RNA–Protein interactions for RNA: ENST00000444166.1

COMMD1-203, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-203ENST00000444166 IFNL3Q8IZI9 196 aa11.93□□□□□ -0.5
COMMD1-203ENST00000444166 KBTBD3Q8NAB2 608 aa11.93□□□□□ -0.5
COMMD1-203ENST00000444166 AFG1LQ8WV93 481 aa11.93□□□□□ -0.5
COMMD1-203ENST00000444166 WNT8BQ93098 351 aa11.93□□□□□ -0.5
COMMD1-203ENST00000444166 SAMD11Q96NU1 681 aa11.93□□□□□ -0.5
COMMD1-203ENST00000444166 CRBNQ96SW2 442 aa11.93□□□□□ -0.5
COMMD1-203ENST00000444166 BCL11AQ9H165 835 aa11.93□□□□□ -0.5
COMMD1-203ENST00000444166 IL17RBQ9NRM6 502 aa11.93□□□□□ -0.5
COMMD1-203ENST00000444166 MUTYHQ9UIF7 546 aa11.93□□□□□ -0.5
COMMD1-203ENST00000444166 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.93□□□□□ -0.5
COMMD1-203ENST00000444166 GVINP1Q7Z2Y8 2422 aa11.93□□□□□ -0.5
COMMD1-203ENST00000444166 WDR87Q6ZQQ6 2873 aa11.92□□□□□ -0.5
COMMD1-203ENST00000444166 M0R2C6 588 aa11.92□□□□□ -0.5
COMMD1-203ENST00000444166 HMMRO75330 724 aa11.92□□□□□ -0.5
COMMD1-203ENST00000444166 LGR5O75473 907 aa11.92□□□□□ -0.5
COMMD1-203ENST00000444166 CALML3P27482 149 aa11.92□□□□□ -0.5
COMMD1-203ENST00000444166 PTPN5P54829 565 aa11.92□□□□□ -0.5
COMMD1-203ENST00000444166 RPS6P62753 249 aaKnown RBP11.92□□□□□ -0.5
COMMD1-203ENST00000444166 PDE4BQ07343 736 aa11.92□□□□□ -0.5
COMMD1-203ENST00000444166 ARHGAP1Q07960 439 aa11.92□□□□□ -0.5
COMMD1-203ENST00000444166 SMAD2Q15796 467 aaKnown RBP11.92□□□□□ -0.5
COMMD1-203ENST00000444166 CTC1Q2NKJ3 1217 aa11.92□□□□□ -0.5
COMMD1-203ENST00000444166 PPP4R3BQ5MIZ7 849 aa11.92□□□□□ -0.5
COMMD1-203ENST00000444166 IER5LQ5T953 404 aa11.92□□□□□ -0.5
COMMD1-203ENST00000444166 TTBK2Q6IQ55 1244 aa11.92□□□□□ -0.5
COMMD1-203ENST00000444166 DNERQ8NFT8 737 aa11.92□□□□□ -0.5
COMMD1-203ENST00000444166 PANK1Q8TE04 598 aa11.92□□□□□ -0.5
COMMD1-203ENST00000444166 NSUN3Q9H649 340 aaKnown RBP11.92□□□□□ -0.5
COMMD1-203ENST00000444166 ALG13Q9NP73 1137 aaKnown RBP11.92□□□□□ -0.5
COMMD1-203ENST00000444166 STX8Q9UNK0 236 aa11.92□□□□□ -0.5
COMMD1-203ENST00000444166 ATG2AQ2TAZ0 1938 aa11.92□□□□□ -0.5
COMMD1-203ENST00000444166 PATL2C9JE40 543 aaKnown RBP11.91□□□□□ -0.5
COMMD1-203ENST00000444166 RNF113AO15541 343 aaKnown RBP11.91□□□□□ -0.5
COMMD1-203ENST00000444166 NMT2O60551 498 aa11.91□□□□□ -0.5
COMMD1-203ENST00000444166 SLC16A2P36021 539 aa11.91□□□□□ -0.5
COMMD1-203ENST00000444166 CHMP4BP1P59074 171 aa11.91□□□□□ -0.5
COMMD1-203ENST00000444166 PPARAQ07869 468 aa11.91□□□□□ -0.5
COMMD1-203ENST00000444166 TCF15Q12870 199 aa11.91□□□□□ -0.5
COMMD1-203ENST00000444166 PTK7Q13308 1070 aa11.91□□□□□ -0.5
COMMD1-203ENST00000444166 GPM6BQ13491 265 aa11.91□□□□□ -0.5
COMMD1-203ENST00000444166 ZNF618Q5T7W0 954 aa11.91□□□□□ -0.5
COMMD1-203ENST00000444166 SYDE2Q5VT97 1194 aa11.91□□□□□ -0.5
COMMD1-203ENST00000444166 RNF207Q6ZRF8 634 aa11.91□□□□□ -0.5
COMMD1-203ENST00000444166 RNF135Q8IUD6 432 aa11.91□□□□□ -0.5
COMMD1-203ENST00000444166 DCAF4Q8WV16 495 aa11.91□□□□□ -0.5
COMMD1-203ENST00000444166 EDAQ92838 391 aa11.91□□□□□ -0.5
COMMD1-203ENST00000444166 HDAC6Q9UBN7 1215 aa11.91□□□□□ -0.5
COMMD1-203ENST00000444166 HAS3O00219 553 aa11.9□□□□□ -0.5
COMMD1-203ENST00000444166 GH1P01241 217 aa11.9□□□□□ -0.5
COMMD1-203ENST00000444166 AMHP03971 560 aa11.9□□□□□ -0.5
COMMD1-203ENST00000444166 APPP05067 770 aa11.9□□□□□ -0.5
COMMD1-203ENST00000444166 ZFYP08048 801 aaPredicted RBP11.9□□□□□ -0.5
COMMD1-203ENST00000444166 DLX2Q07687 328 aaPredicted RBP11.9□□□□□ -0.5
COMMD1-203ENST00000444166 CCDC96Q2M329 555 aa11.9□□□□□ -0.5
COMMD1-203ENST00000444166 RPAINQ86UA6 219 aa11.9□□□□□ -0.5
COMMD1-203ENST00000444166 FBXO11Q86XK2 927 aa11.9□□□□□ -0.5
COMMD1-203ENST00000444166 TMEM192Q8IY95 271 aa11.9□□□□□ -0.5
COMMD1-203ENST00000444166 MYOCDQ8IZQ8 938 aa11.9□□□□□ -0.5
COMMD1-203ENST00000444166 DBF4BQ8NFT6 615 aa11.9□□□□□ -0.5
COMMD1-203ENST00000444166 MPHOSPH6Q99547 160 aaKnown RBP11.9□□□□□ -0.5
COMMD1-203ENST00000444166 POP1Q99575 1024 aaKnown RBP11.9□□□□□ -0.5
COMMD1-203ENST00000444166 CLDND1Q9NY35 253 aa11.9□□□□□ -0.5
COMMD1-203ENST00000444166 VPS13AQ96RL7 3174 aa11.89□□□□□ -0.51
COMMD1-203ENST00000444166 EMSYQ7Z589 1322 aa11.89□□□□□ -0.51
COMMD1-203ENST00000444166 WDR19Q8NEZ3 1342 aa11.89□□□□□ -0.51
COMMD1-203ENST00000444166 DCHS1Q96JQ0 3298 aa11.89□□□□□ -0.51
COMMD1-203ENST00000444166 MBTPS2O43462 519 aa11.89□□□□□ -0.51
COMMD1-203ENST00000444166 NCK2O43639 380 aa11.89□□□□□ -0.51
COMMD1-203ENST00000444166 F2P00734 622 aa11.89□□□□□ -0.51
COMMD1-203ENST00000444166 SLC3A2P08195 630 aaKnown RBP11.89□□□□□ -0.51
COMMD1-203ENST00000444166 CASTP20810 708 aaKnown RBP11.89□□□□□ -0.51
COMMD1-203ENST00000444166 PSEN2P49810 448 aa11.89□□□□□ -0.51
COMMD1-203ENST00000444166 FOXK2Q01167 660 aa11.89□□□□□ -0.51
COMMD1-203ENST00000444166 HIC1Q14526 733 aa11.89□□□□□ -0.51
COMMD1-203ENST00000444166 PLEKHG4Q58EX7 1191 aa11.89□□□□□ -0.51
COMMD1-203ENST00000444166 EP400NLQ6ZTU2 488 aa11.89□□□□□ -0.51
COMMD1-203ENST00000444166 C7orf31Q8N865 590 aa11.89□□□□□ -0.51
COMMD1-203ENST00000444166 PRRX2Q99811 253 aa11.89□□□□□ -0.51
COMMD1-203ENST00000444166 ECHDC1Q9NTX5 307 aa11.89□□□□□ -0.51
COMMD1-203ENST00000444166 ZBTB40Q9NUA8 1239 aa11.89□□□□□ -0.51
COMMD1-203ENST00000444166 PNMA2Q9UL42 364 aa11.89□□□□□ -0.51
COMMD1-203ENST00000444166 NLRC5Q86WI3 1866 aa11.89□□□□□ -0.51
COMMD1-203ENST00000444166 KMT2EQ8IZD2 1858 aa11.89□□□□□ -0.51
COMMD1-203ENST00000444166 TMEM221A6NGB7 291 aa11.88□□□□□ -0.51
COMMD1-203ENST00000444166 TSPY2A6NKD2 308 aa11.88□□□□□ -0.51
COMMD1-203ENST00000444166 M0R296 226 aa11.88□□□□□ -0.51
COMMD1-203ENST00000444166 FOXP2O15409 715 aa11.88□□□□□ -0.51
COMMD1-203ENST00000444166 LINC00271P0C7V0 271 aa11.88□□□□□ -0.51
COMMD1-203ENST00000444166 HOXD8P13378 290 aaPredicted RBP11.88□□□□□ -0.51
COMMD1-203ENST00000444166 ZNF200P98182 395 aaPredicted RBP11.88□□□□□ -0.51
COMMD1-203ENST00000444166 HYAL1Q12794 435 aa11.88□□□□□ -0.51
COMMD1-203ENST00000444166 SMAD4Q13485 552 aaKnown RBP11.88□□□□□ -0.51
COMMD1-203ENST00000444166 PKN1Q16512 942 aa11.88□□□□□ -0.51
COMMD1-203ENST00000444166 DGKDQ16760 1214 aa11.88□□□□□ -0.51
COMMD1-203ENST00000444166 LY6KQ17RY6 165 aa11.88□□□□□ -0.51
COMMD1-203ENST00000444166 TRIM67Q6ZTA4 783 aa11.88□□□□□ -0.51
COMMD1-203ENST00000444166 TOP1MTQ969P6 601 aa11.88□□□□□ -0.51
COMMD1-203ENST00000444166 EMID1Q96A84 441 aaPredicted RBP11.88□□□□□ -0.51
COMMD1-203ENST00000444166 NACAP1Q9BZK3 213 aa11.88□□□□□ -0.51
COMMD1-203ENST00000444166 INCENPQ9NQS7 918 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms