RNA–Protein interactions for RNA: ENST00000447079.4

CDK12-202, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDK12, Length 8,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-202ENST00000447079 IFT172Q9UG01 1749 aa7.68□□□□□ -1.18
CDK12-202ENST00000447079 MED7O43513 233 aa7.68□□□□□ -1.18
CDK12-202ENST00000447079 SPOUT1Q5T280 376 aaKnown RBP7.68□□□□□ -1.18
CDK12-202ENST00000447079 RC3H1Q5TC82 1133 aaKnown RBP7.68□□□□□ -1.18
CDK12-202ENST00000447079 ELMSAN1Q6PJG2 1045 aa7.68□□□□□ -1.18
CDK12-202ENST00000447079 PHLDB2Q86SQ0 1253 aa7.68□□□□□ -1.18
CDK12-202ENST00000447079 CAPN7Q9Y6W3 813 aa7.68□□□□□ -1.18
CDK12-202ENST00000447079 PSAPP07602 524 aa7.68□□□□□ -1.18
CDK12-202ENST00000447079 TCP1P17987 556 aaKnown RBP7.68□□□□□ -1.18
CDK12-202ENST00000447079 ARHGAP24Q8N264 748 aa7.68□□□□□ -1.18
CDK12-202ENST00000447079 CEP120Q8N960 986 aa7.68□□□□□ -1.18
CDK12-202ENST00000447079 EDC3Q96F86 508 aaKnown RBP7.68□□□□□ -1.18
CDK12-202ENST00000447079 HAUS4Q9H6D7 363 aa7.68□□□□□ -1.18
CDK12-202ENST00000447079 SEPT9Q9UHD8 586 aaPredicted RBP7.68□□□□□ -1.18
CDK12-202ENST00000447079 PCDHA7Q9UN72 937 aa7.68□□□□□ -1.18
CDK12-202ENST00000447079 PTK2Q05397 1052 aa7.68□□□□□ -1.18
CDK12-202ENST00000447079 TRIM28Q13263 835 aaKnown RBP7.68□□□□□ -1.18
CDK12-202ENST00000447079 ADAM9Q13443 819 aa7.68□□□□□ -1.18
CDK12-202ENST00000447079 NEDD9Q14511 834 aa7.68□□□□□ -1.18
CDK12-202ENST00000447079 ZNF658Q5TYW1 1059 aaPredicted RBP7.68□□□□□ -1.18
CDK12-202ENST00000447079 TRIM50Q86XT4 487 aa7.68□□□□□ -1.18
CDK12-202ENST00000447079 VPS52Q8N1B4 723 aa7.68□□□□□ -1.18
CDK12-202ENST00000447079 TYW5A2RUC4 315 aaKnown RBP7.68□□□□□ -1.18
CDK12-202ENST00000447079 SLC26A4O43511 780 aa7.68□□□□□ -1.18
CDK12-202ENST00000447079 MYL7Q01449 175 aa7.68□□□□□ -1.18
CDK12-202ENST00000447079 CUL4AQ13619 759 aa7.68□□□□□ -1.18
CDK12-202ENST00000447079 GPKOWQ92917 476 aaPredicted RBP eCLIP7.68□□□□□ -1.18
CDK12-202ENST00000447079 PLA2G12BQ9BX93 195 aa7.68□□□□□ -1.18
CDK12-202ENST00000447079 BLZF1Q9H2G9 400 aa7.68□□□□□ -1.18
CDK12-202ENST00000447079 FEM1BQ9UK73 627 aa7.68□□□□□ -1.18
CDK12-202ENST00000447079 KIAA1024Q9UPX6 916 aa7.68□□□□□ -1.18
CDK12-202ENST00000447079 CPS1P31327 1500 aa7.68□□□□□ -1.18
CDK12-202ENST00000447079 LRRC63Q05C16 580 aa7.67□□□□□ -1.18
CDK12-202ENST00000447079 CCDC105Q8IYK2 499 aa7.67□□□□□ -1.18
CDK12-202ENST00000447079 SEC62Q99442 399 aaKnown RBP7.67□□□□□ -1.18
CDK12-202ENST00000447079 EXOC3L4Q17RC7 722 aa7.67□□□□□ -1.18
CDK12-202ENST00000447079 RCSD1Q6JBY9 416 aa7.67□□□□□ -1.18
CDK12-202ENST00000447079 TYW1BQ6NUM6 668 aa7.67□□□□□ -1.18
CDK12-202ENST00000447079 PNMA8AQ86V59 439 aaPredicted RBP7.67□□□□□ -1.18
CDK12-202ENST00000447079 RNF10Q8N5U6 811 aaKnown RBP7.67□□□□□ -1.18
CDK12-202ENST00000447079 CCHCR1Q8TD31 782 aa7.67□□□□□ -1.18
CDK12-202ENST00000447079 FAM167AQ96KS9 214 aa7.67□□□□□ -1.18
CDK12-202ENST00000447079 MED10Q9BTT4 135 aa7.67□□□□□ -1.18
CDK12-202ENST00000447079 DDX23Q9BUQ8 820 aaKnown RBP7.67□□□□□ -1.18
CDK12-202ENST00000447079 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.67□□□□□ -1.18
CDK12-202ENST00000447079 RRP15Q9Y3B9 282 aaKnown RBP7.67□□□□□ -1.18
CDK12-202ENST00000447079 HYOU1Q9Y4L1 999 aa7.67□□□□□ -1.18
CDK12-202ENST00000447079 CPDO75976 1380 aa7.67□□□□□ -1.18
CDK12-202ENST00000447079 USP17L8P0C7I0 530 aa7.67□□□□□ -1.18
CDK12-202ENST00000447079 FKBP3Q00688 224 aaKnown RBP7.67□□□□□ -1.18
CDK12-202ENST00000447079 ALX1Q15699 326 aa7.67□□□□□ -1.18
CDK12-202ENST00000447079 MUM1L1Q5H9M0 696 aa7.67□□□□□ -1.18
CDK12-202ENST00000447079 NELFCDQ8IXH7 590 aa7.67□□□□□ -1.18
CDK12-202ENST00000447079 GBP5Q96PP8 586 aa7.67□□□□□ -1.18
CDK12-202ENST00000447079 NCAPGQ9BPX3 1015 aa7.67□□□□□ -1.18
CDK12-202ENST00000447079 XPO4Q9C0E2 1151 aaKnown RBP7.67□□□□□ -1.18
CDK12-202ENST00000447079 RWDD2AQ9UIY3 292 aa7.67□□□□□ -1.18
CDK12-202ENST00000447079 LRRIQ4A6NIV6 560 aa7.67□□□□□ -1.18
CDK12-202ENST00000447079 BTBD18B2RXH4 712 aa7.67□□□□□ -1.18
CDK12-202ENST00000447079 CYP21A2P08686 494 aa7.67□□□□□ -1.18
CDK12-202ENST00000447079 SLFN12LQ6IEE8 588 aa7.67□□□□□ -1.18
CDK12-202ENST00000447079 TCP11Q8WWU5 503 aa7.67□□□□□ -1.18
CDK12-202ENST00000447079 PUS3Q9BZE2 481 aaKnown RBP7.67□□□□□ -1.18
CDK12-202ENST00000447079 BCAP29Q9UHQ4 241 aa7.67□□□□□ -1.18
CDK12-202ENST00000447079 JRKLQ9Y4A0 524 aa7.67□□□□□ -1.18
CDK12-202ENST00000447079 SRPRBQ9Y5M8 271 aaKnown RBP7.67□□□□□ -1.18
CDK12-202ENST00000447079 CAPN9O14815 690 aa7.67□□□□□ -1.18
CDK12-202ENST00000447079 GADD45BO75293 160 aaPredicted RBP7.67□□□□□ -1.18
CDK12-202ENST00000447079 GNAT1P11488 350 aa7.67□□□□□ -1.18
CDK12-202ENST00000447079 HPDP32754 393 aaPredicted RBP7.67□□□□□ -1.18
CDK12-202ENST00000447079 NDUFA8P51970 172 aa7.67□□□□□ -1.18
CDK12-202ENST00000447079 C17orf53Q8N3J3 647 aaPredicted RBP7.67□□□□□ -1.18
CDK12-202ENST00000447079 NSUN7Q8NE18 718 aaKnown RBP7.67□□□□□ -1.18
CDK12-202ENST00000447079 HOMER3Q9NSC5 361 aa7.67□□□□□ -1.18
CDK12-202ENST00000447079 FAM207AQ9NSI2 230 aaPredicted RBP7.67□□□□□ -1.18
CDK12-202ENST00000447079 TECPR2O15040 1411 aa7.67□□□□□ -1.18
CDK12-202ENST00000447079 EFCAB8A8MWE9 144 aa7.67□□□□□ -1.18
CDK12-202ENST00000447079 RASA3Q14644 834 aa7.67□□□□□ -1.18
CDK12-202ENST00000447079 SEPT14Q6ZU15 432 aa7.67□□□□□ -1.18
CDK12-202ENST00000447079 MAP7D3Q8IWC1 876 aa7.67□□□□□ -1.18
CDK12-202ENST00000447079 PARVGQ9HBI0 331 aa7.67□□□□□ -1.18
CDK12-202ENST00000447079 CASQ2O14958 399 aaPredicted RBP7.67□□□□□ -1.18
CDK12-202ENST00000447079 GABPAQ06546 454 aa7.67□□□□□ -1.18
CDK12-202ENST00000447079 ZNF579Q8NAF0 562 aaKnown RBP7.67□□□□□ -1.18
CDK12-202ENST00000447079 FAM71BQ8TC56 605 aa7.67□□□□□ -1.18
CDK12-202ENST00000447079 FMN2Q9NZ56 1722 aa7.66□□□□□ -1.18
CDK12-202ENST00000447079 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.66□□□□□ -1.18
CDK12-202ENST00000447079 HNRNPDLO14979 420 aaKnown RBP7.66□□□□□ -1.18
CDK12-202ENST00000447079 CEP104O60308 925 aa7.66□□□□□ -1.18
CDK12-202ENST00000447079 CDK8P49336 464 aa7.66□□□□□ -1.18
CDK12-202ENST00000447079 ZBTB17Q13105 803 aa7.66□□□□□ -1.18
CDK12-202ENST00000447079 RASGRF1Q13972 1273 aa7.66□□□□□ -1.18
CDK12-202ENST00000447079 PRKG1Q13976 671 aa7.66□□□□□ -1.18
CDK12-202ENST00000447079 NT5C1BQ96P26 610 aa7.66□□□□□ -1.18
CDK12-202ENST00000447079 PPANQ9NQ55 473 aaKnown RBP7.66□□□□□ -1.18
CDK12-202ENST00000447079 DONSONQ9NYP3 566 aa7.66□□□□□ -1.18
CDK12-202ENST00000447079 KDM6AO15550 1401 aaPredicted RBP7.66□□□□□ -1.18
CDK12-202ENST00000447079 hCG_1642624A0A1W2PR95 340 aa7.66□□□□□ -1.18
CDK12-202ENST00000447079 RNF8O76064 485 aa7.66□□□□□ -1.18
CDK12-202ENST00000447079 MMP10P09238 476 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms