RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 SH3TC2Q8TF17 1288 aa8.6□□□□□ -1.03
SF3A3P1-201ENST00000446317 PPP1R13LQ8WUF5 828 aa8.6□□□□□ -1.03
SF3A3P1-201ENST00000446317 COPS5Q92905 334 aa8.6□□□□□ -1.03
SF3A3P1-201ENST00000446317 NUDT12Q9BQG2 462 aa8.6□□□□□ -1.03
SF3A3P1-201ENST00000446317 PDCD2LQ9BRP1 358 aa8.6□□□□□ -1.03
SF3A3P1-201ENST00000446317 FOXP1Q9H334 677 aaPredicted RBP8.6□□□□□ -1.03
SF3A3P1-201ENST00000446317 PFASO15067 1338 aa8.6□□□□□ -1.03
SF3A3P1-201ENST00000446317 RBBP6Q7Z6E9 1792 aaKnown RBP8.6□□□□□ -1.03
SF3A3P1-201ENST00000446317 LCTP09848 1927 aa8.59□□□□□ -1.03
SF3A3P1-201ENST00000446317 DNAJC25-GNG10A0A024R161 153 aa8.59□□□□□ -1.03
SF3A3P1-201ENST00000446317 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.59□□□□□ -1.03
SF3A3P1-201ENST00000446317 SLC15A5A6NIM6 579 aa8.59□□□□□ -1.03
SF3A3P1-201ENST00000446317 PIK3CDO00329 1044 aa8.59□□□□□ -1.03
SF3A3P1-201ENST00000446317 MARCH6O60337 910 aa8.59□□□□□ -1.03
SF3A3P1-201ENST00000446317 NR3C2P08235 984 aa8.59□□□□□ -1.03
SF3A3P1-201ENST00000446317 CNGA1P29973 690 aa8.59□□□□□ -1.03
SF3A3P1-201ENST00000446317 CCND2P30279 289 aa8.59□□□□□ -1.03
SF3A3P1-201ENST00000446317 TRAF1Q13077 416 aa8.59□□□□□ -1.03
SF3A3P1-201ENST00000446317 ARMCX2Q7L311 632 aa8.59□□□□□ -1.03
SF3A3P1-201ENST00000446317 TRMT1LQ7Z2T5 733 aaKnown RBP8.59□□□□□ -1.03
SF3A3P1-201ENST00000446317 NEK8Q86SG6 692 aa8.59□□□□□ -1.03
SF3A3P1-201ENST00000446317 PLA2G4DQ86XP0 818 aa8.59□□□□□ -1.03
SF3A3P1-201ENST00000446317 REM2Q8IYK8 340 aaPredicted RBP8.59□□□□□ -1.03
SF3A3P1-201ENST00000446317 NSUN6Q8TEA1 469 aaKnown RBP8.59□□□□□ -1.03
SF3A3P1-201ENST00000446317 MAML3Q96JK9 1138 aa8.59□□□□□ -1.03
SF3A3P1-201ENST00000446317 CLIC6Q96NY7 704 aa8.59□□□□□ -1.03
SF3A3P1-201ENST00000446317 DDX25Q9UHL0 483 aaKnown RBP8.59□□□□□ -1.03
SF3A3P1-201ENST00000446317 GJD2Q9UKL4 321 aa8.59□□□□□ -1.03
SF3A3P1-201ENST00000446317 NOL7Q9UMY1 257 aaKnown RBP8.59□□□□□ -1.03
SF3A3P1-201ENST00000446317 PTCH2Q9Y6C5 1203 aa8.59□□□□□ -1.03
SF3A3P1-201ENST00000446317 RPTORQ8N122 1335 aa8.58□□□□□ -1.04
SF3A3P1-201ENST00000446317 A0A087WWV3 80 aa8.58□□□□□ -1.04
SF3A3P1-201ENST00000446317 PP2D1A8MPX8 630 aa8.58□□□□□ -1.04
SF3A3P1-201ENST00000446317 ARIH2O95376 493 aa8.58□□□□□ -1.04
SF3A3P1-201ENST00000446317 ITGB5P18084 799 aa8.58□□□□□ -1.04
SF3A3P1-201ENST00000446317 SREBF1P36956 1147 aa8.58□□□□□ -1.04
SF3A3P1-201ENST00000446317 RGS2P41220 211 aa8.58□□□□□ -1.04
SF3A3P1-201ENST00000446317 ADCYAP1R1P41586 468 aa8.58□□□□□ -1.04
SF3A3P1-201ENST00000446317 TXKP42681 527 aa8.58□□□□□ -1.04
SF3A3P1-201ENST00000446317 CHMP4BP1P59074 171 aa8.58□□□□□ -1.04
SF3A3P1-201ENST00000446317 AP3B2Q13367 1082 aa8.58□□□□□ -1.04
SF3A3P1-201ENST00000446317 STK38Q15208 465 aa8.58□□□□□ -1.04
SF3A3P1-201ENST00000446317 ZRSR1Q15695 479 aaKnown RBP8.58□□□□□ -1.04
SF3A3P1-201ENST00000446317 LY6KQ17RY6 165 aa8.58□□□□□ -1.04
SF3A3P1-201ENST00000446317 GALNT17Q6IS24 598 aa8.58□□□□□ -1.04
SF3A3P1-201ENST00000446317 OTOP1Q7RTM1 612 aa8.58□□□□□ -1.04
SF3A3P1-201ENST00000446317 RAET1EQ8TD07 263 aa8.58□□□□□ -1.04
SF3A3P1-201ENST00000446317 TRIB2Q92519 343 aa8.58□□□□□ -1.04
SF3A3P1-201ENST00000446317 PLIN2Q99541 437 aa8.58□□□□□ -1.04
SF3A3P1-201ENST00000446317 EHMT1Q9H9B1 1298 aa8.58□□□□□ -1.04
SF3A3P1-201ENST00000446317 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.58□□□□□ -1.04
SF3A3P1-201ENST00000446317 NEMFO60524 1076 aa8.57□□□□□ -1.04
SF3A3P1-201ENST00000446317 ATP9AO75110 1047 aa8.57□□□□□ -1.04
SF3A3P1-201ENST00000446317 GADD45BO75293 160 aaPredicted RBP8.57□□□□□ -1.04
SF3A3P1-201ENST00000446317 RGS20O76081 388 aa8.57□□□□□ -1.04
SF3A3P1-201ENST00000446317 BAG4O95429 457 aaKnown RBP8.57□□□□□ -1.04
SF3A3P1-201ENST00000446317 SNAI1O95863 264 aaPredicted RBP8.57□□□□□ -1.04
SF3A3P1-201ENST00000446317 FOSP01100 380 aaPredicted RBP8.57□□□□□ -1.04
SF3A3P1-201ENST00000446317 CDC25AP30304 524 aa8.57□□□□□ -1.04
SF3A3P1-201ENST00000446317 COPB2P35606 906 aa8.57□□□□□ -1.04
SF3A3P1-201ENST00000446317 SP2Q02086 613 aa8.57□□□□□ -1.04
SF3A3P1-201ENST00000446317 PTGDRQ13258 359 aa8.57□□□□□ -1.04
SF3A3P1-201ENST00000446317 SEMA3FQ13275 785 aa8.57□□□□□ -1.04
SF3A3P1-201ENST00000446317 IL17AQ16552 155 aa8.57□□□□□ -1.04
SF3A3P1-201ENST00000446317 BRAPQ7Z569 592 aa8.57□□□□□ -1.04
SF3A3P1-201ENST00000446317 RGS22Q8NE09 1264 aa8.57□□□□□ -1.04
SF3A3P1-201ENST00000446317 TRPV1Q8NER1 839 aa8.57□□□□□ -1.04
SF3A3P1-201ENST00000446317 USP6NLQ92738 828 aa8.57□□□□□ -1.04
SF3A3P1-201ENST00000446317 ERO1AQ96HE7 468 aa8.57□□□□□ -1.04
SF3A3P1-201ENST00000446317 APBA2Q99767 749 aa8.57□□□□□ -1.04
SF3A3P1-201ENST00000446317 PANK2Q9BZ23 570 aa8.57□□□□□ -1.04
SF3A3P1-201ENST00000446317 ZSCAN16Q9H4T2 348 aaPredicted RBP8.57□□□□□ -1.04
SF3A3P1-201ENST00000446317 SAGE1Q9NXZ1 904 aa8.57□□□□□ -1.04
SF3A3P1-201ENST00000446317 SRRDQ9UH36 339 aa8.57□□□□□ -1.04
SF3A3P1-201ENST00000446317 CIZ1Q9ULV3 898 aaPredicted RBP8.57□□□□□ -1.04
SF3A3P1-201ENST00000446317 VWA3AA6NCI4 1184 aa8.57□□□□□ -1.04
SF3A3P1-201ENST00000446317 MSH4O15457 936 aa8.57□□□□□ -1.04
SF3A3P1-201ENST00000446317 ADCY6O43306 1168 aa8.57□□□□□ -1.04
SF3A3P1-201ENST00000446317 STRNO43815 780 aa8.57□□□□□ -1.04
SF3A3P1-201ENST00000446317 ADCY3O60266 1144 aa8.57□□□□□ -1.04
SF3A3P1-201ENST00000446317 CCND3P30281 292 aaPredicted RBP8.57□□□□□ -1.04
SF3A3P1-201ENST00000446317 TECP42680 631 aa8.57□□□□□ -1.04
SF3A3P1-201ENST00000446317 MTMR1Q13613 665 aa8.57□□□□□ -1.04
SF3A3P1-201ENST00000446317 STXBP2Q15833 593 aa8.57□□□□□ -1.04
SF3A3P1-201ENST00000446317 CALCRLQ16602 461 aa8.57□□□□□ -1.04
SF3A3P1-201ENST00000446317 PCNX4Q63HM2 1172 aa8.57□□□□□ -1.04
SF3A3P1-201ENST00000446317 NCAPH2Q6IBW4 605 aa8.57□□□□□ -1.04
SF3A3P1-201ENST00000446317 VSIG10LQ86VR7 867 aa8.57□□□□□ -1.04
SF3A3P1-201ENST00000446317 SPATA32Q96LK8 384 aa8.57□□□□□ -1.04
SF3A3P1-201ENST00000446317 ZNF396Q96N95 335 aaPredicted RBP8.57□□□□□ -1.04
SF3A3P1-201ENST00000446317 MXRA8Q9BRK3 442 aa8.57□□□□□ -1.04
SF3A3P1-201ENST00000446317 TINF2Q9BSI4 451 aa8.57□□□□□ -1.04
SF3A3P1-201ENST00000446317 ZNF577Q9BSK1 485 aa8.57□□□□□ -1.04
SF3A3P1-201ENST00000446317 GLT8D2Q9H1C3 349 aa8.57□□□□□ -1.04
SF3A3P1-201ENST00000446317 ADD3Q9UEY8 706 aaKnown RBP8.57□□□□□ -1.04
SF3A3P1-201ENST00000446317 PNMA2Q9UL42 364 aa8.57□□□□□ -1.04
SF3A3P1-201ENST00000446317 IGLV3-22A0A075B6J6 115 aa8.56□□□□□ -1.04
SF3A3P1-201ENST00000446317 POTEMA6NI47 508 aa8.56□□□□□ -1.04
SF3A3P1-201ENST00000446317 PRPF40AO75400 957 aaKnown RBP8.56□□□□□ -1.04
SF3A3P1-201ENST00000446317 ME1P48163 572 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms