RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 RAD9AQ99638 391 aa21.1■□□□□ 0.97
CHCHD3-203ENST00000448878 SUGCTQ9HAC7 445 aa21.1■□□□□ 0.97
CHCHD3-203ENST00000448878 LMCD1Q9NZU5 365 aa21.1■□□□□ 0.97
CHCHD3-203ENST00000448878 TET1Q8NFU7 2136 aa21.1■□□□□ 0.97
CHCHD3-203ENST00000448878 COL4A4P53420 1690 aaPredicted RBP21.09■□□□□ 0.97
CHCHD3-203ENST00000448878 A0A0D9SFI3 127 aa21.09■□□□□ 0.97
CHCHD3-203ENST00000448878 ABHD14A-ACY1A0A1B0GW23 586 aa21.09■□□□□ 0.97
CHCHD3-203ENST00000448878 NBNO60934 754 aa21.09■□□□□ 0.97
CHCHD3-203ENST00000448878 HOXD11P31277 338 aaPredicted RBP21.09■□□□□ 0.97
CHCHD3-203ENST00000448878 ARHGAP1Q07960 439 aa21.09■□□□□ 0.97
CHCHD3-203ENST00000448878 CDC37Q16543 378 aaPredicted RBP21.09■□□□□ 0.97
CHCHD3-203ENST00000448878 ARHGEF16Q5VV41 709 aa21.09■□□□□ 0.97
CHCHD3-203ENST00000448878 SESTD1Q86VW0 696 aa21.09■□□□□ 0.97
CHCHD3-203ENST00000448878 RGS22Q8NE09 1264 aa21.09■□□□□ 0.97
CHCHD3-203ENST00000448878 KAT2BQ92831 832 aa21.09■□□□□ 0.97
CHCHD3-203ENST00000448878 RMDN3Q96TC7 470 aa21.09■□□□□ 0.97
CHCHD3-203ENST00000448878 GTF2IRD1Q9UHL9 959 aa21.09■□□□□ 0.97
CHCHD3-203ENST00000448878 ABCB11O95342 1321 aa21.08■□□□□ 0.97
CHCHD3-203ENST00000448878 GJB5O95377 273 aa21.08■□□□□ 0.97
CHCHD3-203ENST00000448878 SNHG28P0DPA3 235 aa21.08■□□□□ 0.97
CHCHD3-203ENST00000448878 PSEN2P49810 448 aa21.08■□□□□ 0.97
CHCHD3-203ENST00000448878 MCF2L2Q86YR7 1114 aa21.08■□□□□ 0.97
CHCHD3-203ENST00000448878 DHX37Q8IY37 1157 aaKnown RBP21.08■□□□□ 0.97
CHCHD3-203ENST00000448878 SYTL5Q8TDW5 730 aaPredicted RBP21.08■□□□□ 0.97
CHCHD3-203ENST00000448878 CTAGE1Q96RT6 745 aa21.08■□□□□ 0.97
CHCHD3-203ENST00000448878 KATNAL1Q9BW62 490 aa21.08■□□□□ 0.97
CHCHD3-203ENST00000448878 VAT1LQ9HCJ6 419 aa21.08■□□□□ 0.97
CHCHD3-203ENST00000448878 PTPRSQ13332 1948 aa21.08■□□□□ 0.96
CHCHD3-203ENST00000448878 NCOR1O75376 2440 aa21.07■□□□□ 0.96
CHCHD3-203ENST00000448878 LINC01553A4QN01 128 aa21.07■□□□□ 0.96
CHCHD3-203ENST00000448878 TRIM6-TRIM34B2RNG4 842 aa21.07■□□□□ 0.96
CHCHD3-203ENST00000448878 RBAK-RBAKDNI3L0D1 243 aa21.07■□□□□ 0.96
CHCHD3-203ENST00000448878 SORBS3O60504 671 aa21.07■□□□□ 0.96
CHCHD3-203ENST00000448878 EIF2AK2P19525 551 aaKnown RBP21.07■□□□□ 0.96
CHCHD3-203ENST00000448878 SSTR3P32745 418 aaPredicted RBP21.07■□□□□ 0.96
CHCHD3-203ENST00000448878 ERVK-21P61565 698 aa21.07■□□□□ 0.96
CHCHD3-203ENST00000448878 TCTN1Q2MV58 587 aa21.07■□□□□ 0.96
CHCHD3-203ENST00000448878 ESR2Q92731 530 aa21.07■□□□□ 0.96
CHCHD3-203ENST00000448878 IWS1Q96ST2 819 aa21.07■□□□□ 0.96
CHCHD3-203ENST00000448878 RNF41Q9H4P4 317 aaPredicted RBP21.07■□□□□ 0.96
CHCHD3-203ENST00000448878 UBE2ZQ9H832 354 aaPredicted RBP21.07■□□□□ 0.96
CHCHD3-203ENST00000448878 MRVI1Q9Y6F6 885 aa21.07■□□□□ 0.96
CHCHD3-203ENST00000448878 GPR37L1O60883 481 aa21.06■□□□□ 0.96
CHCHD3-203ENST00000448878 EFCAB14O75071 495 aa21.06■□□□□ 0.96
CHCHD3-203ENST00000448878 CXCL10P02778 98 aa21.06■□□□□ 0.96
CHCHD3-203ENST00000448878 ZNF286BP0CG31 522 aa21.06■□□□□ 0.96
CHCHD3-203ENST00000448878 KCNA5P22460 613 aa21.06■□□□□ 0.96
CHCHD3-203ENST00000448878 NMIQ13287 307 aaPredicted RBP21.06■□□□□ 0.96
CHCHD3-203ENST00000448878 PTK7Q13308 1070 aa21.06■□□□□ 0.96
CHCHD3-203ENST00000448878 MFSD10Q14728 455 aa21.06■□□□□ 0.96
CHCHD3-203ENST00000448878 KIAA0753Q2KHM9 967 aa21.06■□□□□ 0.96
CHCHD3-203ENST00000448878 ZNF618Q5T7W0 954 aa21.06■□□□□ 0.96
CHCHD3-203ENST00000448878 ZNF589Q86UQ0 364 aaPredicted RBP21.06■□□□□ 0.96
CHCHD3-203ENST00000448878 ADGRF4Q8IZF3 695 aa21.06■□□□□ 0.96
CHCHD3-203ENST00000448878 RILPL2Q969X0 211 aa21.06■□□□□ 0.96
CHCHD3-203ENST00000448878 KAT14Q9H8E8 782 aa21.06■□□□□ 0.96
CHCHD3-203ENST00000448878 CD320Q9NPF0 282 aa21.06■□□□□ 0.96
CHCHD3-203ENST00000448878 COL20A1Q9P218 1284 aa21.06■□□□□ 0.96
CHCHD3-203ENST00000448878 DDX41Q9UJV9 622 aaKnown RBP21.06■□□□□ 0.96
CHCHD3-203ENST00000448878 ARIH1Q9Y4X5 557 aaPredicted RBP21.06■□□□□ 0.96
CHCHD3-203ENST00000448878 CFBP00751 764 aa21.05■□□□□ 0.96
CHCHD3-203ENST00000448878 PCP11498 1178 aaKnown RBP21.05■□□□□ 0.96
CHCHD3-203ENST00000448878 ZNF200P98182 395 aaPredicted RBP21.05■□□□□ 0.96
CHCHD3-203ENST00000448878 LAMC2Q13753 1193 aa21.05■□□□□ 0.96
CHCHD3-203ENST00000448878 TBC1D10CQ8IV04 446 aa21.05■□□□□ 0.96
CHCHD3-203ENST00000448878 MYOCDQ8IZQ8 938 aa21.05■□□□□ 0.96
CHCHD3-203ENST00000448878 PNMA1Q8ND90 353 aa21.05■□□□□ 0.96
CHCHD3-203ENST00000448878 FBXO22Q8NEZ5 403 aa21.05■□□□□ 0.96
CHCHD3-203ENST00000448878 MRPL11Q9Y3B7 192 aaKnown RBP21.05■□□□□ 0.96
CHCHD3-203ENST00000448878 SALL3Q9BXA9 1300 aa21.04■□□□□ 0.96
CHCHD3-203ENST00000448878 PI4K2BG5E9Z4 385 aa21.04■□□□□ 0.96
CHCHD3-203ENST00000448878 ZNF213O14771 459 aa21.04■□□□□ 0.96
CHCHD3-203ENST00000448878 EIF3JO75822 258 aaKnown RBP21.04■□□□□ 0.96
CHCHD3-203ENST00000448878 PDE1AP54750 535 aa21.04■□□□□ 0.96
CHCHD3-203ENST00000448878 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.04■□□□□ 0.962e-8■■■■■ 44.9
CHCHD3-203ENST00000448878 EP400NLQ6ZTU2 488 aa21.04■□□□□ 0.96
CHCHD3-203ENST00000448878 IQCA1Q86XH1 822 aa21.04■□□□□ 0.96
CHCHD3-203ENST00000448878 FBXO11Q86XK2 927 aa21.04■□□□□ 0.96
CHCHD3-203ENST00000448878 DGKHQ86XP1 1220 aa21.04■□□□□ 0.96
CHCHD3-203ENST00000448878 UIMC1Q96RL1 719 aa21.04■□□□□ 0.96
CHCHD3-203ENST00000448878 C17orf80Q9BSJ5 609 aa21.04■□□□□ 0.96
CHCHD3-203ENST00000448878 C11orf16Q9NQ32 467 aa21.04■□□□□ 0.96
CHCHD3-203ENST00000448878 INSL6Q9Y581 213 aa21.04■□□□□ 0.96
CHCHD3-203ENST00000448878 CCDC171Q6TFL3 1326 aa21.04■□□□□ 0.96
CHCHD3-203ENST00000448878 AMHP03971 560 aa21.03■□□□□ 0.96
CHCHD3-203ENST00000448878 NR3C2P08235 984 aa21.03■□□□□ 0.96
CHCHD3-203ENST00000448878 MYCLP12524 364 aaPredicted RBP21.03■□□□□ 0.96
CHCHD3-203ENST00000448878 RBL2Q08999 1139 aa21.03■□□□□ 0.96
CHCHD3-203ENST00000448878 QRICH1Q2TAL8 776 aa21.03■□□□□ 0.96
CHCHD3-203ENST00000448878 GJD3Q8N144 294 aa21.03■□□□□ 0.96
CHCHD3-203ENST00000448878 NEDD4P46934 1319 aa21.03■□□□□ 0.96
CHCHD3-203ENST00000448878 KDM4AO75164 1064 aa21.02■□□□□ 0.96
CHCHD3-203ENST00000448878 LGR5O75473 907 aa21.02■□□□□ 0.96
CHCHD3-203ENST00000448878 THPOP40225 353 aa21.02■□□□□ 0.96
CHCHD3-203ENST00000448878 MFAP1P55081 439 aaKnown RBP21.02■□□□□ 0.96
CHCHD3-203ENST00000448878 CCDC178Q5BJE1 867 aa21.02■□□□□ 0.96
CHCHD3-203ENST00000448878 PPTC7Q8NI37 304 aa21.02■□□□□ 0.96
CHCHD3-203ENST00000448878 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.02■□□□□ 0.96
CHCHD3-203ENST00000448878 WNT8BQ93098 351 aa21.02■□□□□ 0.96
CHCHD3-203ENST00000448878 ZMYM6O95789 1325 aa21.02■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms