RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 IQCA1LA6NCM1 817 aa10.03□□□□□ -0.8
SMC6-207ENST00000448223 CFAP73A6NFT4 308 aa10.03□□□□□ -0.8
SMC6-207ENST00000448223 BCAMP50895 628 aa10.03□□□□□ -0.8
SMC6-207ENST00000448223 CCZ1BP86790 482 aa10.03□□□□□ -0.8
SMC6-207ENST00000448223 CCZ1P86791 482 aaPredicted RBP10.03□□□□□ -0.8
SMC6-207ENST00000448223 KLC1Q07866 573 aa10.03□□□□□ -0.8
SMC6-207ENST00000448223 POSTNQ15063 836 aa10.03□□□□□ -0.8
SMC6-207ENST00000448223 E4F1Q66K89 784 aaPredicted RBP10.03□□□□□ -0.8
SMC6-207ENST00000448223 CC2D1AQ6P1N0 951 aaPredicted RBP10.03□□□□□ -0.8
SMC6-207ENST00000448223 TEX9Q8N6V9 391 aa10.03□□□□□ -0.8
SMC6-207ENST00000448223 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.03□□□□□ -0.8
SMC6-207ENST00000448223 UHMK1Q8TAS1 419 aaKnown RBP10.03□□□□□ -0.8
SMC6-207ENST00000448223 C19orf44Q9H6X5 657 aa10.03□□□□□ -0.8
SMC6-207ENST00000448223 HARSP12081 509 aaKnown RBP10.02□□□□□ -0.8
SMC6-207ENST00000448223 PDE6AP16499 860 aa10.02□□□□□ -0.8
SMC6-207ENST00000448223 CMA1P23946 247 aa10.02□□□□□ -0.8
SMC6-207ENST00000448223 CDC27P30260 824 aa10.02□□□□□ -0.8
SMC6-207ENST00000448223 RAD23BP54727 409 aa10.02□□□□□ -0.8
SMC6-207ENST00000448223 KCNQ4P56696 695 aa10.02□□□□□ -0.8
SMC6-207ENST00000448223 CYB5R4Q7L1T6 521 aa10.02□□□□□ -0.8
SMC6-207ENST00000448223 TBC1D10CQ8IV04 446 aa10.02□□□□□ -0.8
SMC6-207ENST00000448223 DPH5Q9H2P9 285 aa10.02□□□□□ -0.8
SMC6-207ENST00000448223 TAB2Q9NYJ8 693 aa10.02□□□□□ -0.8
SMC6-207ENST00000448223 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.02□□□□□ -0.8
SMC6-207ENST00000448223 ZNF229Q9UJW7 825 aa10.02□□□□□ -0.8
SMC6-207ENST00000448223 STX8Q9UNK0 236 aa10.02□□□□□ -0.8
SMC6-207ENST00000448223 DIP2BQ9P265 1576 aa10.02□□□□□ -0.8
SMC6-207ENST00000448223 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.02□□□□□ -0.8
SMC6-207ENST00000448223 ZMYND10O75800 440 aa10.02□□□□□ -0.81
SMC6-207ENST00000448223 KRT3P12035 628 aa10.02□□□□□ -0.81
SMC6-207ENST00000448223 TNFAIP3P21580 790 aa10.02□□□□□ -0.81
SMC6-207ENST00000448223 ASIC2Q16515 512 aa10.02□□□□□ -0.81
SMC6-207ENST00000448223 OR8K1Q8NGG5 319 aa10.02□□□□□ -0.81
SMC6-207ENST00000448223 ATP6V0A1Q93050 837 aa10.02□□□□□ -0.81
SMC6-207ENST00000448223 ETAA1Q9NY74 926 aa10.02□□□□□ -0.81
SMC6-207ENST00000448223 CEP55Q53EZ4 464 aa10.02□□□□□ -0.81
SMC6-207ENST00000448223 ATG9AQ7Z3C6 839 aa10.02□□□□□ -0.81
SMC6-207ENST00000448223 DZIP3Q86Y13 1208 aaKnown RBP10.02□□□□□ -0.81
SMC6-207ENST00000448223 TRIML1Q8N9V2 468 aa10.02□□□□□ -0.81
SMC6-207ENST00000448223 SPATA17Q96L03 361 aa10.02□□□□□ -0.81
SMC6-207ENST00000448223 ALDH8A1Q9H2A2 487 aaPredicted RBP10.02□□□□□ -0.81
SMC6-207ENST00000448223 ATP11BQ9Y2G3 1177 aa10.02□□□□□ -0.81
SMC6-207ENST00000448223 GIPC1O14908 333 aa10.02□□□□□ -0.81
SMC6-207ENST00000448223 ATP5HO75947 161 aa10.02□□□□□ -0.81
SMC6-207ENST00000448223 LMNB1P20700 586 aa10.02□□□□□ -0.81
SMC6-207ENST00000448223 MTF1Q14872 753 aa10.02□□□□□ -0.81
SMC6-207ENST00000448223 TSGA10IPQ3SY00 556 aa10.02□□□□□ -0.81
SMC6-207ENST00000448223 IFIT1BQ5T764 474 aaKnown RBP10.02□□□□□ -0.81
SMC6-207ENST00000448223 ARHGEF18Q6ZSZ5 1173 aa10.02□□□□□ -0.81
SMC6-207ENST00000448223 TTLL11Q8NHH1 800 aa10.02□□□□□ -0.81
SMC6-207ENST00000448223 SH3GL1Q99961 368 aa10.02□□□□□ -0.81
SMC6-207ENST00000448223 C10orf88Q9H8K7 445 aa10.02□□□□□ -0.81
SMC6-207ENST00000448223 MKNK2Q9HBH9 465 aa10.02□□□□□ -0.81
SMC6-207ENST00000448223 PIH1D3Q9NQM4 214 aaKnown RBP10.02□□□□□ -0.81
SMC6-207ENST00000448223 MYO1AQ9UBC5 1043 aa10.02□□□□□ -0.81
SMC6-207ENST00000448223 WDR46O15213 610 aaKnown RBP10.01□□□□□ -0.81
SMC6-207ENST00000448223 APOA1P02647 267 aa10.01□□□□□ -0.81
SMC6-207ENST00000448223 MCAMP43121 646 aa10.01□□□□□ -0.81
SMC6-207ENST00000448223 SLC39A14Q15043 492 aa10.01□□□□□ -0.81
SMC6-207ENST00000448223 RBM43Q6ZSC3 357 aaKnown RBP10.01□□□□□ -0.81
SMC6-207ENST00000448223 RUNDC3BQ96NL0 473 aa10.01□□□□□ -0.81
SMC6-207ENST00000448223 NDEL1Q9GZM8 345 aa10.01□□□□□ -0.81
SMC6-207ENST00000448223 NPHP4O75161 1426 aaPredicted RBP10.01□□□□□ -0.81
SMC6-207ENST00000448223 TSPY2A6NKD2 308 aa10.01□□□□□ -0.81
SMC6-207ENST00000448223 ESRRAP11474 423 aaPredicted RBP10.01□□□□□ -0.81
SMC6-207ENST00000448223 FAM47AQ5JRC9 791 aa10.01□□□□□ -0.81
SMC6-207ENST00000448223 KSR1Q8IVT5 923 aa10.01□□□□□ -0.81
SMC6-207ENST00000448223 ARL10Q8N8L6 244 aa10.01□□□□□ -0.81
SMC6-207ENST00000448223 IFT122Q9HBG6 1241 aa10.01□□□□□ -0.81
SMC6-207ENST00000448223 SEC31BQ9NQW1 1179 aa10.01□□□□□ -0.81
SMC6-207ENST00000448223 FGFR1OP2Q9NVK5 253 aa10.01□□□□□ -0.81
SMC6-207ENST00000448223 ZSWIM5Q9P217 1185 aa10.01□□□□□ -0.81
SMC6-207ENST00000448223 PCDHB6Q9Y5E3 794 aa10.01□□□□□ -0.81
SMC6-207ENST00000448223 DIP2AQ14689 1571 aa10.01□□□□□ -0.81
SMC6-207ENST00000448223 KCNK3O14649 394 aa10.01□□□□□ -0.81
SMC6-207ENST00000448223 SUPT3HO75486 399 aa10.01□□□□□ -0.81
SMC6-207ENST00000448223 KRT5P13647 590 aa10.01□□□□□ -0.81
SMC6-207ENST00000448223 IL2RBP14784 551 aa10.01□□□□□ -0.81
SMC6-207ENST00000448223 SERPINB3P29508 390 aa10.01□□□□□ -0.81
SMC6-207ENST00000448223 GUCY1A2P33402 732 aa10.01□□□□□ -0.81
SMC6-207ENST00000448223 DRP2Q13474 957 aa10.01□□□□□ -0.81
SMC6-207ENST00000448223 TCIRG1Q13488 830 aa10.01□□□□□ -0.81
SMC6-207ENST00000448223 HLFQ16534 295 aa10.01□□□□□ -0.81
SMC6-207ENST00000448223 MUM1L1Q5H9M0 696 aa10.01□□□□□ -0.81
SMC6-207ENST00000448223 PIK3AP1Q6ZUJ8 805 aa10.01□□□□□ -0.81
SMC6-207ENST00000448223 USP49Q70CQ1 688 aa10.01□□□□□ -0.81
SMC6-207ENST00000448223 RSPH3Q86UC2 560 aa10.01□□□□□ -0.81
SMC6-207ENST00000448223 WARS2Q9UGM6 360 aaKnown RBP10.01□□□□□ -0.81
SMC6-207ENST00000448223 SOWAHDA6NJG2 315 aa10.01□□□□□ -0.81
SMC6-207ENST00000448223 MAPK13O15264 365 aa10.01□□□□□ -0.81
SMC6-207ENST00000448223 THAP12O43422 761 aa10.01□□□□□ -0.81
SMC6-207ENST00000448223 DIAPH2O60879 1101 aa10.01□□□□□ -0.81
SMC6-207ENST00000448223 MRPS25P82663 173 aaKnown RBP10.01□□□□□ -0.81
SMC6-207ENST00000448223 GRIN1Q05586 938 aa10.01□□□□□ -0.81
SMC6-207ENST00000448223 PAK1Q13153 545 aa10.01□□□□□ -0.81
SMC6-207ENST00000448223 USPL1Q5W0Q7 1092 aa10.01□□□□□ -0.81
SMC6-207ENST00000448223 SESTD1Q86VW0 696 aa10.01□□□□□ -0.81
SMC6-207ENST00000448223 SLC35F6Q8N357 371 aa10.01□□□□□ -0.81
SMC6-207ENST00000448223 THAP11Q96EK4 314 aa10.01□□□□□ -0.81
SMC6-207ENST00000448223 ELAC2Q9BQ52 826 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms