259 FAM178BQ8IXR5 827 aa16.68■□□□□ 0.26
LYSMD3-202ENST00000453259 SP7Q8TDD2 431 aaPredicted RBP16.68■□□□□ 0.26
LYSMD3-202ENST00000453259 FAM227BQ96M60 508 aa16.68■□□□□ 0.26
LYSMD3-202ENST00000453259 TAAR1Q96RJ0 339 aa16.68■□□□□ 0.26
LYSMD3-202ENST00000453259 KAT14Q9H8E8 782 aa16.68■□□□□ 0.26
LYSMD3-202ENST00000453259 C11orf16Q9NQ32 467 aa16.68■□□□□ 0.26
LYSMD3-202ENST00000453259 FAM50BQ9Y247 325 aa16.68■□□□□ 0.26
LYSMD3-202ENST00000453259 HTRA4P83105 476 aaPredicted RBP16.67■□□□□ 0.26
LYSMD3-202ENST00000453259 TRAF7Q6Q0C0 670 aa16.67■□□□□ 0.26
LYSMD3-202ENST00000453259 CHST3Q7LGC8 479 aa16.67■□□□□ 0.26
LYSMD3-202ENST00000453259 FBXO11Q86XK2 927 aa16.67■□□□□ 0.26
LYSMD3-202ENST00000453259 DHX37Q8IY37 1157 aaKnown RBP16.67■□□□□ 0.26
LYSMD3-202ENST00000453259 ADGRF4Q8IZF3 695 aa16.67■□□□□ 0.26
LYSMD3-202ENST00000453259 GJD3Q8N144 294 aa16.67■□□□□ 0.26
LYSMD3-202ENST00000453259 FBXO22Q8NEZ5 403 aa16.67■□□□□ 0.26
LYSMD3-202ENST00000453259 MRPL38Q96DV4 380 aaKnown RBP16.67■□□□□ 0.26
LYSMD3-202ENST00000453259 PXMP2Q9NR77 195 aa16.67■□□□□ 0.26
LYSMD3-202ENST00000453259 PIEZO1Q92508 2521 aa16.67■□□□□ 0.26
LYSMD3-202ENST00000453259 ZNF213O14771 459 aa16.66■□□□□ 0.26
LYSMD3-202ENST00000453259 NR3C2P08235 984 aa16.66■□□□□ 0.26
LYSMD3-202ENST00000453259 GOLGA8HP0CJ92 632 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms