RNA–Protein interactions for RNA: ENST00000452065.5

HDLBP-224, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-224ENST00000452065 CRYGNQ8WXF5 182 aa12.73□□□□□ -0.37
HDLBP-224ENST00000452065 GJB4Q9NTQ9 266 aa12.73□□□□□ -0.37
HDLBP-224ENST00000452065 TMEM260Q9NX78 707 aa12.73□□□□□ -0.37
HDLBP-224ENST00000452065 ZHX1Q9UKY1 873 aaPredicted RBP12.73□□□□□ -0.37
HDLBP-224ENST00000452065 KCNJ14Q9UNX9 436 aa12.73□□□□□ -0.37
HDLBP-224ENST00000452065 Q9Y3F1 56 aa12.73□□□□□ -0.37
HDLBP-224ENST00000452065 CENPFP49454 3210 aa12.72□□□□□ -0.37
HDLBP-224ENST00000452065 MAFGO15525 162 aa12.72□□□□□ -0.37
HDLBP-224ENST00000452065 DUSP11O75319 330 aaKnown RBP12.72□□□□□ -0.37
HDLBP-224ENST00000452065 RGS20O76081 388 aa12.72□□□□□ -0.37
HDLBP-224ENST00000452065 MMP1P03956 469 aa12.72□□□□□ -0.37
HDLBP-224ENST00000452065 CYP3A4P08684 503 aa12.72□□□□□ -0.37
HDLBP-224ENST00000452065 MYCLP12524 364 aaPredicted RBP12.72□□□□□ -0.37
HDLBP-224ENST00000452065 ICAM3P32942 547 aa12.72□□□□□ -0.37
HDLBP-224ENST00000452065 USP11P51784 963 aa12.72□□□□□ -0.37
HDLBP-224ENST00000452065 NKX3-2P78367 333 aa12.72□□□□□ -0.37
HDLBP-224ENST00000452065 TNFAIP2Q03169 654 aa12.72□□□□□ -0.37
HDLBP-224ENST00000452065 JAKMIP3Q5VZ66 844 aa12.72□□□□□ -0.37
HDLBP-224ENST00000452065 KRT40Q6A162 431 aa12.72□□□□□ -0.37
HDLBP-224ENST00000452065 CCDC62Q6P9F0 684 aa12.72□□□□□ -0.37
HDLBP-224ENST00000452065 EEPD1Q7L9B9 569 aa12.72□□□□□ -0.37
HDLBP-224ENST00000452065 FBXO16Q8IX29 292 aaPredicted RBP12.72□□□□□ -0.37
HDLBP-224ENST00000452065 IL31RAQ8NI17 732 aa12.72□□□□□ -0.37
HDLBP-224ENST00000452065 SCFD2Q8WU76 684 aa12.72□□□□□ -0.37
HDLBP-224ENST00000452065 C8orf76Q96K31 380 aa12.72□□□□□ -0.37
HDLBP-224ENST00000452065 INPP4AQ96PE3 977 aaPredicted RBP12.72□□□□□ -0.37
HDLBP-224ENST00000452065 DEFB118Q96PH6 123 aa12.72□□□□□ -0.37
HDLBP-224ENST00000452065 ANO3Q9BYT9 981 aa12.72□□□□□ -0.37
HDLBP-224ENST00000452065 PDGFCQ9NRA1 345 aa12.72□□□□□ -0.37
HDLBP-224ENST00000452065 OGDHLQ9ULD0 1010 aa12.72□□□□□ -0.37
HDLBP-224ENST00000452065 SMC3Q9UQE7 1217 aa12.72□□□□□ -0.37
HDLBP-224ENST00000452065 DDX49Q9Y6V7 483 aaKnown RBP12.72□□□□□ -0.37
HDLBP-224ENST00000452065 CCDC85CA6NKD9 419 aa12.71□□□□□ -0.37
HDLBP-224ENST00000452065 SPATA31C2B4DYI2 1134 aa12.71□□□□□ -0.37
HDLBP-224ENST00000452065 NKRFO15226 690 aaKnown RBP eCLIP12.71□□□□□ -0.371e-8■■□□□ 12.2
HDLBP-224ENST00000452065 MYCP01106 439 aaPredicted RBP12.71□□□□□ -0.37
HDLBP-224ENST00000452065 RARBP10826 455 aa12.71□□□□□ -0.37
HDLBP-224ENST00000452065 GJB2P29033 226 aa12.71□□□□□ -0.37
HDLBP-224ENST00000452065 ADCYAP1R1P41586 468 aa12.71□□□□□ -0.37
HDLBP-224ENST00000452065 DUSP28Q4G0W2 176 aa12.71□□□□□ -0.37
HDLBP-224ENST00000452065 KRT25Q7Z3Z0 450 aa12.71□□□□□ -0.37
HDLBP-224ENST00000452065 HSCBQ8IWL3 235 aa12.71□□□□□ -0.37
HDLBP-224ENST00000452065 ANKLE1Q8NAG6 615 aa12.71□□□□□ -0.37
HDLBP-224ENST00000452065 U2AF1L4Q8WU68 220 aaKnown RBP12.71□□□□□ -0.37
HDLBP-224ENST00000452065 WDR11Q9BZH6 1224 aa12.71□□□□□ -0.37
HDLBP-224ENST00000452065 BRMS1Q9HCU9 246 aa12.71□□□□□ -0.37
HDLBP-224ENST00000452065 GNEQ9Y223 722 aaKnown RBP12.71□□□□□ -0.37
HDLBP-224ENST00000452065 UBIAD1Q9Y5Z9 338 aa12.71□□□□□ -0.37
HDLBP-224ENST00000452065 MEIS1O00470 390 aa12.7□□□□□ -0.38
HDLBP-224ENST00000452065 TXNP10599 105 aaKnown RBP12.7□□□□□ -0.38
HDLBP-224ENST00000452065 SMPD1P17405 629 aa12.7□□□□□ -0.38
HDLBP-224ENST00000452065 CIITAP33076 1130 aa12.7□□□□□ -0.38
HDLBP-224ENST00000452065 KRT2P35908 639 aa12.7□□□□□ -0.38
HDLBP-224ENST00000452065 ARHGAP4P98171 946 aa12.7□□□□□ -0.38
HDLBP-224ENST00000452065 TTLL4Q14679 1199 aa12.7□□□□□ -0.38
HDLBP-224ENST00000452065 SAFBQ15424 915 aaKnown RBP eCLIP12.7□□□□□ -0.38
HDLBP-224ENST00000452065 GNPTABQ3T906 1256 aa12.7□□□□□ -0.38
HDLBP-224ENST00000452065 SEPT14Q6ZU15 432 aa12.7□□□□□ -0.38
HDLBP-224ENST00000452065 NIPA1Q7RTP0 329 aa12.7□□□□□ -0.38
HDLBP-224ENST00000452065 NLRX1Q86UT6 975 aa12.7□□□□□ -0.38
HDLBP-224ENST00000452065 ARRDC4Q8NCT1 418 aa12.7□□□□□ -0.38
HDLBP-224ENST00000452065 RASGRP4Q8TDF6 673 aa12.7□□□□□ -0.38
HDLBP-224ENST00000452065 OXER1Q8TDS5 423 aa12.7□□□□□ -0.38
HDLBP-224ENST00000452065 TNFRSF25Q93038 417 aa12.7□□□□□ -0.38
HDLBP-224ENST00000452065 GPRASP2Q96D09 838 aa12.7□□□□□ -0.38
HDLBP-224ENST00000452065 CDHR1Q96JP9 859 aa12.7□□□□□ -0.38
HDLBP-224ENST00000452065 JADE2Q9NQC1 790 aa12.7□□□□□ -0.38
HDLBP-224ENST00000452065 DDX41Q9UJV9 622 aaKnown RBP12.7□□□□□ -0.38
HDLBP-224ENST00000452065 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.69□□□□□ -0.38
HDLBP-224ENST00000452065 POTEFA5A3E0 1075 aa12.69□□□□□ -0.38
HDLBP-224ENST00000452065 BTBD18B2RXH4 712 aa12.69□□□□□ -0.38
HDLBP-224ENST00000452065 ADCY6O43306 1168 aa12.69□□□□□ -0.38
HDLBP-224ENST00000452065 FIBPO43427 364 aa12.69□□□□□ -0.38
HDLBP-224ENST00000452065 TFRCP02786 760 aaKnown RBP12.69□□□□□ -0.38
HDLBP-224ENST00000452065 ITGB5P18084 799 aa12.69□□□□□ -0.38
HDLBP-224ENST00000452065 GJA9P57773 515 aa12.69□□□□□ -0.38
HDLBP-224ENST00000452065 MLLT1Q03111 559 aaPredicted RBP12.69□□□□□ -0.38
HDLBP-224ENST00000452065 NONOQ15233 471 aaKnown RBP eCLIP12.69□□□□□ -0.381e-6■■■■■ 33.1
HDLBP-224ENST00000452065 CEP55Q53EZ4 464 aa12.69□□□□□ -0.38
HDLBP-224ENST00000452065 DIS3L2Q8IYB7 885 aaKnown RBP12.69□□□□□ -0.38
HDLBP-224ENST00000452065 TBCKQ8TEA7 893 aa12.69□□□□□ -0.38
HDLBP-224ENST00000452065 PGBD1Q96JS3 809 aa12.69□□□□□ -0.38
HDLBP-224ENST00000452065 SENP7Q9BQF6 1050 aa12.69□□□□□ -0.38
HDLBP-224ENST00000452065 MXRA8Q9BRK3 442 aa12.69□□□□□ -0.38
HDLBP-224ENST00000452065 UPF3AQ9H1J1 476 aaKnown RBP12.69□□□□□ -0.38
HDLBP-224ENST00000452065 FOXP1Q9H334 677 aaPredicted RBP12.69□□□□□ -0.38
HDLBP-224ENST00000452065 XPNPEP3Q9NQH7 507 aa12.69□□□□□ -0.38
HDLBP-224ENST00000452065 RTEL1Q9NZ71 1219 aa12.69□□□□□ -0.38
HDLBP-224ENST00000452065 KIAA0100Q14667 2235 aaKnown RBP12.68□□□□□ -0.38
HDLBP-224ENST00000452065 CYP3A7-CYP3A51PA0A087WV96 503 aa12.68□□□□□ -0.38
HDLBP-224ENST00000452065 CCDC194A0A1B0GVG4 234 aa12.68□□□□□ -0.38
HDLBP-224ENST00000452065 EDIL3O43854 480 aa12.68□□□□□ -0.38
HDLBP-224ENST00000452065 ADAMTS4O75173 837 aa12.68□□□□□ -0.38
HDLBP-224ENST00000452065 PDIA4P13667 645 aaKnown RBP12.68□□□□□ -0.38
HDLBP-224ENST00000452065 PDCP20941 246 aa12.68□□□□□ -0.38
HDLBP-224ENST00000452065 CYP3A7P24462 503 aa12.68□□□□□ -0.38
HDLBP-224ENST00000452065 U2AF2P26368 475 aaKnown RBP eCLIP12.68□□□□□ -0.382e-9■■■□□ 15.4
HDLBP-224ENST00000452065 CST5P28325 142 aaPredicted RBP12.68□□□□□ -0.38
HDLBP-224ENST00000452065 MTMR1Q13613 665 aa12.68□□□□□ -0.38
HDLBP-224ENST00000452065 TMEM63BQ5T3F8 832 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms