RNA–Protein interactions for RNA: ENST00000449617.5

SEC22C-209, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 2

Gene SEC22C, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-209ENST00000449617 PPP1R13LQ8WUF5 828 aa15.13■□□□□ 0.01
SEC22C-209ENST00000449617 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.13■□□□□ 0.012e-7■□□□□ 8.2
SEC22C-209ENST00000449617 LZTS2Q9BRK4 669 aa15.13■□□□□ 0.01
SEC22C-209ENST00000449617 NOC4LQ9BVI4 516 aaKnown RBP15.13■□□□□ 0.01
SEC22C-209ENST00000449617 SLC12A7Q9Y666 1083 aa15.13■□□□□ 0.01
SEC22C-209ENST00000449617 MRVI1Q9Y6F6 885 aa15.13■□□□□ 0.01
SEC22C-209ENST00000449617 RGS20O76081 388 aa15.12■□□□□ 0.01
SEC22C-209ENST00000449617 MMP3P08254 477 aa15.12■□□□□ 0.01
SEC22C-209ENST00000449617 CALM1P0DP23 149 aa15.12■□□□□ 0.01
SEC22C-209ENST00000449617 CALM2P0DP24 149 aa15.12■□□□□ 0.01
SEC22C-209ENST00000449617 CALM3P0DP25 149 aa15.12■□□□□ 0.01
SEC22C-209ENST00000449617 SMARCA1P28370 1054 aa15.12■□□□□ 0.01
SEC22C-209ENST00000449617 GNAQP50148 359 aa15.12■□□□□ 0.01
SEC22C-209ENST00000449617 SMAD3P84022 425 aaKnown RBP15.12■□□□□ 0.01
SEC22C-209ENST00000449617 FAM47CQ5HY64 1035 aa15.12■□□□□ 0.01
SEC22C-209ENST00000449617 FAM109BQ6ICB4 259 aaPredicted RBP15.12■□□□□ 0.01
SEC22C-209ENST00000449617 C16orf59Q7L2K0 433 aa15.12■□□□□ 0.01
SEC22C-209ENST00000449617 MICU3Q86XE3 530 aa15.12■□□□□ 0.01
SEC22C-209ENST00000449617 RASEFQ8IZ41 740 aa15.12■□□□□ 0.01
SEC22C-209ENST00000449617 CMTR1Q8N1G2 835 aaKnown RBP15.12■□□□□ 0.01
SEC22C-209ENST00000449617 NEK1Q96PY6 1258 aa15.12■□□□□ 0.01
SEC22C-209ENST00000449617 SEC63Q9UGP8 760 aaKnown RBP15.12■□□□□ 0.01
SEC22C-209ENST00000449617 DDX41Q9UJV9 622 aaKnown RBP15.12■□□□□ 0.01
SEC22C-209ENST00000449617 ACRP10323 421 aa15.11■□□□□ 0.01
SEC22C-209ENST00000449617 CYP2C9P11712 490 aa15.11■□□□□ 0.01
SEC22C-209ENST00000449617 CCND2P30279 289 aa15.11■□□□□ 0.01
SEC22C-209ENST00000449617 CCL23P55773 120 aa15.11■□□□□ 0.01
SEC22C-209ENST00000449617 CHMP4BP1P59074 171 aa15.11■□□□□ 0.01
SEC22C-209ENST00000449617 TMEM240Q5SV17 173 aa15.11■□□□□ 0.01
SEC22C-209ENST00000449617 NFRKBQ6P4R8 1299 aa15.11■□□□□ 0.01
SEC22C-209ENST00000449617 VSIG10LQ86VR7 867 aa15.11■□□□□ 0.01
SEC22C-209ENST00000449617 SGMS1Q86VZ5 419 aa15.11■□□□□ 0.01
SEC22C-209ENST00000449617 ZFP91Q96JP5 570 aaPredicted RBP15.11■□□□□ 0.01
SEC22C-209ENST00000449617 TCEANC2Q96MN5 208 aa15.11■□□□□ 0.01
SEC22C-209ENST00000449617 FAM161BQ96MY7 647 aa15.11■□□□□ 0.01
SEC22C-209ENST00000449617 WNT8AQ9H1J5 351 aa15.11■□□□□ 0.01
SEC22C-209ENST00000449617 FRMPD4Q14CM0 1322 aa15.11■□□□□ 0.01
SEC22C-209ENST00000449617 SUPT20HL2P0C7V6 817 aa15.1■□□□□ 0.01
SEC22C-209ENST00000449617 ADCK5Q3MIX3 580 aa15.1■□□□□ 0.01
SEC22C-209ENST00000449617 TSGA10IPQ3SY00 556 aa15.1■□□□□ 0.01
SEC22C-209ENST00000449617 ZNF697Q5TEC3 545 aa15.1■□□□□ 0.01
SEC22C-209ENST00000449617 PSRC1Q6PGN9 363 aaPredicted RBP15.1■□□□□ 0.01
SEC22C-209ENST00000449617 TMTC3Q6ZXV5 915 aa15.1■□□□□ 0.01
SEC22C-209ENST00000449617 FANCBQ8NB91 859 aa15.1■□□□□ 0.01
SEC22C-209ENST00000449617 EMID1Q96A84 441 aaPredicted RBP15.1■□□□□ 0.01
SEC22C-209ENST00000449617 IL23AQ9NPF7 189 aa15.1■□□□□ 0.01
SEC22C-209ENST00000449617 hCG_1642624A0A1W2PR95 340 aa15.09■□□□□ 0.01
SEC22C-209ENST00000449617 SORBS3O60504 671 aa15.09■□□□□ 0.01
SEC22C-209ENST00000449617 UBA1P22314 1058 aaKnown RBP15.09■□□□□ 0.01
SEC22C-209ENST00000449617 EXOSC10Q01780 885 aaKnown RBP15.09■□□□□ 0.01
SEC22C-209ENST00000449617 LAMC2Q13753 1193 aa15.09■□□□□ 0.01
SEC22C-209ENST00000449617 DGKDQ16760 1214 aa15.09■□□□□ 0.01
SEC22C-209ENST00000449617 APOA5Q6Q788 366 aa15.09■□□□□ 0.01
SEC22C-209ENST00000449617 ZNF365Q70YC5 407 aa15.09■□□□□ 0.01
SEC22C-209ENST00000449617 DHX32Q7L7V1 743 aaKnown RBP15.09■□□□□ 0.01
SEC22C-209ENST00000449617 DHX37Q8IY37 1157 aaKnown RBP15.09■□□□□ 0.01
SEC22C-209ENST00000449617 CCDC82Q8N4S0 544 aa15.09■□□□□ 0.01
SEC22C-209ENST00000449617 PPTC7Q8NI37 304 aa15.09■□□□□ 0.01
SEC22C-209ENST00000449617 KAT2BQ92831 832 aa15.09■□□□□ 0.01
SEC22C-209ENST00000449617 GPKOWQ92917 476 aaPredicted RBP eCLIP15.09■□□□□ 0.01
SEC22C-209ENST00000449617 GUCD1Q96NT3 240 aa15.09■□□□□ 0.01
SEC22C-209ENST00000449617 EYSQ5T1H1 3165 aa15.09■□□□□ 0.01
SEC22C-209ENST00000449617 SCN5AQ14524 2016 aa15.09■□□□□ 0.01
SEC22C-209ENST00000449617 NEFLP07196 543 aa15.09■□□□□ 0.01
SEC22C-209ENST00000449617 ZNF286BP0CG31 522 aa15.09■□□□□ 0.01
SEC22C-209ENST00000449617 CASTP20810 708 aaKnown RBP15.09■□□□□ 0.01
SEC22C-209ENST00000449617 PTPN11Q06124 597 aaPredicted RBP15.09■□□□□ 0.01
SEC22C-209ENST00000449617 KRT32Q14532 448 aa15.09■□□□□ 0.01
SEC22C-209ENST00000449617 RASIP1Q5U651 963 aa15.09■□□□□ 0.01
SEC22C-209ENST00000449617 KCNV1Q6PIU1 500 aa15.09■□□□□ 0.01
SEC22C-209ENST00000449617 USP17L6PQ6QN14 398 aa15.09■□□□□ 0.01
SEC22C-209ENST00000449617 SYNE3Q6ZMZ3 975 aa15.09■□□□□ 0.01
SEC22C-209ENST00000449617 SMARCC2Q8TAQ2 1214 aa15.09■□□□□ 0.01
SEC22C-209ENST00000449617 CUL5Q93034 780 aa15.09■□□□□ 0.01
SEC22C-209ENST00000449617 SCLYQ96I15 445 aa15.09■□□□□ 0.01
SEC22C-209ENST00000449617 BRPF3Q9ULD4 1205 aa15.09■□□□□ 0.01
SEC22C-209ENST00000449617 STXBP5LQ9Y2K9 1186 aa15.09■□□□□ 0.01
SEC22C-209ENST00000449617 TANC1Q9C0D5 1861 aa15.08■□□□□ 0.01
SEC22C-209ENST00000449617 DOCK5Q9H7D0 1870 aa15.08■□□□□ 0
SEC22C-209ENST00000449617 PIK3CDO00329 1044 aa15.08■□□□□ 0
SEC22C-209ENST00000449617 MEIS2O14770 477 aa15.08■□□□□ 0
SEC22C-209ENST00000449617 GGPS1O95749 300 aa15.08■□□□□ 0
SEC22C-209ENST00000449617 MRPS9P82933 396 aaKnown RBP15.08■□□□□ 0
SEC22C-209ENST00000449617 SP2Q02086 613 aa15.08■□□□□ 0
SEC22C-209ENST00000449617 CELF3Q5SZQ8 465 aaKnown RBP15.08■□□□□ 0
SEC22C-209ENST00000449617 MYSM1Q5VVJ2 828 aa15.08■□□□□ 0
SEC22C-209ENST00000449617 SPATA33Q96N06 139 aa15.08■□□□□ 0
SEC22C-209ENST00000449617 TRIP12Q14669 1992 aaPredicted RBP15.08■□□□□ 0
SEC22C-209ENST00000449617 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.07■□□□□ 0
SEC22C-209ENST00000449617 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.07■□□□□ 0
SEC22C-209ENST00000449617 F2P00734 622 aa15.07■□□□□ 0
SEC22C-209ENST00000449617 TGFB3P10600 412 aa15.07■□□□□ 0
SEC22C-209ENST00000449617 HOXD8P13378 290 aaPredicted RBP15.07■□□□□ 0
SEC22C-209ENST00000449617 RTN1Q16799 776 aa15.07■□□□□ 0
SEC22C-209ENST00000449617 HSDL1Q3SXM5 330 aa15.07■□□□□ 0
SEC22C-209ENST00000449617 HEATR3Q7Z4Q2 680 aa15.07■□□□□ 0
SEC22C-209ENST00000449617 HERVK_113Q902F9 699 aa15.07■□□□□ 0
SEC22C-209ENST00000449617 VWCEQ96DN2 955 aa15.07■□□□□ 0
SEC22C-209ENST00000449617 INPP4AQ96PE3 977 aaPredicted RBP15.07■□□□□ 0
SEC22C-209ENST00000449617 TTYH1Q9H313 450 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms