RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 PPFIA4O75335 1185 aa12.75□□□□□ -0.37
FN1-212ENST00000446046 RPN1P04843 607 aaKnown RBP12.75□□□□□ -0.37
FN1-212ENST00000446046 IL17REQ8NFR9 667 aa12.75□□□□□ -0.37
FN1-212ENST00000446046 GTF3C2Q8WUA4 911 aaPredicted RBP12.75□□□□□ -0.37
FN1-212ENST00000446046 RILPQ96NA2 401 aa12.75□□□□□ -0.37
FN1-212ENST00000446046 MYL10Q9BUA6 226 aa12.75□□□□□ -0.37
FN1-212ENST00000446046 FEM1BQ9UK73 627 aa12.75□□□□□ -0.37
FN1-212ENST00000446046 STK25O00506 426 aa12.75□□□□□ -0.37
FN1-212ENST00000446046 TNFAIP2Q03169 654 aa12.75□□□□□ -0.37
FN1-212ENST00000446046 USP44Q9H0E7 712 aa12.75□□□□□ -0.37
FN1-212ENST00000446046 KYAT1Q16773 422 aa12.75□□□□□ -0.37
FN1-212ENST00000446046 CEP170P1Q96L14 293 aa12.75□□□□□ -0.37
FN1-212ENST00000446046 ZNF189O75820 626 aaPredicted RBP12.75□□□□□ -0.37
FN1-212ENST00000446046 IRAK4Q9NWZ3 460 aa12.75□□□□□ -0.37
FN1-212ENST00000446046 ALKQ9UM73 1620 aa12.75□□□□□ -0.37
FN1-212ENST00000446046 TOPORSQ9NS56 1045 aaPredicted RBP12.75□□□□□ -0.37
FN1-212ENST00000446046 TNS3Q68CZ2 1445 aa12.75□□□□□ -0.37
FN1-212ENST00000446046 MYH7P12883 1935 aa12.75□□□□□ -0.37
FN1-212ENST00000446046 PNMA6FA0A0J9YX94 578 aa12.75□□□□□ -0.37
FN1-212ENST00000446046 TROVE2P10155 538 aaKnown RBP eCLIP12.75□□□□□ -0.37
FN1-212ENST00000446046 APOL6Q9BWW8 343 aa12.75□□□□□ -0.37
FN1-212ENST00000446046 ADAM9Q13443 819 aa12.75□□□□□ -0.37
FN1-212ENST00000446046 KCTD1Q719H9 257 aa12.75□□□□□ -0.37
FN1-212ENST00000446046 SPICE1Q8N0Z3 855 aa12.75□□□□□ -0.37
FN1-212ENST00000446046 PSMD2Q13200 908 aa12.74□□□□□ -0.37
FN1-212ENST00000446046 TYW1BQ6NUM6 668 aa12.74□□□□□ -0.37
FN1-212ENST00000446046 PODNQ7Z5L7 613 aa12.74□□□□□ -0.37
FN1-212ENST00000446046 SPZ1Q9BXG8 430 aa12.74□□□□□ -0.37
FN1-212ENST00000446046 KIAA1468Q9P260 1216 aa12.74□□□□□ -0.37
FN1-212ENST00000446046 ZHX1Q9UKY1 873 aaPredicted RBP12.74□□□□□ -0.37
FN1-212ENST00000446046 MCF2LO15068 1137 aa12.74□□□□□ -0.37
FN1-212ENST00000446046 PFKFB2O60825 505 aa12.74□□□□□ -0.37
FN1-212ENST00000446046 ECE1P42892 770 aa12.74□□□□□ -0.37
FN1-212ENST00000446046 TTLL4Q14679 1199 aa12.74□□□□□ -0.37
FN1-212ENST00000446046 LONRF2Q1L5Z9 754 aa12.74□□□□□ -0.37
FN1-212ENST00000446046 VPS18Q9P253 973 aa12.74□□□□□ -0.37
FN1-212ENST00000446046 ATP2C2O75185 946 aa12.74□□□□□ -0.37
FN1-212ENST00000446046 BSPRYQ5W0U4 402 aa12.74□□□□□ -0.37
FN1-212ENST00000446046 EDEM3Q9BZQ6 932 aa12.74□□□□□ -0.37
FN1-212ENST00000446046 HPCAL4Q9UM19 191 aa12.74□□□□□ -0.37
FN1-212ENST00000446046 MYO1FO00160 1098 aa12.74□□□□□ -0.37
FN1-212ENST00000446046 FAM26FQ5R3K3 315 aa12.74□□□□□ -0.37
FN1-212ENST00000446046 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.74□□□□□ -0.37
FN1-212ENST00000446046 LARP4BQ92615 738 aaKnown RBP12.74□□□□□ -0.37
FN1-212ENST00000446046 JCADQ9P266 1359 aa12.74□□□□□ -0.37
FN1-212ENST00000446046 PER1O15534 1290 aaPredicted RBP12.74□□□□□ -0.37
FN1-212ENST00000446046 CDC42EP1Q00587 391 aa12.74□□□□□ -0.37
FN1-212ENST00000446046 ANKRD20A3Q5VUR7 823 aa12.74□□□□□ -0.37
FN1-212ENST00000446046 SYT10Q6XYQ8 523 aa12.74□□□□□ -0.37
FN1-212ENST00000446046 PI4K2BQ8TCG2 481 aa12.74□□□□□ -0.37
FN1-212ENST00000446046 AFAP1L1Q8TED9 768 aa12.74□□□□□ -0.37
FN1-212ENST00000446046 PARD3BQ8TEW8 1205 aa12.74□□□□□ -0.37
FN1-212ENST00000446046 DHTKD1Q96HY7 919 aaPredicted RBP12.74□□□□□ -0.37
FN1-212ENST00000446046 FTOQ9C0B1 505 aaKnown RBP eCLIP12.74□□□□□ -0.37
FN1-212ENST00000446046 VCX3AQ9NNX9 186 aa12.74□□□□□ -0.37
FN1-212ENST00000446046 FAM207AQ9NSI2 230 aaPredicted RBP12.74□□□□□ -0.37
FN1-212ENST00000446046 FARP1Q9Y4F1 1045 aaPredicted RBP12.74□□□□□ -0.37
FN1-212ENST00000446046 K7ERI5 159 aa12.74□□□□□ -0.37
FN1-212ENST00000446046 USP17L2Q6R6M4 530 aa12.74□□□□□ -0.37
FN1-212ENST00000446046 RNF207Q6ZRF8 634 aa12.74□□□□□ -0.37
FN1-212ENST00000446046 TTC39CQ8N584 583 aa12.74□□□□□ -0.37
FN1-212ENST00000446046 SCYL1Q96KG9 808 aa12.74□□□□□ -0.37
FN1-212ENST00000446046 CA4P22748 312 aa12.73□□□□□ -0.37
FN1-212ENST00000446046 MYSM1Q5VVJ2 828 aa12.73□□□□□ -0.37
FN1-212ENST00000446046 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.73□□□□□ -0.371e-323■■■□□ 15.1
FN1-212ENST00000446046 KIAA1586Q9HCI6 787 aa12.73□□□□□ -0.37
FN1-212ENST00000446046 ATF5Q9Y2D1 282 aaPredicted RBP12.73□□□□□ -0.37
FN1-212ENST00000446046 IGSF1Q8N6C5 1336 aa12.73□□□□□ -0.37
FN1-212ENST00000446046 RPS6KA4O75676 772 aa12.73□□□□□ -0.37
FN1-212ENST00000446046 RECQLP46063 649 aaPredicted RBP12.73□□□□□ -0.37
FN1-212ENST00000446046 SDCCAG3Q96C92 435 aa12.73□□□□□ -0.37
FN1-212ENST00000446046 SH3GLB2Q9NR46 395 aa12.73□□□□□ -0.37
FN1-212ENST00000446046 PREX1Q8TCU6 1659 aa12.73□□□□□ -0.37
FN1-212ENST00000446046 CASQ2O14958 399 aaPredicted RBP12.73□□□□□ -0.37
FN1-212ENST00000446046 ADD2P35612 726 aa12.73□□□□□ -0.37
FN1-212ENST00000446046 NNMTP40261 264 aa12.73□□□□□ -0.37
FN1-212ENST00000446046 IQCB1Q15051 598 aa12.73□□□□□ -0.37
FN1-212ENST00000446046 TTBK2Q6IQ55 1244 aa12.73□□□□□ -0.37
FN1-212ENST00000446046 UBN1Q9NPG3 1134 aa12.73□□□□□ -0.37
FN1-212ENST00000446046 IFNB1P01574 187 aa12.73□□□□□ -0.37
FN1-212ENST00000446046 ARL4AP40617 200 aa12.73□□□□□ -0.37
FN1-212ENST00000446046 PHKA1P46020 1223 aa12.73□□□□□ -0.37
FN1-212ENST00000446046 Q3C1V9 767 aa12.73□□□□□ -0.37
FN1-212ENST00000446046 CCDC127Q96BQ5 260 aa12.73□□□□□ -0.37
FN1-212ENST00000446046 LBHD1Q9BQE6 289 aaPredicted RBP12.73□□□□□ -0.37
FN1-212ENST00000446046 AFF2P51816 1311 aa12.73□□□□□ -0.37
FN1-212ENST00000446046 DENND3A2RUS2 1198 aa12.73□□□□□ -0.37
FN1-212ENST00000446046 SEPT6Q14141 434 aa12.73□□□□□ -0.37
FN1-212ENST00000446046 SRRM1Q8IYB3 904 aaKnown RBP12.73□□□□□ -0.37
FN1-212ENST00000446046 ERO1AQ96HE7 468 aa12.73□□□□□ -0.37
FN1-212ENST00000446046 SAR1BQ9Y6B6 198 aa12.73□□□□□ -0.37
FN1-212ENST00000446046 STXBP2Q15833 593 aa12.73□□□□□ -0.37
FN1-212ENST00000446046 SIX6OS1Q8N1H7 587 aa12.73□□□□□ -0.37
FN1-212ENST00000446046 MCPH1Q8NEM0 835 aa12.73□□□□□ -0.37
FN1-212ENST00000446046 U2AF1L4Q8WU68 220 aaKnown RBP12.73□□□□□ -0.37
FN1-212ENST00000446046 TSC1Q92574 1164 aa12.73□□□□□ -0.37
FN1-212ENST00000446046 SPATA31A3Q5VYP0 1347 aa12.73□□□□□ -0.37
FN1-212ENST00000446046 PASKQ96RG2 1323 aa12.73□□□□□ -0.37
FN1-212ENST00000446046 BFSP1Q12934 665 aa12.72□□□□□ -0.37
FN1-212ENST00000446046 CTAGE3PQ8IX95 158 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms