RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 KRT78Q8N1N4 520 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 ADAM33Q9BZ11 813 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 TRIT1Q9H3H1 467 aaKnown RBP4.48□□□□□ -1.69
UBR3-206ENST00000444475 GPRC5BQ9NZH0 403 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 DKK3Q9UBP4 350 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 PARP3Q9Y6F1 533 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 HECW2Q9P2P5 1572 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 ROBO2Q9HCK4 1378 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 RNF123Q5XPI4 1314 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 GPR75-ASB3A0A0A6YYF3 556 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 A0A1W2PQH9 124 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 PSDA5PKW4 1024 aaPredicted RBP4.48□□□□□ -1.69
UBR3-206ENST00000444475 F8W031 263 aaPredicted RBP4.48□□□□□ -1.69
UBR3-206ENST00000444475 H3BRJ5 948 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 URI1O94763 535 aaPredicted RBP4.48□□□□□ -1.69
UBR3-206ENST00000444475 SGPL1O95470 568 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 HSPA4LO95757 839 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 ATP1A3P13637 1013 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 HTRA3P83110 453 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 USP4Q13107 963 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 SEMA3AQ14563 771 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 SPDYCQ5MJ68 293 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 ARHGEF18Q6ZSZ5 1173 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 NUP54Q7Z3B4 507 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 NLRP13Q86W25 1043 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 GOLM1Q8NBJ4 401 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 C1orf162Q8NEQ5 155 aaPredicted RBP4.48□□□□□ -1.69
UBR3-206ENST00000444475 IFT22Q9H7X7 185 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 ARHGEF4Q9NR80 690 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 IFT80Q9P2H3 777 aaPredicted RBP4.48□□□□□ -1.69
UBR3-206ENST00000444475 CFAP45Q9UL16 551 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 POLHQ9Y253 713 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 PCDHGA4Q9Y5G9 962 aa4.48□□□□□ -1.69
UBR3-206ENST00000444475 BRD4O60885 1362 aaPredicted RBP4.48□□□□□ -1.69
UBR3-206ENST00000444475 NESP48681 1621 aa4.47□□□□□ -1.69
UBR3-206ENST00000444475 C11orf95C9JLR9 678 aaPredicted RBP4.47□□□□□ -1.69
UBR3-206ENST00000444475 KPNA6O60684 536 aa4.47□□□□□ -1.69
UBR3-206ENST00000444475 GNRH1P01148 92 aa4.47□□□□□ -1.69
UBR3-206ENST00000444475 HNRNPLP14866 589 aaKnown RBP eCLIP4.47□□□□□ -1.693e-8■■■□□ 16.7
UBR3-206ENST00000444475 MAGEA8P43361 318 aa4.47□□□□□ -1.69
UBR3-206ENST00000444475 NPTX2P47972 431 aa4.47□□□□□ -1.69
UBR3-206ENST00000444475 SLC12A2P55011 1212 aa4.47□□□□□ -1.69
UBR3-206ENST00000444475 NR1H2P55055 460 aa4.47□□□□□ -1.69
UBR3-206ENST00000444475 TNFAIP2Q03169 654 aa4.47□□□□□ -1.69
UBR3-206ENST00000444475 CAMK2GQ13555 558 aaPredicted RBP4.47□□□□□ -1.69
UBR3-206ENST00000444475 MMEL1Q495T6 779 aa4.47□□□□□ -1.69
UBR3-206ENST00000444475 MUM1L1Q5H9M0 696 aa4.47□□□□□ -1.69
UBR3-206ENST00000444475 METTL24Q5JXM2 366 aa4.47□□□□□ -1.69
UBR3-206ENST00000444475 UTP14CQ5TAP6 766 aaKnown RBP4.47□□□□□ -1.69
UBR3-206ENST00000444475 GALNTL5Q7Z4T8 443 aa4.47□□□□□ -1.69
UBR3-206ENST00000444475 ESX1Q8N693 406 aa4.47□□□□□ -1.69
UBR3-206ENST00000444475 ANKRD52Q8NB46 1076 aa4.47□□□□□ -1.69
UBR3-206ENST00000444475 TATDN2Q93075 761 aa4.47□□□□□ -1.69
UBR3-206ENST00000444475 CNDP1Q96KN2 507 aa4.47□□□□□ -1.69
UBR3-206ENST00000444475 JAKMIP1Q96N16 626 aaKnown RBP4.47□□□□□ -1.69
UBR3-206ENST00000444475 TTC1Q99614 292 aa4.47□□□□□ -1.69
UBR3-206ENST00000444475 ALG1Q9BT22 464 aa4.47□□□□□ -1.69
UBR3-206ENST00000444475 TCHPQ9BT92 498 aa4.47□□□□□ -1.69
UBR3-206ENST00000444475 DEF6Q9H4E7 631 aa4.47□□□□□ -1.69
UBR3-206ENST00000444475 OSBPL3Q9H4L5 887 aa4.47□□□□□ -1.69
UBR3-206ENST00000444475 C6orf203Q9P0P8 240 aaPredicted RBP4.47□□□□□ -1.69
UBR3-206ENST00000444475 AGTPBP1Q9UPW5 1226 aa4.47□□□□□ -1.69
UBR3-206ENST00000444475 A6NHS1 94 aa4.47□□□□□ -1.69
UBR3-206ENST00000444475 ENDOD1O94919 500 aa4.47□□□□□ -1.69
UBR3-206ENST00000444475 DHRS4L1P0CG22 281 aa4.47□□□□□ -1.69
UBR3-206ENST00000444475 STMN1P16949 149 aa4.47□□□□□ -1.69
UBR3-206ENST00000444475 MTHFRP42898 656 aa4.47□□□□□ -1.69
UBR3-206ENST00000444475 GRM2Q14416 872 aa4.47□□□□□ -1.69
UBR3-206ENST00000444475 SF3B3Q15393 1217 aaKnown RBP4.47□□□□□ -1.69
UBR3-206ENST00000444475 RRP12Q5JTH9 1297 aaKnown RBP4.47□□□□□ -1.69
UBR3-206ENST00000444475 TMCO3Q6UWJ1 677 aa4.47□□□□□ -1.69
UBR3-206ENST00000444475 OVCH2Q7RTZ1 564 aa4.47□□□□□ -1.69
UBR3-206ENST00000444475 CCDC116Q8IYX3 515 aa4.47□□□□□ -1.69
UBR3-206ENST00000444475 LRRC71Q8N4P6 559 aa4.47□□□□□ -1.69
UBR3-206ENST00000444475 GSTCDQ8NEC7 633 aa4.47□□□□□ -1.69
UBR3-206ENST00000444475 OTUD7AQ8TE49 926 aaPredicted RBP4.47□□□□□ -1.69
UBR3-206ENST00000444475 HSPBAP1Q96EW2 488 aa4.47□□□□□ -1.69
UBR3-206ENST00000444475 RIPOR3Q96MK2 946 aa4.47□□□□□ -1.69
UBR3-206ENST00000444475 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.47□□□□□ -1.69
UBR3-206ENST00000444475 QPCTLQ9NXS2 382 aa4.47□□□□□ -1.69
UBR3-206ENST00000444475 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.47□□□□□ -1.69
UBR3-206ENST00000444475 ZNF804BA4D1E1 1349 aa4.47□□□□□ -1.69
UBR3-206ENST00000444475 TRIM75PA6NK02 468 aa4.47□□□□□ -1.69
UBR3-206ENST00000444475 KIF2AO00139 706 aaPredicted RBP4.47□□□□□ -1.69
UBR3-206ENST00000444475 SNUPNO95149 360 aaKnown RBP4.47□□□□□ -1.69
UBR3-206ENST00000444475 C6orf222P0C671 652 aaPredicted RBP4.47□□□□□ -1.69
UBR3-206ENST00000444475 GSTT1P30711 240 aa4.47□□□□□ -1.69
UBR3-206ENST00000444475 SP140Q13342 867 aa4.47□□□□□ -1.69
UBR3-206ENST00000444475 PREPLQ4J6C6 727 aaPredicted RBP4.47□□□□□ -1.69
UBR3-206ENST00000444475 XKR5Q6UX68 686 aa4.47□□□□□ -1.69
UBR3-206ENST00000444475 FAM156AQ8NDB6 213 aa4.47□□□□□ -1.69
UBR3-206ENST00000444475 ARHGAP39Q9C0H5 1083 aa4.47□□□□□ -1.69
UBR3-206ENST00000444475 BRD9Q9H8M2 597 aa4.47□□□□□ -1.69
UBR3-206ENST00000444475 FOXD3Q9UJU5 478 aaPredicted RBP4.47□□□□□ -1.69
UBR3-206ENST00000444475 APOBEC2Q9Y235 224 aaKnown RBP4.47□□□□□ -1.69
UBR3-206ENST00000444475 TACC3Q9Y6A5 838 aa4.47□□□□□ -1.69
UBR3-206ENST00000444475 FLT1P17948 1338 aa4.46□□□□□ -1.69
UBR3-206ENST00000444475 TSPY2A6NKD2 308 aa4.46□□□□□ -1.69
UBR3-206ENST00000444475 LACTBL1A8MY62 500 aa4.46□□□□□ -1.69
UBR3-206ENST00000444475 TADA3O75528 432 aa4.46□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms