RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 LRRC63Q05C16 580 aa19.85■□□□□ 0.77
CLDN9-201ENST00000445369 PSMD2Q13200 908 aa19.85■□□□□ 0.77
CLDN9-201ENST00000445369 SHROOM1Q2M3G4 852 aaPredicted RBP19.85■□□□□ 0.77
CLDN9-201ENST00000445369 DACT2Q5SW24 774 aa19.85■□□□□ 0.77
CLDN9-201ENST00000445369 FKBP15Q5T1M5 1219 aa19.85■□□□□ 0.77
CLDN9-201ENST00000445369 STRIP1Q5VSL9 837 aa19.85■□□□□ 0.77
CLDN9-201ENST00000445369 FOXR2Q6PJQ5 311 aa19.85■□□□□ 0.77
CLDN9-201ENST00000445369 IQCDQ96DY2 449 aa19.85■□□□□ 0.77
CLDN9-201ENST00000445369 TRIM10Q9UDY6 481 aa19.85■□□□□ 0.77
CLDN9-201ENST00000445369 PLSCR1O15162 318 aa19.85■□□□□ 0.77
CLDN9-201ENST00000445369 TCP10Q12799 353 aa19.85■□□□□ 0.77
CLDN9-201ENST00000445369 CERKLQ49MI3 558 aaPredicted RBP19.85■□□□□ 0.77
CLDN9-201ENST00000445369 SH3BP5LQ7L8J4 393 aa19.85■□□□□ 0.77
CLDN9-201ENST00000445369 GJA10Q969M2 543 aa19.85■□□□□ 0.77
CLDN9-201ENST00000445369 ZSWIM4Q9H7M6 989 aa19.85■□□□□ 0.77
CLDN9-201ENST00000445369 KANSL2Q9H9L4 492 aa19.85■□□□□ 0.77
CLDN9-201ENST00000445369 PI4KBQ9UBF8 816 aa19.85■□□□□ 0.77
CLDN9-201ENST00000445369 PUF60Q9UHX1 559 aaKnown RBP19.85■□□□□ 0.77
CLDN9-201ENST00000445369 KDM3AQ9Y4C1 1321 aa19.84■□□□□ 0.77
CLDN9-201ENST00000445369 IDEP14735 1019 aa19.84■□□□□ 0.77
CLDN9-201ENST00000445369 SLC1A4P43007 532 aa19.84■□□□□ 0.77
CLDN9-201ENST00000445369 KRT83P78385 493 aa19.84■□□□□ 0.77
CLDN9-201ENST00000445369 CDK17Q00537 523 aa19.84■□□□□ 0.77
CLDN9-201ENST00000445369 WHAMMP3Q1A5X7 153 aa19.84■□□□□ 0.77
CLDN9-201ENST00000445369 VWA3BQ502W6 1294 aa19.84■□□□□ 0.77
CLDN9-201ENST00000445369 SLFN13Q68D06 897 aa19.84■□□□□ 0.77
CLDN9-201ENST00000445369 CCDC170Q8IYT3 715 aa19.84■□□□□ 0.77
CLDN9-201ENST00000445369 ZNF622Q969S3 477 aaKnown RBP eCLIP19.84■□□□□ 0.77
CLDN9-201ENST00000445369 DNAJC19Q96DA6 116 aa19.84■□□□□ 0.77
CLDN9-201ENST00000445369 ZNHIT6Q9NWK9 470 aaKnown RBP19.84■□□□□ 0.77
CLDN9-201ENST00000445369 GUCA1BQ9UMX6 200 aa19.84■□□□□ 0.77
CLDN9-201ENST00000445369 PCDHA12Q9UN75 941 aa19.84■□□□□ 0.77
CLDN9-201ENST00000445369 USP17L15C9J2P7 530 aa19.83■□□□□ 0.77
CLDN9-201ENST00000445369 USP17L13C9JLJ4 530 aa19.83■□□□□ 0.77
CLDN9-201ENST00000445369 USP17L11C9JVI0 530 aa19.83■□□□□ 0.77
CLDN9-201ENST00000445369 USP17L18D6R9N7 530 aa19.83■□□□□ 0.77
CLDN9-201ENST00000445369 USP17L22D6RA61 530 aa19.83■□□□□ 0.77
CLDN9-201ENST00000445369 USP17L17D6RBQ6 530 aa19.83■□□□□ 0.77
CLDN9-201ENST00000445369 USP17L19D6RCP7 530 aa19.83■□□□□ 0.77
CLDN9-201ENST00000445369 USP17L20D6RJB6 530 aa19.83■□□□□ 0.77
CLDN9-201ENST00000445369 PSMD14O00487 310 aa19.83■□□□□ 0.77
CLDN9-201ENST00000445369 NPM3O75607 178 aaKnown RBP19.83■□□□□ 0.77
CLDN9-201ENST00000445369 FGFR1OPO95684 399 aaKnown RBP19.83■□□□□ 0.77
CLDN9-201ENST00000445369 CYLC1P35663 651 aaPredicted RBP19.83■□□□□ 0.77
CLDN9-201ENST00000445369 PLA2G4AP47712 749 aa19.83■□□□□ 0.77
CLDN9-201ENST00000445369 USP17L24Q0WX57 530 aa19.83■□□□□ 0.77
CLDN9-201ENST00000445369 SEPT2Q15019 361 aa19.83■□□□□ 0.77
CLDN9-201ENST00000445369 CDC37Q16543 378 aaPredicted RBP19.83■□□□□ 0.77
CLDN9-201ENST00000445369 MAN2A1Q16706 1144 aa19.83■□□□□ 0.77
CLDN9-201ENST00000445369 TATDN1Q6P1N9 297 aa19.83■□□□□ 0.77
CLDN9-201ENST00000445369 USP17L6PQ6QN14 398 aa19.83■□□□□ 0.77
CLDN9-201ENST00000445369 LRRC55Q6ZSA7 311 aa19.83■□□□□ 0.77
CLDN9-201ENST00000445369 FLAD1Q8NFF5 587 aa19.83■□□□□ 0.77
CLDN9-201ENST00000445369 PCMTD1Q96MG8 357 aaPredicted RBP19.83■□□□□ 0.77
CLDN9-201ENST00000445369 SIK3Q9Y2K2 1263 aa19.83■□□□□ 0.77
CLDN9-201ENST00000445369 PCDHA1Q9Y5I3 950 aa19.83■□□□□ 0.77
CLDN9-201ENST00000445369 EIF3CLB5ME19 914 aaKnown RBP19.83■□□□□ 0.76
CLDN9-201ENST00000445369 ECE2O60344 883 aa19.83■□□□□ 0.76
CLDN9-201ENST00000445369 SIAH1Q8IUQ4 282 aa19.83■□□□□ 0.76
CLDN9-201ENST00000445369 MBOAT7Q96N66 472 aa19.83■□□□□ 0.76
CLDN9-201ENST00000445369 EIF3CQ99613 913 aaKnown RBP19.83■□□□□ 0.76
CLDN9-201ENST00000445369 ANO3Q9BYT9 981 aa19.83■□□□□ 0.76
CLDN9-201ENST00000445369 NT5C3AQ9H0P0 336 aa19.83■□□□□ 0.76
CLDN9-201ENST00000445369 NDST4Q9H3R1 872 aa19.83■□□□□ 0.76
CLDN9-201ENST00000445369 NHEJ1Q9H9Q4 299 aaPredicted RBP19.83■□□□□ 0.76
CLDN9-201ENST00000445369 KCNMB3Q9NPA1 279 aa19.83■□□□□ 0.76
CLDN9-201ENST00000445369 PRDM4Q9UKN5 801 aa19.83■□□□□ 0.76
CLDN9-201ENST00000445369 TBC1D8O95759 1140 aa19.82■□□□□ 0.76
CLDN9-201ENST00000445369 TFRCP02786 760 aaKnown RBP19.82■□□□□ 0.76
CLDN9-201ENST00000445369 USP11P51784 963 aa19.82■□□□□ 0.76
CLDN9-201ENST00000445369 TUBB4BP68371 445 aa19.82■□□□□ 0.76
CLDN9-201ENST00000445369 COASYQ13057 564 aa19.82■□□□□ 0.76
CLDN9-201ENST00000445369 MSANTD4Q8NCY6 345 aa19.82■□□□□ 0.76
CLDN9-201ENST00000445369 GLIS3Q8NEA6 775 aa19.82■□□□□ 0.76
CLDN9-201ENST00000445369 ANKZF1Q9H8Y5 726 aa19.82■□□□□ 0.76
CLDN9-201ENST00000445369 CYP3A7-CYP3A51PA0A087WV96 503 aa19.82■□□□□ 0.76
CLDN9-201ENST00000445369 CCDC151A5D8V7 595 aa19.82■□□□□ 0.76
CLDN9-201ENST00000445369 SLC26A4O43511 780 aa19.82■□□□□ 0.76
CLDN9-201ENST00000445369 MARCH6O60337 910 aa19.82■□□□□ 0.76
CLDN9-201ENST00000445369 CYP3A7P24462 503 aa19.82■□□□□ 0.76
CLDN9-201ENST00000445369 HNRNPH3P31942 346 aaKnown RBP19.82■□□□□ 0.76
CLDN9-201ENST00000445369 CCDC122Q5T0U0 273 aa19.82■□□□□ 0.76
CLDN9-201ENST00000445369 ST7Q9NRC1 585 aa19.82■□□□□ 0.76
CLDN9-201ENST00000445369 MYO6Q9UM54 1294 aa19.82■□□□□ 0.76
CLDN9-201ENST00000445369 POTEB2H3BUK9 544 aa19.81■□□□□ 0.76
CLDN9-201ENST00000445369 SASH3O75995 380 aa19.81■□□□□ 0.76
CLDN9-201ENST00000445369 ICA1Q05084 483 aa19.81■□□□□ 0.76
CLDN9-201ENST00000445369 AP3B2Q13367 1082 aa19.81■□□□□ 0.76
CLDN9-201ENST00000445369 BRD3Q15059 726 aa19.81■□□□□ 0.76
CLDN9-201ENST00000445369 ZCWPW2Q504Y3 356 aa19.81■□□□□ 0.76
CLDN9-201ENST00000445369 MOXD1Q6UVY6 613 aa19.81■□□□□ 0.76
CLDN9-201ENST00000445369 TMEM179Q6ZVK1 233 aa19.81■□□□□ 0.76
CLDN9-201ENST00000445369 C2CD5Q86YS7 1000 aa19.81■□□□□ 0.76
CLDN9-201ENST00000445369 CRYGNQ8WXF5 182 aa19.81■□□□□ 0.76
CLDN9-201ENST00000445369 ARFGAP3Q9NP61 516 aa19.81■□□□□ 0.76
CLDN9-201ENST00000445369 TFR2Q9UP52 801 aa19.81■□□□□ 0.76
CLDN9-201ENST00000445369 MEIS2O14770 477 aa19.8■□□□□ 0.76
CLDN9-201ENST00000445369 RAD21O60216 631 aa19.8■□□□□ 0.76
CLDN9-201ENST00000445369 RBM5P52756 815 aaKnown RBP eCLIP19.8■□□□□ 0.76
CLDN9-201ENST00000445369 LRRC41Q15345 812 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms