RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 ANO3Q9BYT9 981 aa16.11■□□□□ 0.17
SSBP3-208ENST00000444533 WDR11Q9BZH6 1224 aa16.11■□□□□ 0.17
SSBP3-208ENST00000444533 SMC3Q9UQE7 1217 aa16.11■□□□□ 0.17
SSBP3-208ENST00000444533 MRVI1Q9Y6F6 885 aa16.11■□□□□ 0.17
SSBP3-208ENST00000444533 KBTBD13C9JR72 458 aa16.1■□□□□ 0.17
SSBP3-208ENST00000444533 ZEB2O60315 1214 aa16.1■□□□□ 0.17
SSBP3-208ENST00000444533 DUSP11O75319 330 aaKnown RBP16.1■□□□□ 0.17
SSBP3-208ENST00000444533 TXNP10599 105 aaKnown RBP16.1■□□□□ 0.17
SSBP3-208ENST00000444533 ANKLE1Q8NAG6 615 aa16.1■□□□□ 0.17
SSBP3-208ENST00000444533 FRMPD4Q14CM0 1322 aa16.1■□□□□ 0.17
SSBP3-208ENST00000444533 HTTP42858 3142 aa16.09■□□□□ 0.17
SSBP3-208ENST00000444533 CCDC194A0A1B0GVG4 234 aa16.09■□□□□ 0.17
SSBP3-208ENST00000444533 K7ELQ4 463 aaPredicted RBP16.09■□□□□ 0.17
SSBP3-208ENST00000444533 CD2BP2O95400 341 aaKnown RBP16.09■□□□□ 0.17
SSBP3-208ENST00000444533 TGFB3P10600 412 aa16.09■□□□□ 0.17
SSBP3-208ENST00000444533 KRT2P35908 639 aa16.09■□□□□ 0.17
SSBP3-208ENST00000444533 ADCYAP1R1P41586 468 aa16.09■□□□□ 0.17
SSBP3-208ENST00000444533 CLK2P49760 499 aaKnown RBP16.09■□□□□ 0.17
SSBP3-208ENST00000444533 ANO1Q5XXA6 986 aa16.09■□□□□ 0.17
SSBP3-208ENST00000444533 KRT25Q7Z3Z0 450 aa16.09■□□□□ 0.17
SSBP3-208ENST00000444533 DAGLBQ8NCG7 672 aa16.09■□□□□ 0.17
SSBP3-208ENST00000444533 AIFM3Q96NN9 605 aa16.09■□□□□ 0.17
SSBP3-208ENST00000444533 PHF20Q9BVI0 1012 aa16.09■□□□□ 0.17
SSBP3-208ENST00000444533 Q9Y3F1 56 aa16.09■□□□□ 0.17
SSBP3-208ENST00000444533 POTEFA5A3E0 1075 aa16.08■□□□□ 0.16
SSBP3-208ENST00000444533 FIBPO43427 364 aa16.08■□□□□ 0.16
SSBP3-208ENST00000444533 C6orf222P0C671 652 aaPredicted RBP16.08■□□□□ 0.16
SSBP3-208ENST00000444533 FDPSP14324 419 aaKnown RBP16.08■□□□□ 0.16
SSBP3-208ENST00000444533 SREBF1P36956 1147 aa16.08■□□□□ 0.16
SSBP3-208ENST00000444533 FOSBP53539 338 aa16.08■□□□□ 0.16
SSBP3-208ENST00000444533 DUSP28Q4G0W2 176 aa16.08■□□□□ 0.16
SSBP3-208ENST00000444533 TAPT1Q6NXT6 567 aa16.08■□□□□ 0.16
SSBP3-208ENST00000444533 TLK2Q86UE8 772 aa16.08■□□□□ 0.16
SSBP3-208ENST00000444533 SNX21Q969T3 373 aa16.08■□□□□ 0.16
SSBP3-208ENST00000444533 KATNBL1Q9H079 304 aa16.08■□□□□ 0.16
SSBP3-208ENST00000444533 CRISPLD2Q9H0B8 497 aa16.08■□□□□ 0.16
SSBP3-208ENST00000444533 PDGFCQ9NRA1 345 aa16.08■□□□□ 0.16
SSBP3-208ENST00000444533 TMEM260Q9NX78 707 aa16.08■□□□□ 0.16
SSBP3-208ENST00000444533 RTEL1Q9NZ71 1219 aa16.08■□□□□ 0.16
SSBP3-208ENST00000444533 OGDHLQ9ULD0 1010 aa16.08■□□□□ 0.16
SSBP3-208ENST00000444533 KCNJ14Q9UNX9 436 aa16.08■□□□□ 0.16
SSBP3-208ENST00000444533 RBM47A0AV96 593 aaKnown RBP16.07■□□□□ 0.16
SSBP3-208ENST00000444533 H3BQV1 296 aa16.07■□□□□ 0.16
SSBP3-208ENST00000444533 DNM1LO00429 736 aa16.07■□□□□ 0.16
SSBP3-208ENST00000444533 MAFGO15525 162 aa16.07■□□□□ 0.16
SSBP3-208ENST00000444533 FARP2O94887 1054 aaPredicted RBP16.07■□□□□ 0.16
SSBP3-208ENST00000444533 EN2P19622 333 aaPredicted RBP16.07■□□□□ 0.16
SSBP3-208ENST00000444533 CPT1AP50416 773 aa16.07■□□□□ 0.16
SSBP3-208ENST00000444533 ARHGAP4P98171 946 aa16.07■□□□□ 0.16
SSBP3-208ENST00000444533 ST3GAL1Q11201 340 aa16.07■□□□□ 0.16
SSBP3-208ENST00000444533 MTMR1Q13613 665 aa16.07■□□□□ 0.16
SSBP3-208ENST00000444533 NONOQ15233 471 aaKnown RBP eCLIP16.07■□□□□ 0.16
SSBP3-208ENST00000444533 IFFO2Q5TF58 517 aa16.07■□□□□ 0.16
SSBP3-208ENST00000444533 LHX8Q68G74 356 aa16.07■□□□□ 0.16
SSBP3-208ENST00000444533 PCSK9Q8NBP7 692 aaKnown RBP16.07■□□□□ 0.16
SSBP3-208ENST00000444533 GIMAP8Q8ND71 665 aaPredicted RBP16.07■□□□□ 0.16
SSBP3-208ENST00000444533 OR6J1Q8NGC5 347 aa16.07■□□□□ 0.16
SSBP3-208ENST00000444533 PGBD1Q96JS3 809 aa16.07■□□□□ 0.16
SSBP3-208ENST00000444533 NAP1L4Q99733 375 aaKnown RBP16.07■□□□□ 0.16
SSBP3-208ENST00000444533 TCEAL9Q9UHQ7 104 aa16.07■□□□□ 0.16
SSBP3-208ENST00000444533 DDX49Q9Y6V7 483 aaKnown RBP16.07■□□□□ 0.16
SSBP3-208ENST00000444533 MCM3APO60318 1980 aa16.07■□□□□ 0.16
SSBP3-208ENST00000444533 CENPFP49454 3210 aa16.06■□□□□ 0.16
SSBP3-208ENST00000444533 LCTP09848 1927 aa16.06■□□□□ 0.16
SSBP3-208ENST00000444533 DYNC1LI2O43237 492 aaPredicted RBP16.06■□□□□ 0.16
SSBP3-208ENST00000444533 PGK1P00558 417 aa16.06■□□□□ 0.16
SSBP3-208ENST00000444533 GH1P01241 217 aa16.06■□□□□ 0.16
SSBP3-208ENST00000444533 MMP1P03956 469 aa16.06■□□□□ 0.16
SSBP3-208ENST00000444533 SMPD1P17405 629 aa16.06■□□□□ 0.16
SSBP3-208ENST00000444533 PDCP20941 246 aa16.06■□□□□ 0.16
SSBP3-208ENST00000444533 GJB2P29033 226 aa16.06■□□□□ 0.16
SSBP3-208ENST00000444533 NEDD9Q14511 834 aa16.06■□□□□ 0.16
SSBP3-208ENST00000444533 KRT40Q6A162 431 aa16.06■□□□□ 0.16
SSBP3-208ENST00000444533 NECAB2Q7Z6G3 386 aa16.06■□□□□ 0.16
SSBP3-208ENST00000444533 DHX37Q8IY37 1157 aaKnown RBP16.06■□□□□ 0.16
SSBP3-208ENST00000444533 IL31RAQ8NI17 732 aa16.06■□□□□ 0.16
SSBP3-208ENST00000444533 RASGRP4Q8TDF6 673 aa16.06■□□□□ 0.16
SSBP3-208ENST00000444533 GPRASP2Q96D09 838 aa16.06■□□□□ 0.16
SSBP3-208ENST00000444533 INPP4AQ96PE3 977 aaPredicted RBP16.06■□□□□ 0.16
SSBP3-208ENST00000444533 MLXIPQ9HAP2 919 aa16.06■□□□□ 0.16
SSBP3-208ENST00000444533 SYNRGQ9UMZ2 1314 aa16.05■□□□□ 0.16
SSBP3-208ENST00000444533 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.05■□□□□ 0.16
SSBP3-208ENST00000444533 USP11P51784 963 aa16.05■□□□□ 0.16
SSBP3-208ENST00000444533 GJA9P57773 515 aa16.05■□□□□ 0.16
SSBP3-208ENST00000444533 MRPS9P82933 396 aaKnown RBP16.05■□□□□ 0.16
SSBP3-208ENST00000444533 SETQ01105 290 aaPredicted RBP16.05■□□□□ 0.16
SSBP3-208ENST00000444533 LAMC2Q13753 1193 aa16.05■□□□□ 0.16
SSBP3-208ENST00000444533 BECN1Q14457 450 aa16.05■□□□□ 0.16
SSBP3-208ENST00000444533 CEP55Q53EZ4 464 aa16.05■□□□□ 0.16
SSBP3-208ENST00000444533 GNASQ5JWF2 1037 aa16.05■□□□□ 0.16
SSBP3-208ENST00000444533 INTS4Q96HW7 963 aaKnown RBP16.05■□□□□ 0.16
SSBP3-208ENST00000444533 MOXD2PA6NHM9 499 aa16.04■□□□□ 0.16
SSBP3-208ENST00000444533 NOP56O00567 594 aaKnown RBP16.04■□□□□ 0.16
SSBP3-208ENST00000444533 DTNBO60941 627 aa16.04■□□□□ 0.16
SSBP3-208ENST00000444533 CYP3A4P08684 503 aa16.04■□□□□ 0.16
SSBP3-208ENST00000444533 ICAM3P32942 547 aa16.04■□□□□ 0.16
SSBP3-208ENST00000444533 CUL4AQ13619 759 aa16.04■□□□□ 0.16
SSBP3-208ENST00000444533 LRRC41Q15345 812 aa16.04■□□□□ 0.16
SSBP3-208ENST00000444533 FSCN1Q16658 493 aaKnown RBP16.04■□□□□ 0.16
SSBP3-208ENST00000444533 LY6KQ17RY6 165 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms