RNA–Protein interactions for RNA: ENST00000447199.1

SPTLC1P1-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 1, humanhuman

BASIC

Gene SPTLC1P1, Length 261 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P1-201ENST00000447199 AFG1LQ8WV93 481 aa18.4■□□□□ 0.54
SPTLC1P1-201ENST00000447199 CYP2C9P11712 490 aa18.39■□□□□ 0.53
SPTLC1P1-201ENST00000447199 HOXA13P31271 388 aaPredicted RBP18.39■□□□□ 0.53
SPTLC1P1-201ENST00000447199 PTPN11Q06124 597 aaPredicted RBP18.39■□□□□ 0.53
SPTLC1P1-201ENST00000447199 NECTIN1Q15223 517 aa18.39■□□□□ 0.53
SPTLC1P1-201ENST00000447199 VSIG10LQ86VR7 867 aa18.39■□□□□ 0.53
SPTLC1P1-201ENST00000447199 IL31RAQ8NI17 732 aa18.39■□□□□ 0.53
SPTLC1P1-201ENST00000447199 PPP1R13LQ8WUF5 828 aa18.39■□□□□ 0.53
SPTLC1P1-201ENST00000447199 KAT2BQ92831 832 aa18.39■□□□□ 0.53
SPTLC1P1-201ENST00000447199 CXXC1Q9P0U4 656 aaPredicted RBP18.39■□□□□ 0.53
SPTLC1P1-201ENST00000447199 SLC27A2O14975 620 aa18.38■□□□□ 0.53
SPTLC1P1-201ENST00000447199 DDAH1O94760 285 aa18.38■□□□□ 0.53
SPTLC1P1-201ENST00000447199 TRAF1Q13077 416 aa18.38■□□□□ 0.53
SPTLC1P1-201ENST00000447199 BMP2KLQ5H9B9 411 aa18.38■□□□□ 0.53
SPTLC1P1-201ENST00000447199 ZNF654Q8IZM8 581 aa18.38■□□□□ 0.53
SPTLC1P1-201ENST00000447199 SCLYQ96I15 445 aa18.38■□□□□ 0.53
SPTLC1P1-201ENST00000447199 CTAGE1Q96RT6 745 aa18.38■□□□□ 0.53
SPTLC1P1-201ENST00000447199 PBX4Q9BYU1 374 aa18.38■□□□□ 0.53
SPTLC1P1-201ENST00000447199 MYH6P13533 1939 aa18.38■□□□□ 0.53
SPTLC1P1-201ENST00000447199 GRXCR1A8MXD5 290 aa18.37■□□□□ 0.53
SPTLC1P1-201ENST00000447199 SH2B2O14492 632 aaPredicted RBP18.37■□□□□ 0.53
SPTLC1P1-201ENST00000447199 PRC1O43663 620 aa18.37■□□□□ 0.53
SPTLC1P1-201ENST00000447199 FGBP02675 491 aa18.37■□□□□ 0.53
SPTLC1P1-201ENST00000447199 HOXD8P13378 290 aaPredicted RBP18.37■□□□□ 0.53
SPTLC1P1-201ENST00000447199 PGM5Q15124 567 aa18.37■□□□□ 0.53
SPTLC1P1-201ENST00000447199 FAM47CQ5HY64 1035 aa18.37■□□□□ 0.53
SPTLC1P1-201ENST00000447199 CREB3L3Q68CJ9 461 aa18.37■□□□□ 0.53
SPTLC1P1-201ENST00000447199 CENPQQ7L2Z9 268 aaPredicted RBP18.37■□□□□ 0.53
SPTLC1P1-201ENST00000447199 MYLIPQ8WY64 445 aa18.37■□□□□ 0.53
SPTLC1P1-201ENST00000447199 MYL10Q9BUA6 226 aa18.37■□□□□ 0.53
SPTLC1P1-201ENST00000447199 SPZ1Q9BXG8 430 aa18.37■□□□□ 0.53
SPTLC1P1-201ENST00000447199 MRVI1Q9Y6F6 885 aa18.37■□□□□ 0.53
SPTLC1P1-201ENST00000447199 FRMPD4Q14CM0 1322 aa18.37■□□□□ 0.53
SPTLC1P1-201ENST00000447199 GCOM1H8Y6P7 765 aaPredicted RBP18.36■□□□□ 0.53
SPTLC1P1-201ENST00000447199 PITPNM1O00562 1244 aa18.36■□□□□ 0.53
SPTLC1P1-201ENST00000447199 POLR2MP0CAP2 368 aa18.36■□□□□ 0.53
SPTLC1P1-201ENST00000447199 SMARCA1P28370 1054 aa18.36■□□□□ 0.53
SPTLC1P1-201ENST00000447199 MCM5P33992 734 aa18.36■□□□□ 0.53
SPTLC1P1-201ENST00000447199 PBX2P40425 430 aa18.36■□□□□ 0.53
SPTLC1P1-201ENST00000447199 GRIN2CQ14957 1233 aa18.36■□□□□ 0.53
SPTLC1P1-201ENST00000447199 KIAA1217Q5T5P2 1943 aa18.36■□□□□ 0.53
SPTLC1P1-201ENST00000447199 CASC1Q6TDU7 716 aa18.36■□□□□ 0.53
SPTLC1P1-201ENST00000447199 SESTD1Q86VW0 696 aa18.36■□□□□ 0.53
SPTLC1P1-201ENST00000447199 PPTC7Q8NI37 304 aa18.36■□□□□ 0.53
SPTLC1P1-201ENST00000447199 TIFAQ96CG3 184 aa18.36■□□□□ 0.53
SPTLC1P1-201ENST00000447199 TMEM87BQ96K49 555 aa18.36■□□□□ 0.53
SPTLC1P1-201ENST00000447199 BAZ2BQ9UIF8 2168 aaKnown RBP18.36■□□□□ 0.53
SPTLC1P1-201ENST00000447199 MYCLP12524 364 aaPredicted RBP18.35■□□□□ 0.53
SPTLC1P1-201ENST00000447199 CASTP20810 708 aaKnown RBP18.35■□□□□ 0.53
SPTLC1P1-201ENST00000447199 LIFRP42702 1097 aa18.35■□□□□ 0.53
SPTLC1P1-201ENST00000447199 SP2Q02086 613 aa18.35■□□□□ 0.53
SPTLC1P1-201ENST00000447199 LAMC2Q13753 1193 aa18.35■□□□□ 0.53
SPTLC1P1-201ENST00000447199 DGKDQ16760 1214 aa18.35■□□□□ 0.53
SPTLC1P1-201ENST00000447199 MYSM1Q5VVJ2 828 aa18.35■□□□□ 0.53
SPTLC1P1-201ENST00000447199 OTOP2Q7RTS6 562 aa18.35■□□□□ 0.53
SPTLC1P1-201ENST00000447199 RPUSD2Q8IZ73 545 aaKnown RBP18.35■□□□□ 0.53
SPTLC1P1-201ENST00000447199 ZNF576Q9H609 170 aa18.35■□□□□ 0.53
SPTLC1P1-201ENST00000447199 PFKMP08237 780 aa18.34■□□□□ 0.53
SPTLC1P1-201ENST00000447199 CCND2P30279 289 aa18.34■□□□□ 0.53
SPTLC1P1-201ENST00000447199 KIF5BP33176 963 aa18.34■□□□□ 0.53
SPTLC1P1-201ENST00000447199 CELF3Q5SZQ8 465 aaKnown RBP18.34■□□□□ 0.53
SPTLC1P1-201ENST00000447199 GDF6Q6KF10 455 aaPredicted RBP18.34■□□□□ 0.53
SPTLC1P1-201ENST00000447199 KCNV1Q6PIU1 500 aa18.34■□□□□ 0.53
SPTLC1P1-201ENST00000447199 FCHSD1Q86WN1 690 aa18.34■□□□□ 0.53
SPTLC1P1-201ENST00000447199 TMTC2Q8N394 836 aa18.34■□□□□ 0.53
SPTLC1P1-201ENST00000447199 SRBD1Q8N5C6 995 aaKnown RBP18.34■□□□□ 0.53
SPTLC1P1-201ENST00000447199 CTCFLQ8NI51 663 aaPredicted RBP18.34■□□□□ 0.53
SPTLC1P1-201ENST00000447199 MTIF3Q9H2K0 278 aaKnown RBP18.34■□□□□ 0.53
SPTLC1P1-201ENST00000447199 ANO2Q9NQ90 1003 aa18.34■□□□□ 0.53
SPTLC1P1-201ENST00000447199 HAS3O00219 553 aa18.33■□□□□ 0.52
SPTLC1P1-201ENST00000447199 PLEKHA8P1O95397 391 aa18.33■□□□□ 0.52
SPTLC1P1-201ENST00000447199 F2P00734 622 aa18.33■□□□□ 0.52
SPTLC1P1-201ENST00000447199 IQCF3P0C7M6 154 aa18.33■□□□□ 0.52
SPTLC1P1-201ENST00000447199 TGFB3P10600 412 aa18.33■□□□□ 0.52
SPTLC1P1-201ENST00000447199 UBA1P22314 1058 aaKnown RBP18.33■□□□□ 0.52
SPTLC1P1-201ENST00000447199 MRPS9P82933 396 aaKnown RBP18.33■□□□□ 0.52
SPTLC1P1-201ENST00000447199 DHX37Q8IY37 1157 aaKnown RBP18.33■□□□□ 0.52
SPTLC1P1-201ENST00000447199 PIBF1Q8WXW3 757 aa18.33■□□□□ 0.52
SPTLC1P1-201ENST00000447199 GPKOWQ92917 476 aaPredicted RBP eCLIP18.33■□□□□ 0.52
SPTLC1P1-201ENST00000447199 LZTS2Q9BRK4 669 aa18.33■□□□□ 0.52
SPTLC1P1-201ENST00000447199 TRANK1O15050 2925 aa18.33■□□□□ 0.52
SPTLC1P1-201ENST00000447199 FOSL2P15408 326 aa18.32■□□□□ 0.52
SPTLC1P1-201ENST00000447199 RFC2P35250 354 aa18.32■□□□□ 0.52
SPTLC1P1-201ENST00000447199 PTGISQ16647 500 aa18.32■□□□□ 0.52
SPTLC1P1-201ENST00000447199 HSDL1Q3SXM5 330 aa18.32■□□□□ 0.52
SPTLC1P1-201ENST00000447199 SGMS1Q86VZ5 419 aa18.32■□□□□ 0.52
SPTLC1P1-201ENST00000447199 MAFAQ8NHW3 353 aaPredicted RBP18.32■□□□□ 0.52
SPTLC1P1-201ENST00000447199 DHX38Q92620 1227 aaKnown RBP18.32■□□□□ 0.52
SPTLC1P1-201ENST00000447199 RRP36Q96EU6 259 aaKnown RBP18.32■□□□□ 0.52
SPTLC1P1-201ENST00000447199 ZFP91Q96JP5 570 aaPredicted RBP18.32■□□□□ 0.52
SPTLC1P1-201ENST00000447199 INPP4AQ96PE3 977 aaPredicted RBP18.32■□□□□ 0.52
SPTLC1P1-201ENST00000447199 GTF2IRD1Q9UHL9 959 aa18.32■□□□□ 0.52
SPTLC1P1-201ENST00000447199 YBX2Q9Y2T7 364 aaKnown RBP18.32■□□□□ 0.52
SPTLC1P1-201ENST00000447199 MUC3AQ02505 3323 aa18.31■□□□□ 0.52
SPTLC1P1-201ENST00000447199 CCDC69A6NI79 296 aa18.31■□□□□ 0.52
SPTLC1P1-201ENST00000447199 PIK3CDO00329 1044 aa18.31■□□□□ 0.52
SPTLC1P1-201ENST00000447199 MEIS2O14770 477 aa18.31■□□□□ 0.52
SPTLC1P1-201ENST00000447199 PPFIA4O75335 1185 aa18.31■□□□□ 0.52
SPTLC1P1-201ENST00000447199 GGPS1O95749 300 aa18.31■□□□□ 0.52
SPTLC1P1-201ENST00000447199 ZNF286BP0CG31 522 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms