RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 PCDHA6Q9UN73 950 aa16.07■□□□□ 0.16
GTF3C3-206ENST00000448539 PCDHA8Q9Y5H6 950 aa16.07■□□□□ 0.16
GTF3C3-206ENST00000448539 LCTP09848 1927 aa16.07■□□□□ 0.16
GTF3C3-206ENST00000448539 STK36Q9NRP7 1315 aa16.06■□□□□ 0.16
GTF3C3-206ENST00000448539 SYNRGQ9UMZ2 1314 aa16.06■□□□□ 0.16
GTF3C3-206ENST00000448539 RBM47A0AV96 593 aaKnown RBP16.06■□□□□ 0.16
GTF3C3-206ENST00000448539 DNM1LO00429 736 aa16.06■□□□□ 0.16
GTF3C3-206ENST00000448539 NKRFO15226 690 aaKnown RBP eCLIP16.06■□□□□ 0.16
GTF3C3-206ENST00000448539 DYNC1LI2O43237 492 aaPredicted RBP16.06■□□□□ 0.16
GTF3C3-206ENST00000448539 STAM2O75886 525 aa16.06■□□□□ 0.16
GTF3C3-206ENST00000448539 C6orf222P0C671 652 aaPredicted RBP16.06■□□□□ 0.16
GTF3C3-206ENST00000448539 SMPD1P17405 629 aa16.06■□□□□ 0.16
GTF3C3-206ENST00000448539 MCM2P49736 904 aa16.06■□□□□ 0.16
GTF3C3-206ENST00000448539 AP3B2Q13367 1082 aa16.06■□□□□ 0.16
GTF3C3-206ENST00000448539 LRRC41Q15345 812 aa16.06■□□□□ 0.16
GTF3C3-206ENST00000448539 GNPTABQ3T906 1256 aa16.06■□□□□ 0.16
GTF3C3-206ENST00000448539 DUSP28Q4G0W2 176 aa16.06■□□□□ 0.16
GTF3C3-206ENST00000448539 MCTP2Q6DN12 878 aa16.06■□□□□ 0.16
GTF3C3-206ENST00000448539 XRRA1Q6P2D8 792 aa16.06■□□□□ 0.16
GTF3C3-206ENST00000448539 DIS3LQ8TF46 1054 aaKnown RBP16.06■□□□□ 0.16
GTF3C3-206ENST00000448539 ZMYND12Q9H0C1 365 aa16.06■□□□□ 0.16
GTF3C3-206ENST00000448539 C11orf49Q9H6J7 331 aa16.06■□□□□ 0.16
GTF3C3-206ENST00000448539 Q9Y3F1 56 aa16.06■□□□□ 0.16
GTF3C3-206ENST00000448539 MCM3APO60318 1980 aa16.06■□□□□ 0.16
GTF3C3-206ENST00000448539 FRMPD4Q14CM0 1322 aa16.05■□□□□ 0.16
GTF3C3-206ENST00000448539 ZEB2O60315 1214 aa16.05■□□□□ 0.16
GTF3C3-206ENST00000448539 TXNP10599 105 aaKnown RBP16.05■□□□□ 0.16
GTF3C3-206ENST00000448539 KCNV1Q6PIU1 500 aa16.05■□□□□ 0.16
GTF3C3-206ENST00000448539 CCDC83Q8IWF9 413 aa16.05■□□□□ 0.16
GTF3C3-206ENST00000448539 FAM177A1Q8N128 213 aaPredicted RBP16.05■□□□□ 0.16
GTF3C3-206ENST00000448539 IL31RAQ8NI17 732 aa16.05■□□□□ 0.16
GTF3C3-206ENST00000448539 HTATIP2Q9BUP3 242 aa16.05■□□□□ 0.16
GTF3C3-206ENST00000448539 GNEQ9Y223 722 aaKnown RBP16.05■□□□□ 0.16
GTF3C3-206ENST00000448539 MRVI1Q9Y6F6 885 aa16.05■□□□□ 0.16
GTF3C3-206ENST00000448539 ADCY6O43306 1168 aa16.04■□□□□ 0.16
GTF3C3-206ENST00000448539 CTDNEP1O95476 244 aa16.04■□□□□ 0.16
GTF3C3-206ENST00000448539 GJA9P57773 515 aa16.04■□□□□ 0.16
GTF3C3-206ENST00000448539 BRDTQ58F21 947 aaPredicted RBP16.04■□□□□ 0.16
GTF3C3-206ENST00000448539 GNASQ5JWF2 1037 aa16.04■□□□□ 0.16
GTF3C3-206ENST00000448539 JAKMIP3Q5VZ66 844 aa16.04■□□□□ 0.16
GTF3C3-206ENST00000448539 PCNX4Q63HM2 1172 aa16.04■□□□□ 0.16
GTF3C3-206ENST00000448539 UBE2Q1Q7Z7E8 422 aa16.04■□□□□ 0.16
GTF3C3-206ENST00000448539 REXO1Q8N1G1 1221 aaKnown RBP16.04■□□□□ 0.16
GTF3C3-206ENST00000448539 PCSK9Q8NBP7 692 aaKnown RBP16.04■□□□□ 0.16
GTF3C3-206ENST00000448539 ANO3Q9BYT9 981 aa16.04■□□□□ 0.16
GTF3C3-206ENST00000448539 SENP6Q9GZR1 1112 aaPredicted RBP16.04■□□□□ 0.16
GTF3C3-206ENST00000448539 UPF3AQ9H1J1 476 aaKnown RBP16.04■□□□□ 0.16
GTF3C3-206ENST00000448539 ADAMTS4O75173 837 aa16.03■□□□□ 0.16
GTF3C3-206ENST00000448539 CLK2P49760 499 aaKnown RBP16.03■□□□□ 0.16
GTF3C3-206ENST00000448539 MNX1P50219 401 aaPredicted RBP16.03■□□□□ 0.16
GTF3C3-206ENST00000448539 HABP4Q5JVS0 413 aaKnown RBP16.03■□□□□ 0.16
GTF3C3-206ENST00000448539 GALNT17Q6IS24 598 aa16.03■□□□□ 0.16
GTF3C3-206ENST00000448539 NLRX1Q86UT6 975 aa16.03■□□□□ 0.16
GTF3C3-206ENST00000448539 NSUN7Q8NE18 718 aaKnown RBP16.03■□□□□ 0.16
GTF3C3-206ENST00000448539 OR6J1Q8NGC5 347 aa16.03■□□□□ 0.16
GTF3C3-206ENST00000448539 ZFP91Q96JP5 570 aaPredicted RBP16.03■□□□□ 0.16
GTF3C3-206ENST00000448539 PGBD1Q96JS3 809 aa16.03■□□□□ 0.16
GTF3C3-206ENST00000448539 AIFM3Q96NN9 605 aa16.03■□□□□ 0.16
GTF3C3-206ENST00000448539 TSEN34Q9BSV6 310 aaKnown RBP16.03■□□□□ 0.16
GTF3C3-206ENST00000448539 ALG1Q9BT22 464 aa16.03■□□□□ 0.16
GTF3C3-206ENST00000448539 TMEM260Q9NX78 707 aa16.03■□□□□ 0.16
GTF3C3-206ENST00000448539 RTEL1Q9NZ71 1219 aa16.03■□□□□ 0.16
GTF3C3-206ENST00000448539 PCDHA4Q9UN74 947 aa16.03■□□□□ 0.16
GTF3C3-206ENST00000448539 MOXD2PA6NHM9 499 aa16.02■□□□□ 0.16
GTF3C3-206ENST00000448539 ARIH2O95376 493 aa16.02■□□□□ 0.16
GTF3C3-206ENST00000448539 GH1P01241 217 aa16.02■□□□□ 0.16
GTF3C3-206ENST00000448539 CST5P28325 142 aaPredicted RBP16.02■□□□□ 0.16
GTF3C3-206ENST00000448539 CPT1AP50416 773 aa16.02■□□□□ 0.16
GTF3C3-206ENST00000448539 MRPS9P82933 396 aaKnown RBP16.02■□□□□ 0.16
GTF3C3-206ENST00000448539 TRIM29Q14134 588 aa16.02■□□□□ 0.16
GTF3C3-206ENST00000448539 KCNA10Q16322 511 aa16.02■□□□□ 0.16
GTF3C3-206ENST00000448539 FSCN1Q16658 493 aaKnown RBP16.02■□□□□ 0.16
GTF3C3-206ENST00000448539 LY6KQ17RY6 165 aa16.02■□□□□ 0.16
GTF3C3-206ENST00000448539 KLHDC9Q8NEP7 349 aa16.02■□□□□ 0.16
GTF3C3-206ENST00000448539 LLPHQ9BRT6 129 aaKnown RBP16.02■□□□□ 0.16
GTF3C3-206ENST00000448539 LRRC37A2A6NM11 1700 aa16.02■□□□□ 0.15
GTF3C3-206ENST00000448539 MYADML2A6NDP7 307 aa16.01■□□□□ 0.15
GTF3C3-206ENST00000448539 H0YGN5 161 aa16.01■□□□□ 0.15
GTF3C3-206ENST00000448539 FIBPO43427 364 aa16.01■□□□□ 0.15
GTF3C3-206ENST00000448539 JAK2O60674 1132 aa16.01■□□□□ 0.15
GTF3C3-206ENST00000448539 DTNBO60941 627 aa16.01■□□□□ 0.15
GTF3C3-206ENST00000448539 TGFB3P10600 412 aa16.01■□□□□ 0.15
GTF3C3-206ENST00000448539 ZNF76P36508 570 aa16.01■□□□□ 0.15
GTF3C3-206ENST00000448539 HMGN5P82970 282 aaKnown RBP16.01■□□□□ 0.15
GTF3C3-206ENST00000448539 BEX3Q00994 111 aa16.01■□□□□ 0.15
GTF3C3-206ENST00000448539 TMEM63BQ5T3F8 832 aa16.01■□□□□ 0.15
GTF3C3-206ENST00000448539 CCDC62Q6P9F0 684 aa16.01■□□□□ 0.15
GTF3C3-206ENST00000448539 DHX37Q8IY37 1157 aaKnown RBP16.01■□□□□ 0.15
GTF3C3-206ENST00000448539 BLIDQ8IZY5 108 aa16.01■□□□□ 0.15
GTF3C3-206ENST00000448539 FAM184AQ8NB25 1140 aa16.01■□□□□ 0.15
GTF3C3-206ENST00000448539 DPF3Q92784 378 aa16.01■□□□□ 0.15
GTF3C3-206ENST00000448539 COPS5Q92905 334 aa16.01■□□□□ 0.15
GTF3C3-206ENST00000448539 FERMT2Q96AC1 680 aa16.01■□□□□ 0.15
GTF3C3-206ENST00000448539 VTI1AQ96AJ9 217 aa16.01■□□□□ 0.15
GTF3C3-206ENST00000448539 CDHR1Q96JP9 859 aa16.01■□□□□ 0.15
GTF3C3-206ENST00000448539 INPP4AQ96PE3 977 aaPredicted RBP16.01■□□□□ 0.15
GTF3C3-206ENST00000448539 BRMS1Q9HCU9 246 aa16.01■□□□□ 0.15
GTF3C3-206ENST00000448539 DDX41Q9UJV9 622 aaKnown RBP16.01■□□□□ 0.15
GTF3C3-206ENST00000448539 PHF24Q9UPV7 400 aa16.01■□□□□ 0.15
GTF3C3-206ENST00000448539 RGS20O76081 388 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms