RNA–Protein interactions for RNA: ENST00000452495.1

TRAPPC12-211, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-211ENST00000452495 FOSBP53539 338 aa16.65■□□□□ 0.26
TRAPPC12-211ENST00000452495 FBXO16Q8IX29 292 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC12-211ENST00000452495 DIS3L2Q8IYB7 885 aaKnown RBP16.65■□□□□ 0.26
TRAPPC12-211ENST00000452495 RASGRP4Q8TDF6 673 aa16.65■□□□□ 0.26
TRAPPC12-211ENST00000452495 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.65■□□□□ 0.26
TRAPPC12-211ENST00000452495 CCDC194A0A1B0GVG4 234 aa16.64■□□□□ 0.25
TRAPPC12-211ENST00000452495 ADAMTS3O15072 1205 aa16.64■□□□□ 0.25
TRAPPC12-211ENST00000452495 SEPT4O43236 478 aa16.64■□□□□ 0.25
TRAPPC12-211ENST00000452495 MYCLP12524 364 aaPredicted RBP16.64■□□□□ 0.25
TRAPPC12-211ENST00000452495 CCL5P13501 91 aa16.64■□□□□ 0.25
TRAPPC12-211ENST00000452495 AKR1A1P14550 325 aa16.64■□□□□ 0.25
TRAPPC12-211ENST00000452495 ARHGAP4P98171 946 aa16.64■□□□□ 0.25
TRAPPC12-211ENST00000452495 NONOQ15233 471 aaKnown RBP eCLIP16.64■□□□□ 0.25
TRAPPC12-211ENST00000452495 GNPTABQ3T906 1256 aa16.64■□□□□ 0.25
TRAPPC12-211ENST00000452495 TRPV1Q8NER1 839 aa16.64■□□□□ 0.25
TRAPPC12-211ENST00000452495 CRYGNQ8WXF5 182 aa16.64■□□□□ 0.25
TRAPPC12-211ENST00000452495 PGBD1Q96JS3 809 aa16.64■□□□□ 0.25
TRAPPC12-211ENST00000452495 PAK6Q9NQU5 681 aaPredicted RBP16.64■□□□□ 0.25
TRAPPC12-211ENST00000452495 RBM47A0AV96 593 aaKnown RBP16.63■□□□□ 0.25
TRAPPC12-211ENST00000452495 MYCNP04198 464 aaPredicted RBP16.63■□□□□ 0.25
TRAPPC12-211ENST00000452495 CYP3A4P08684 503 aa16.63■□□□□ 0.25
TRAPPC12-211ENST00000452495 CCND3P30281 292 aaPredicted RBP16.63■□□□□ 0.25
TRAPPC12-211ENST00000452495 EEPD1Q7L9B9 569 aa16.63■□□□□ 0.25
TRAPPC12-211ENST00000452495 TNS4Q8IZW8 715 aa16.63■□□□□ 0.25
TRAPPC12-211ENST00000452495 SCFD2Q8WU76 684 aa16.63■□□□□ 0.25
TRAPPC12-211ENST00000452495 TNFRSF25Q93038 417 aa16.63■□□□□ 0.25
TRAPPC12-211ENST00000452495 INPP4AQ96PE3 977 aaPredicted RBP16.63■□□□□ 0.25
TRAPPC12-211ENST00000452495 UNC93B1Q9H1C4 597 aa16.63■□□□□ 0.25
TRAPPC12-211ENST00000452495 FOXP1Q9H334 677 aaPredicted RBP16.63■□□□□ 0.25
TRAPPC12-211ENST00000452495 FAM184BQ9ULE4 1060 aa16.63■□□□□ 0.25
TRAPPC12-211ENST00000452495 DDX49Q9Y6V7 483 aaKnown RBP16.63■□□□□ 0.25
TRAPPC12-211ENST00000452495 H3BQV1 296 aa16.62■□□□□ 0.25
TRAPPC12-211ENST00000452495 CNGA1P29973 690 aa16.62■□□□□ 0.25
TRAPPC12-211ENST00000452495 MRPS9P82933 396 aaKnown RBP16.62■□□□□ 0.25
TRAPPC12-211ENST00000452495 GUCY1B3Q02153 619 aa16.62■□□□□ 0.25
TRAPPC12-211ENST00000452495 MTFR1Q15390 333 aa16.62■□□□□ 0.25
TRAPPC12-211ENST00000452495 CCDC144BQ3MJ40 725 aa16.62■□□□□ 0.25
TRAPPC12-211ENST00000452495 PRAMEF19Q5SWL8 479 aa16.62■□□□□ 0.25
TRAPPC12-211ENST00000452495 IFFO2Q5TF58 517 aa16.62■□□□□ 0.25
TRAPPC12-211ENST00000452495 IQSEC1Q6DN90 963 aa16.62■□□□□ 0.25
TRAPPC12-211ENST00000452495 TAPT1Q6NXT6 567 aa16.62■□□□□ 0.25
TRAPPC12-211ENST00000452495 KCNV1Q6PIU1 500 aa16.62■□□□□ 0.25
TRAPPC12-211ENST00000452495 OXER1Q8TDS5 423 aa16.62■□□□□ 0.25
TRAPPC12-211ENST00000452495 RNF208Q9H0X6 261 aa16.62■□□□□ 0.25
TRAPPC12-211ENST00000452495 DDX20Q9UHI6 824 aaKnown RBP16.62■□□□□ 0.25
TRAPPC12-211ENST00000452495 WDR81Q562E7 1941 aa16.62■□□□□ 0.25
TRAPPC12-211ENST00000452495 BTBD18B2RXH4 712 aa16.61■□□□□ 0.25
TRAPPC12-211ENST00000452495 NKRFO15226 690 aaKnown RBP eCLIP16.61■□□□□ 0.25
TRAPPC12-211ENST00000452495 FIBPO43427 364 aa16.61■□□□□ 0.25
TRAPPC12-211ENST00000452495 PDIA4P13667 645 aaKnown RBP16.61■□□□□ 0.25
TRAPPC12-211ENST00000452495 CAPN2P17655 700 aa16.61■□□□□ 0.25
TRAPPC12-211ENST00000452495 USP11P51784 963 aa16.61■□□□□ 0.25
TRAPPC12-211ENST00000452495 SETQ01105 290 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC12-211ENST00000452495 NR5A1Q13285 461 aa16.61■□□□□ 0.25
TRAPPC12-211ENST00000452495 TTLL4Q14679 1199 aa16.61■□□□□ 0.25
TRAPPC12-211ENST00000452495 LARP1BQ659C4 914 aaKnown RBP16.61■□□□□ 0.25
TRAPPC12-211ENST00000452495 MOXD1Q6UVY6 613 aa16.61■□□□□ 0.25
TRAPPC12-211ENST00000452495 NIPA1Q7RTP0 329 aa16.61■□□□□ 0.25
TRAPPC12-211ENST00000452495 NLRX1Q86UT6 975 aa16.61■□□□□ 0.25
TRAPPC12-211ENST00000452495 TBCKQ8TEA7 893 aa16.61■□□□□ 0.25
TRAPPC12-211ENST00000452495 GPRASP2Q96D09 838 aa16.61■□□□□ 0.25
TRAPPC12-211ENST00000452495 ABHD8Q96I13 439 aa16.61■□□□□ 0.25
TRAPPC12-211ENST00000452495 CDHR1Q96JP9 859 aa16.61■□□□□ 0.25
TRAPPC12-211ENST00000452495 NAP1L4Q99733 375 aaKnown RBP16.61■□□□□ 0.25
TRAPPC12-211ENST00000452495 UBIAD1Q9Y5Z9 338 aa16.61■□□□□ 0.25
TRAPPC12-211ENST00000452495 KIAA0100Q14667 2235 aaKnown RBP16.6■□□□□ 0.25
TRAPPC12-211ENST00000452495 RGS20O76081 388 aa16.6■□□□□ 0.25
TRAPPC12-211ENST00000452495 GJB1P08034 283 aa16.6■□□□□ 0.25
TRAPPC12-211ENST00000452495 TGFB3P10600 412 aa16.6■□□□□ 0.25
TRAPPC12-211ENST00000452495 RARBP10826 455 aa16.6■□□□□ 0.25
TRAPPC12-211ENST00000452495 ICAM3P32942 547 aa16.6■□□□□ 0.25
TRAPPC12-211ENST00000452495 CIITAP33076 1130 aa16.6■□□□□ 0.25
TRAPPC12-211ENST00000452495 ANP32AP39687 249 aaKnown RBP16.6■□□□□ 0.25
TRAPPC12-211ENST00000452495 ADCYAP1R1P41586 468 aa16.6■□□□□ 0.25
TRAPPC12-211ENST00000452495 GNL2Q13823 731 aaKnown RBP16.6■□□□□ 0.25
TRAPPC12-211ENST00000452495 CEP55Q53EZ4 464 aa16.6■□□□□ 0.25
TRAPPC12-211ENST00000452495 SEPT14Q6ZU15 432 aa16.6■□□□□ 0.25
TRAPPC12-211ENST00000452495 PIK3AP1Q6ZUJ8 805 aa16.6■□□□□ 0.25
TRAPPC12-211ENST00000452495 NEK8Q86SG6 692 aa16.6■□□□□ 0.25
TRAPPC12-211ENST00000452495 TMEM106CQ9BVX2 250 aa16.6■□□□□ 0.25
TRAPPC12-211ENST00000452495 WDR11Q9BZH6 1224 aa16.6■□□□□ 0.25
TRAPPC12-211ENST00000452495 FOXD4L1Q9NU39 408 aa16.6■□□□□ 0.25
TRAPPC12-211ENST00000452495 MRVI1Q9Y6F6 885 aa16.6■□□□□ 0.25
TRAPPC12-211ENST00000452495 DUSP11O75319 330 aaKnown RBP16.59■□□□□ 0.25
TRAPPC12-211ENST00000452495 GCFC2P16383 781 aaKnown RBP16.59■□□□□ 0.25
TRAPPC12-211ENST00000452495 ITGB5P18084 799 aa16.59■□□□□ 0.25
TRAPPC12-211ENST00000452495 U2AF2P26368 475 aaKnown RBP eCLIP16.59■□□□□ 0.25
TRAPPC12-211ENST00000452495 ZNF76P36508 570 aa16.59■□□□□ 0.25
TRAPPC12-211ENST00000452495 TNFAIP2Q03169 654 aa16.59■□□□□ 0.25
TRAPPC12-211ENST00000452495 MTMR1Q13613 665 aa16.59■□□□□ 0.25
TRAPPC12-211ENST00000452495 INF2Q27J81 1249 aa16.59■□□□□ 0.25
TRAPPC12-211ENST00000452495 DUSP28Q4G0W2 176 aa16.59■□□□□ 0.25
TRAPPC12-211ENST00000452495 CCDC62Q6P9F0 684 aa16.59■□□□□ 0.25
TRAPPC12-211ENST00000452495 NOSTRINQ8IVI9 506 aa16.59■□□□□ 0.25
TRAPPC12-211ENST00000452495 MXRA8Q9BRK3 442 aa16.59■□□□□ 0.25
TRAPPC12-211ENST00000452495 JADE2Q9NQC1 790 aa16.59■□□□□ 0.25
TRAPPC12-211ENST00000452495 PDGFCQ9NRA1 345 aa16.59■□□□□ 0.25
TRAPPC12-211ENST00000452495 Q9Y3F1 56 aa16.59■□□□□ 0.25
TRAPPC12-211ENST00000452495 MAFGO15525 162 aa16.58■□□□□ 0.24
TRAPPC12-211ENST00000452495 MYCP01106 439 aaPredicted RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms