RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 SLX4Q8IY92 1834 aa9.88□□□□□ -0.83
SMARCE1-206ENST00000447024 ABCC12Q96J65 1359 aa9.88□□□□□ -0.83
SMARCE1-206ENST00000447024 BBOX1O75936 387 aa9.87□□□□□ -0.83
SMARCE1-206ENST00000447024 GLI1P08151 1106 aa9.87□□□□□ -0.83
SMARCE1-206ENST00000447024 RASIP1Q5U651 963 aa9.87□□□□□ -0.83
SMARCE1-206ENST00000447024 LLGL2Q6P1M3 1020 aa9.87□□□□□ -0.83
SMARCE1-206ENST00000447024 KSR2Q6VAB6 950 aa9.87□□□□□ -0.83
SMARCE1-206ENST00000447024 TSPYL6Q8N831 410 aa9.87□□□□□ -0.83
SMARCE1-206ENST00000447024 KCT2Q8NC54 265 aa9.87□□□□□ -0.83
SMARCE1-206ENST00000447024 PPP1R16BQ96T49 567 aa9.87□□□□□ -0.83
SMARCE1-206ENST00000447024 PSMD1Q99460 953 aa9.87□□□□□ -0.83
SMARCE1-206ENST00000447024 DCTN4Q9UJW0 460 aa9.87□□□□□ -0.83
SMARCE1-206ENST00000447024 PCDHA4Q9UN74 947 aa9.87□□□□□ -0.83
SMARCE1-206ENST00000447024 DICER1Q9UPY3 1922 aaKnown RBP9.86□□□□□ -0.83
SMARCE1-206ENST00000447024 KRTAP9-7A8MTY7 169 aa9.86□□□□□ -0.83
SMARCE1-206ENST00000447024 E9PSI1 815 aa9.86□□□□□ -0.83
SMARCE1-206ENST00000447024 VAMP4O75379 141 aa9.86□□□□□ -0.83
SMARCE1-206ENST00000447024 FBXO24O75426 580 aa9.86□□□□□ -0.83
SMARCE1-206ENST00000447024 LRIG2O94898 1065 aa9.86□□□□□ -0.83
SMARCE1-206ENST00000447024 CFPP27918 469 aa9.86□□□□□ -0.83
SMARCE1-206ENST00000447024 GSTT1P30711 240 aa9.86□□□□□ -0.83
SMARCE1-206ENST00000447024 NEXNQ0ZGT2 675 aa9.86□□□□□ -0.83
SMARCE1-206ENST00000447024 PRR23BQ6ZRT6 265 aa9.86□□□□□ -0.83
SMARCE1-206ENST00000447024 CYFIP1Q7L576 1253 aa9.86□□□□□ -0.83
SMARCE1-206ENST00000447024 ZBTB38Q8NAP3 1195 aaPredicted RBP9.86□□□□□ -0.83
SMARCE1-206ENST00000447024 KIRREL1Q96J84 757 aa9.86□□□□□ -0.83
SMARCE1-206ENST00000447024 CEP44Q9C0F1 390 aa9.86□□□□□ -0.83
SMARCE1-206ENST00000447024 PHAXQ9H814 394 aaKnown RBP9.86□□□□□ -0.83
SMARCE1-206ENST00000447024 SEMA3GQ9NS98 782 aa9.86□□□□□ -0.83
SMARCE1-206ENST00000447024 C19orf73Q9NVV2 129 aa9.86□□□□□ -0.83
SMARCE1-206ENST00000447024 GLTPD2A6NH11 291 aa9.85□□□□□ -0.83
SMARCE1-206ENST00000447024 PRR33A8MZF0 331 aa9.85□□□□□ -0.83
SMARCE1-206ENST00000447024 SLITRK5O94991 958 aa9.85□□□□□ -0.83
SMARCE1-206ENST00000447024 PCCAP05165 728 aaPredicted RBP9.85□□□□□ -0.83
SMARCE1-206ENST00000447024 C1QTNF8P60827 252 aa9.85□□□□□ -0.83
SMARCE1-206ENST00000447024 SF3B3Q15393 1217 aaKnown RBP9.85□□□□□ -0.83
SMARCE1-206ENST00000447024 MPZL3Q6UWV2 235 aa9.85□□□□□ -0.83
SMARCE1-206ENST00000447024 DDX46Q7L014 1031 aaKnown RBP9.85□□□□□ -0.83
SMARCE1-206ENST00000447024 C1QL4Q86Z23 238 aa9.85□□□□□ -0.83
SMARCE1-206ENST00000447024 ELMO3Q96BJ8 720 aa9.85□□□□□ -0.83
SMARCE1-206ENST00000447024 HSPA12BQ96MM6 686 aa9.85□□□□□ -0.83
SMARCE1-206ENST00000447024 ATP13A1Q9HD20 1204 aa9.85□□□□□ -0.83
SMARCE1-206ENST00000447024 CWC25Q9NXE8 425 aaPredicted RBP9.85□□□□□ -0.83
SMARCE1-206ENST00000447024 PPM1HQ9ULR3 514 aa9.85□□□□□ -0.83
SMARCE1-206ENST00000447024 PI4KAP2A4QPH2 592 aa9.84□□□□□ -0.83
SMARCE1-206ENST00000447024 TREHO43280 583 aa9.84□□□□□ -0.83
SMARCE1-206ENST00000447024 CT47B1P0C2W7 299 aaPredicted RBP9.84□□□□□ -0.83
SMARCE1-206ENST00000447024 EXOSC9Q06265 439 aaKnown RBP9.84□□□□□ -0.83
SMARCE1-206ENST00000447024 LRRC14Q15048 493 aa9.84□□□□□ -0.83
SMARCE1-206ENST00000447024 SYDE1Q6ZW31 735 aaPredicted RBP9.84□□□□□ -0.83
SMARCE1-206ENST00000447024 PI4KAP1Q8N8J0 262 aa9.84□□□□□ -0.83
SMARCE1-206ENST00000447024 ATP6V0A2Q9Y487 856 aa9.84□□□□□ -0.83
SMARCE1-206ENST00000447024 CCDC88AQ3V6T2 1871 aa9.84□□□□□ -0.83
SMARCE1-206ENST00000447024 TNRC6CQ9HCJ0 1690 aaKnown RBP9.83□□□□□ -0.84
SMARCE1-206ENST00000447024 CDHR2Q9BYE9 1310 aa9.83□□□□□ -0.84
SMARCE1-206ENST00000447024 CACNA1SQ13698 1873 aa9.83□□□□□ -0.84
SMARCE1-206ENST00000447024 IRS4O14654 1257 aaPredicted RBP9.83□□□□□ -0.84
SMARCE1-206ENST00000447024 PLCB3Q01970 1234 aa9.83□□□□□ -0.84
SMARCE1-206ENST00000447024 GRAPQ13588 217 aa9.83□□□□□ -0.84
SMARCE1-206ENST00000447024 SP8Q8IXZ3 490 aa9.83□□□□□ -0.84
SMARCE1-206ENST00000447024 RETREG2Q8NC44 543 aa9.83□□□□□ -0.84
SMARCE1-206ENST00000447024 SUPT20HQ8NEM7 779 aa9.83□□□□□ -0.84
SMARCE1-206ENST00000447024 GRAPLQ8TC17 118 aaPredicted RBP9.83□□□□□ -0.84
SMARCE1-206ENST00000447024 ZNF507Q8TCN5 953 aa9.83□□□□□ -0.84
SMARCE1-206ENST00000447024 FAM89AQ96GI7 184 aa9.83□□□□□ -0.84
SMARCE1-206ENST00000447024 SRCIN1Q9C0H9 1055 aa9.83□□□□□ -0.84
SMARCE1-206ENST00000447024 BIN2Q9UBW5 565 aaPredicted RBP9.83□□□□□ -0.84
SMARCE1-206ENST00000447024 MAP3K2Q9Y2U5 619 aa9.83□□□□□ -0.84
SMARCE1-206ENST00000447024 SNED1Q8TER0 1413 aa9.82□□□□□ -0.84
SMARCE1-206ENST00000447024 FAM155AB1AL88 458 aaPredicted RBP9.82□□□□□ -0.84
SMARCE1-206ENST00000447024 PDE8AO60658 829 aa9.82□□□□□ -0.84
SMARCE1-206ENST00000447024 TOMM70O94826 608 aa9.82□□□□□ -0.84
SMARCE1-206ENST00000447024 ZNF865P0CJ78 1059 aaPredicted RBP9.82□□□□□ -0.84
SMARCE1-206ENST00000447024 VEGFAP15692 232 aaPredicted RBP9.82□□□□□ -0.84
SMARCE1-206ENST00000447024 TMEM67Q5HYA8 995 aa9.82□□□□□ -0.84
SMARCE1-206ENST00000447024 CDKAL1Q5VV42 579 aa9.82□□□□□ -0.84
SMARCE1-206ENST00000447024 DIEXFQ68CQ4 756 aaKnown RBP9.82□□□□□ -0.84
SMARCE1-206ENST00000447024 SCARA3Q6AZY7 606 aa9.82□□□□□ -0.84
SMARCE1-206ENST00000447024 C22orf34Q6ZV56 151 aa9.82□□□□□ -0.84
SMARCE1-206ENST00000447024 LRRC56Q8IYG6 542 aaPredicted RBP9.82□□□□□ -0.84
SMARCE1-206ENST00000447024 MFSD4AQ8N468 514 aa9.82□□□□□ -0.84
SMARCE1-206ENST00000447024 LINS1Q8NG48 757 aa9.82□□□□□ -0.84
SMARCE1-206ENST00000447024 DNAAF4Q8WXU2 420 aa9.82□□□□□ -0.84
SMARCE1-206ENST00000447024 MYD88Q99836 296 aa9.82□□□□□ -0.84
SMARCE1-206ENST00000447024 RTFDC1Q9BY42 306 aaPredicted RBP9.82□□□□□ -0.84
SMARCE1-206ENST00000447024 FBRSQ9HAH7 460 aa9.82□□□□□ -0.84
SMARCE1-206ENST00000447024 TPX2Q9ULW0 747 aaKnown RBP9.82□□□□□ -0.84
SMARCE1-206ENST00000447024 ABCC4O15439 1325 aa9.82□□□□□ -0.84
SMARCE1-206ENST00000447024 LAMB2P55268 1798 aa9.81□□□□□ -0.84
SMARCE1-206ENST00000447024 PRAMEF27A3QJZ7 478 aa9.81□□□□□ -0.84
SMARCE1-206ENST00000447024 GDNFP39905 211 aa9.81□□□□□ -0.84
SMARCE1-206ENST00000447024 IARSP41252 1262 aaKnown RBP9.81□□□□□ -0.84
SMARCE1-206ENST00000447024 PRELPP51888 382 aa9.81□□□□□ -0.84
SMARCE1-206ENST00000447024 SLFN5Q08AF3 891 aa9.81□□□□□ -0.84
SMARCE1-206ENST00000447024 INPP5AQ14642 412 aa9.81□□□□□ -0.84
SMARCE1-206ENST00000447024 CCDC152Q4G0S7 254 aa9.81□□□□□ -0.84
SMARCE1-206ENST00000447024 SFRP5Q5T4F7 317 aa9.81□□□□□ -0.84
SMARCE1-206ENST00000447024 LRFN4Q6PJG9 635 aa9.81□□□□□ -0.84
SMARCE1-206ENST00000447024 LCNL1Q6ZST4 164 aa9.81□□□□□ -0.84
SMARCE1-206ENST00000447024 NPAS4Q8IUM7 802 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms