RNA–Protein interactions for RNA: ENST00000445561.5

TRO-215, Transcript of trophinin, humanhuman

TSL 1 (best)

Gene TRO, Length 2,597 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-215ENST00000445561 PLAGL2Q9UPG8 496 aa14.01□□□□□ -0.17
TRO-215ENST00000445561 FAN1Q9Y2M0 1017 aa14.01□□□□□ -0.17
TRO-215ENST00000445561 CAPN6Q9Y6Q1 641 aa14.01□□□□□ -0.17
TRO-215ENST00000445561 PVALEFA0A1B0GWK0 134 aa14□□□□□ -0.17
TRO-215ENST00000445561 LRRC53A6NM62 1247 aa14□□□□□ -0.17
TRO-215ENST00000445561 MPHOSPH10O00566 681 aaKnown RBP14□□□□□ -0.17
TRO-215ENST00000445561 SSBP05455 408 aaKnown RBP eCLIP14□□□□□ -0.17
TRO-215ENST00000445561 SNHG28P0DPA3 235 aa14□□□□□ -0.17
TRO-215ENST00000445561 SCNN1DP51172 638 aa14□□□□□ -0.17
TRO-215ENST00000445561 ORC2Q13416 577 aaPredicted RBP14□□□□□ -0.17
TRO-215ENST00000445561 RRAGAQ7L523 313 aa14□□□□□ -0.17
TRO-215ENST00000445561 GSPT2Q8IYD1 628 aaKnown RBP14□□□□□ -0.17
TRO-215ENST00000445561 GUF1Q8N442 669 aaKnown RBP14□□□□□ -0.17
TRO-215ENST00000445561 CERS5Q8N5B7 392 aa14□□□□□ -0.17
TRO-215ENST00000445561 HAS1Q92839 578 aa14□□□□□ -0.17
TRO-215ENST00000445561 PURBQ96QR8 312 aaKnown RBP14□□□□□ -0.17
TRO-215ENST00000445561 RAB34Q9BZG1 259 aa14□□□□□ -0.17
TRO-215ENST00000445561 GBP3Q9H0R5 595 aa14□□□□□ -0.17
TRO-215ENST00000445561 TBC1D7Q9P0N9 293 aa14□□□□□ -0.17
TRO-215ENST00000445561 DDX25Q9UHL0 483 aaKnown RBP14□□□□□ -0.17
TRO-215ENST00000445561 PNMA6FA0A0J9YX94 578 aa14□□□□□ -0.17
TRO-215ENST00000445561 hCG_1984214I3L0E3 225 aa14□□□□□ -0.17
TRO-215ENST00000445561 RAD21O60216 631 aa14□□□□□ -0.17
TRO-215ENST00000445561 BBOX1O75936 387 aa14□□□□□ -0.17
TRO-215ENST00000445561 TTLL1O95922 423 aa14□□□□□ -0.17
TRO-215ENST00000445561 EIF4A3P38919 411 aaKnown RBP14□□□□□ -0.17
TRO-215ENST00000445561 KIF11P52732 1056 aa14□□□□□ -0.17
TRO-215ENST00000445561 C2orf54Q08AI8 447 aa14□□□□□ -0.17
TRO-215ENST00000445561 ZNF543Q08ER8 600 aa14□□□□□ -0.17
TRO-215ENST00000445561 MAN2A1Q16706 1144 aa14□□□□□ -0.17
TRO-215ENST00000445561 LRRC55Q6ZSA7 311 aa14□□□□□ -0.17
TRO-215ENST00000445561 TXLNBQ8N3L3 684 aa14□□□□□ -0.17
TRO-215ENST00000445561 ZNF713Q8N859 430 aaPredicted RBP14□□□□□ -0.17
TRO-215ENST00000445561 PSMB7Q99436 277 aa14□□□□□ -0.17
TRO-215ENST00000445561 FGFBP2Q9BYJ0 223 aa14□□□□□ -0.17
TRO-215ENST00000445561 TANGO6Q9C0B7 1094 aa14□□□□□ -0.17
TRO-215ENST00000445561 DEF6Q9H4E7 631 aa14□□□□□ -0.17
TRO-215ENST00000445561 PODXL2Q9NZ53 605 aa14□□□□□ -0.17
TRO-215ENST00000445561 PCDHA13Q9Y5I0 950 aa14□□□□□ -0.17
TRO-215ENST00000445561 IGKV6D-41A0A0C4DH26 115 aa13.99□□□□□ -0.17
TRO-215ENST00000445561 USP17L10C9JJH3 530 aa13.99□□□□□ -0.17
TRO-215ENST00000445561 MARCH6O60337 910 aa13.99□□□□□ -0.17
TRO-215ENST00000445561 MOCS3O95396 460 aa13.99□□□□□ -0.17
TRO-215ENST00000445561 TNNT3P45378 269 aaPredicted RBP13.99□□□□□ -0.17
TRO-215ENST00000445561 CDK17Q00537 523 aa13.99□□□□□ -0.17
TRO-215ENST00000445561 CACNB1Q02641 598 aaPredicted RBP13.99□□□□□ -0.17
TRO-215ENST00000445561 PDIA5Q14554 519 aa13.99□□□□□ -0.17
TRO-215ENST00000445561 RIC8AQ9NPQ8 531 aa13.99□□□□□ -0.17
TRO-215ENST00000445561 CALCOCO1Q9P1Z2 691 aa13.99□□□□□ -0.17
TRO-215ENST00000445561 SERPINB13Q9UIV8 391 aa13.99□□□□□ -0.17
TRO-215ENST00000445561 PLIN4Q96Q06 1357 aa13.99□□□□□ -0.17
TRO-215ENST00000445561 DDR1Q08345 913 aa13.99□□□□□ -0.17
TRO-215ENST00000445561 TMEM119Q4V9L6 283 aa13.99□□□□□ -0.17
TRO-215ENST00000445561 ANKRD13CQ8N6S4 541 aa13.99□□□□□ -0.17
TRO-215ENST00000445561 KANSL2Q9H9L4 492 aa13.99□□□□□ -0.17
TRO-215ENST00000445561 MYBL2P10244 700 aa13.98□□□□□ -0.17
TRO-215ENST00000445561 CLK2P49760 499 aaKnown RBP13.98□□□□□ -0.17
TRO-215ENST00000445561 MRPS25P82663 173 aaKnown RBP13.98□□□□□ -0.17
TRO-215ENST00000445561 LRRC63Q05C16 580 aa13.98□□□□□ -0.17
TRO-215ENST00000445561 EHHADHQ08426 723 aa13.98□□□□□ -0.17
TRO-215ENST00000445561 RAD51AP2Q09MP3 1159 aa13.98□□□□□ -0.17
TRO-215ENST00000445561 COASYQ13057 564 aa13.98□□□□□ -0.17
TRO-215ENST00000445561 SHROOM1Q2M3G4 852 aaPredicted RBP13.98□□□□□ -0.17
TRO-215ENST00000445561 EXOC4Q96A65 974 aa13.98□□□□□ -0.17
TRO-215ENST00000445561 TRERF1Q96PN7 1200 aa13.98□□□□□ -0.17
TRO-215ENST00000445561 USP40Q9NVE5 1235 aa13.98□□□□□ -0.17
TRO-215ENST00000445561 NPHP3-ACAD11A0A0J9YXS1 232 aa13.98□□□□□ -0.17
TRO-215ENST00000445561 ANO9A1A5B4 782 aa13.98□□□□□ -0.17
TRO-215ENST00000445561 AKR1B10O60218 316 aa13.98□□□□□ -0.17
TRO-215ENST00000445561 TUBBP07437 444 aa13.98□□□□□ -0.17
TRO-215ENST00000445561 HNRNPH3P31942 346 aaKnown RBP13.98□□□□□ -0.17
TRO-215ENST00000445561 CXCR5P32302 372 aa13.98□□□□□ -0.17
TRO-215ENST00000445561 SHMT1P34896 483 aa13.98□□□□□ -0.17
TRO-215ENST00000445561 CKAP4Q07065 602 aaKnown RBP13.98□□□□□ -0.17
TRO-215ENST00000445561 DOK7Q18PE1 504 aa13.98□□□□□ -0.17
TRO-215ENST00000445561 PPP4R3AQ6IN85 833 aa13.98□□□□□ -0.17
TRO-215ENST00000445561 COG1Q8WTW3 980 aa13.98□□□□□ -0.17
TRO-215ENST00000445561 BAP1Q92560 729 aa13.98□□□□□ -0.17
TRO-215ENST00000445561 CUL5Q93034 780 aa13.98□□□□□ -0.17
TRO-215ENST00000445561 DNAJC19Q96DA6 116 aa13.98□□□□□ -0.17
TRO-215ENST00000445561 TSGA10Q9BZW7 698 aa13.98□□□□□ -0.17
TRO-215ENST00000445561 SH2D4AQ9H788 454 aa13.98□□□□□ -0.17
TRO-215ENST00000445561 SMARCAL1Q9NZC9 954 aa13.98□□□□□ -0.17
TRO-215ENST00000445561 USP17L15C9J2P7 530 aa13.97□□□□□ -0.17
TRO-215ENST00000445561 USP17L13C9JLJ4 530 aa13.97□□□□□ -0.17
TRO-215ENST00000445561 USP17L11C9JVI0 530 aa13.97□□□□□ -0.17
TRO-215ENST00000445561 USP17L18D6R9N7 530 aa13.97□□□□□ -0.17
TRO-215ENST00000445561 USP17L22D6RA61 530 aa13.97□□□□□ -0.17
TRO-215ENST00000445561 USP17L17D6RBQ6 530 aa13.97□□□□□ -0.17
TRO-215ENST00000445561 USP17L19D6RCP7 530 aa13.97□□□□□ -0.17
TRO-215ENST00000445561 USP17L20D6RJB6 530 aa13.97□□□□□ -0.17
TRO-215ENST00000445561 E9PMD0 336 aa13.97□□□□□ -0.17
TRO-215ENST00000445561 LY75O60449 1722 aa13.97□□□□□ -0.17
TRO-215ENST00000445561 USO1O60763 962 aaKnown RBP13.97□□□□□ -0.17
TRO-215ENST00000445561 APBA1Q02410 837 aa13.97□□□□□ -0.17
TRO-215ENST00000445561 GFPT1Q06210 699 aaPredicted RBP13.97□□□□□ -0.17
TRO-215ENST00000445561 USP17L24Q0WX57 530 aa13.97□□□□□ -0.17
TRO-215ENST00000445561 USP17L6PQ6QN14 398 aa13.97□□□□□ -0.17
TRO-215ENST00000445561 NELFCDQ8IXH7 590 aa13.97□□□□□ -0.17
TRO-215ENST00000445561 PSTPIP2Q9H939 334 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms