RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 CEP55Q53EZ4 464 aa21.85■■□□□ 1.09
RPS28-202ENST00000449223 ARHGEF16Q5VV41 709 aa21.85■■□□□ 1.09
RPS28-202ENST00000449223 IWS1Q96ST2 819 aa21.85■■□□□ 1.09
RPS28-202ENST00000449223 MMP19Q99542 508 aa21.85■■□□□ 1.09
RPS28-202ENST00000449223 MRVI1Q9Y6F6 885 aa21.85■■□□□ 1.09
RPS28-202ENST00000449223 FAM237AA0A1B0GTK4 181 aa21.84■■□□□ 1.09
RPS28-202ENST00000449223 GOLGA6L4A6NEF3 574 aa21.84■■□□□ 1.09
RPS28-202ENST00000449223 MEIS1O00470 390 aa21.84■■□□□ 1.09
RPS28-202ENST00000449223 CMA1P23946 247 aa21.84■■□□□ 1.09
RPS28-202ENST00000449223 SETQ01105 290 aaPredicted RBP21.84■■□□□ 1.09
RPS28-202ENST00000449223 CALCRLQ16602 461 aa21.84■■□□□ 1.09
RPS28-202ENST00000449223 KLHL40Q2TBA0 621 aa21.84■■□□□ 1.09
RPS28-202ENST00000449223 VSIG10LQ86VR7 867 aa21.84■■□□□ 1.09
RPS28-202ENST00000449223 IL31RAQ8NI17 732 aa21.84■■□□□ 1.09
RPS28-202ENST00000449223 ETNPPLQ8TBG4 499 aa21.84■■□□□ 1.09
RPS28-202ENST00000449223 GPT2Q8TD30 523 aa21.84■■□□□ 1.09
RPS28-202ENST00000449223 ADD3Q9UEY8 706 aaKnown RBP21.84■■□□□ 1.09
RPS28-202ENST00000449223 ASTN1O14525 1302 aa21.83■■□□□ 1.09
RPS28-202ENST00000449223 PLXNA1Q9UIW2 1896 aa21.83■■□□□ 1.09
RPS28-202ENST00000449223 POTEB2H3BUK9 544 aa21.83■■□□□ 1.09
RPS28-202ENST00000449223 STAM2O75886 525 aa21.83■■□□□ 1.09
RPS28-202ENST00000449223 EIF2AK2P19525 551 aaKnown RBP21.83■■□□□ 1.09
RPS28-202ENST00000449223 EDNRBP24530 442 aa21.83■■□□□ 1.09
RPS28-202ENST00000449223 MRPS9P82933 396 aaKnown RBP21.83■■□□□ 1.09
RPS28-202ENST00000449223 GRM1Q13255 1194 aa21.83■■□□□ 1.09
RPS28-202ENST00000449223 HAS1Q92839 578 aa21.83■■□□□ 1.09
RPS28-202ENST00000449223 CPA4Q9UI42 421 aa21.83■■□□□ 1.09
RPS28-202ENST00000449223 UBIAD1Q9Y5Z9 338 aa21.83■■□□□ 1.09
RPS28-202ENST00000449223 NR3C2P08235 984 aa21.82■■□□□ 1.08
RPS28-202ENST00000449223 LONP1P36776 959 aaKnown RBP21.82■■□□□ 1.08
RPS28-202ENST00000449223 UBXN2AP68543 259 aa21.82■■□□□ 1.08
RPS28-202ENST00000449223 CNTN2Q02246 1040 aa21.82■■□□□ 1.08
RPS28-202ENST00000449223 IL17AQ16552 155 aa21.82■■□□□ 1.08
RPS28-202ENST00000449223 RESP18Q5W5W9 173 aa21.82■■□□□ 1.08
RPS28-202ENST00000449223 DTHD1Q6ZMT9 781 aa21.82■■□□□ 1.08
RPS28-202ENST00000449223 GPR142Q7Z601 462 aa21.82■■□□□ 1.08
RPS28-202ENST00000449223 PURBQ96QR8 312 aaKnown RBP21.82■■□□□ 1.08
RPS28-202ENST00000449223 MXRA8Q9BRK3 442 aa21.82■■□□□ 1.08
RPS28-202ENST00000449223 CCND2P30279 289 aa21.81■■□□□ 1.08
RPS28-202ENST00000449223 ZNF76P36508 570 aa21.81■■□□□ 1.08
RPS28-202ENST00000449223 VEGFBP49765 207 aa21.81■■□□□ 1.08
RPS28-202ENST00000449223 FXR2P51116 673 aaKnown RBP eCLIP21.81■■□□□ 1.08
RPS28-202ENST00000449223 ALDH5A1P51649 535 aaPredicted RBP21.81■■□□□ 1.08
RPS28-202ENST00000449223 GRIN1Q05586 938 aa21.81■■□□□ 1.08
RPS28-202ENST00000449223 GRB14Q14449 540 aa21.81■■□□□ 1.08
RPS28-202ENST00000449223 PRR16Q569H4 304 aa21.81■■□□□ 1.08
RPS28-202ENST00000449223 SHC4Q6S5L8 630 aa21.81■■□□□ 1.08
RPS28-202ENST00000449223 SLFN12Q8IYM2 578 aa21.81■■□□□ 1.08
RPS28-202ENST00000449223 CYP2W1Q8TAV3 490 aa21.81■■□□□ 1.08
RPS28-202ENST00000449223 MRPS27Q92552 414 aaKnown RBP21.81■■□□□ 1.08
RPS28-202ENST00000449223 FGD4Q96M96 766 aa21.81■■□□□ 1.08
RPS28-202ENST00000449223 FAM20AQ96MK3 541 aa21.81■■□□□ 1.08
RPS28-202ENST00000449223 CLIC6Q96NY7 704 aa21.81■■□□□ 1.08
RPS28-202ENST00000449223 DDX49Q9Y6V7 483 aaKnown RBP21.81■■□□□ 1.08
RPS28-202ENST00000449223 SOWAHBA6NEL2 793 aa21.8■■□□□ 1.08
RPS28-202ENST00000449223 TRAK2O60296 914 aa21.8■■□□□ 1.08
RPS28-202ENST00000449223 ITGB5P18084 799 aa21.8■■□□□ 1.08
RPS28-202ENST00000449223 IGSF22Q8N9C0 903 aa21.8■■□□□ 1.08
RPS28-202ENST00000449223 MORC4Q8TE76 937 aa21.8■■□□□ 1.08
RPS28-202ENST00000449223 AK8Q96MA6 479 aa21.8■■□□□ 1.08
RPS28-202ENST00000449223 INPP4AQ96PE3 977 aaPredicted RBP21.8■■□□□ 1.08
RPS28-202ENST00000449223 CSRNP2Q9H175 543 aa21.8■■□□□ 1.08
RPS28-202ENST00000449223 HPSEQ9Y251 543 aa21.8■■□□□ 1.08
RPS28-202ENST00000449223 IVNS1ABPQ9Y6Y0 642 aa21.8■■□□□ 1.08
RPS28-202ENST00000449223 MGAMO43451 1857 aa21.8■■□□□ 1.08
RPS28-202ENST00000449223 VWA3AA6NCI4 1184 aa21.8■■□□□ 1.08
RPS28-202ENST00000449223 PDIA5Q14554 519 aa21.8■■□□□ 1.08
RPS28-202ENST00000449223 PLEKHH3Q7Z736 793 aa21.8■■□□□ 1.08
RPS28-202ENST00000449223 CCAR1Q8IX12 1150 aaKnown RBP21.8■■□□□ 1.08
RPS28-202ENST00000449223 JADE2Q9NQC1 790 aa21.8■■□□□ 1.08
RPS28-202ENST00000449223 SLC15A5A6NIM6 579 aa21.79■■□□□ 1.08
RPS28-202ENST00000449223 B4DLN1 442 aa21.79■■□□□ 1.08
RPS28-202ENST00000449223 MSH4O15457 936 aa21.79■■□□□ 1.08
RPS28-202ENST00000449223 MAFGO15525 162 aa21.79■■□□□ 1.08
RPS28-202ENST00000449223 ADORA2AP29274 412 aa21.79■■□□□ 1.08
RPS28-202ENST00000449223 ZNF792Q3KQV3 632 aa21.79■■□□□ 1.08
RPS28-202ENST00000449223 WDR78Q5VTH9 848 aa21.79■■□□□ 1.08
RPS28-202ENST00000449223 ZNF467Q7Z7K2 595 aaPredicted RBP21.79■■□□□ 1.08
RPS28-202ENST00000449223 PLA2G4DQ86XP0 818 aa21.79■■□□□ 1.08
RPS28-202ENST00000449223 ENGASEQ8NFI3 743 aa21.79■■□□□ 1.08
RPS28-202ENST00000449223 GPRASP2Q96D09 838 aa21.79■■□□□ 1.08
RPS28-202ENST00000449223 DIS3Q9Y2L1 958 aaKnown RBP21.79■■□□□ 1.08
RPS28-202ENST00000449223 KIAA1217Q5T5P2 1943 aa21.78■■□□□ 1.08
RPS28-202ENST00000449223 SLC5A5Q92911 643 aa21.78■■□□□ 1.08
RPS28-202ENST00000449223 MPHOSPH6Q99547 160 aaKnown RBP21.78■■□□□ 1.08
RPS28-202ENST00000449223 GOLPH3LQ9H4A5 285 aa21.78■■□□□ 1.08
RPS28-202ENST00000449223 EIF3JO75822 258 aaKnown RBP21.77■■□□□ 1.08
RPS28-202ENST00000449223 PGK2P07205 417 aa21.77■■□□□ 1.08
RPS28-202ENST00000449223 FAM160A1Q05DH4 1040 aa21.77■■□□□ 1.08
RPS28-202ENST00000449223 SNW1Q13573 536 aaKnown RBP21.77■■□□□ 1.08
RPS28-202ENST00000449223 STXBP2Q15833 593 aa21.77■■□□□ 1.08
RPS28-202ENST00000449223 TMEM266Q2M3C6 531 aa21.77■■□□□ 1.08
RPS28-202ENST00000449223 MORN1Q5T089 497 aa21.77■■□□□ 1.08
RPS28-202ENST00000449223 FSIP1Q8NA03 581 aa21.77■■□□□ 1.08
RPS28-202ENST00000449223 RAB34Q9BZG1 259 aa21.77■■□□□ 1.08
RPS28-202ENST00000449223 TTC12Q9H892 705 aaPredicted RBP21.77■■□□□ 1.08
RPS28-202ENST00000449223 KCNH7Q9NS40 1196 aa21.77■■□□□ 1.08
RPS28-202ENST00000449223 DOCK3Q8IZD9 2030 aa21.77■■□□□ 1.08
RPS28-202ENST00000449223 RGS20O76081 388 aa21.76■■□□□ 1.07
RPS28-202ENST00000449223 LIG1P18858 919 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms