RNA–Protein interactions for RNA: ENST00000443780.5

UBE2D4-205, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-205ENST00000443780 SYNE3Q6ZMZ3 975 aa23.57■■□□□ 1.36
UBE2D4-205ENST00000443780 VSIG10LQ86VR7 867 aa23.57■■□□□ 1.36
UBE2D4-205ENST00000443780 MICU3Q86XE3 530 aa23.57■■□□□ 1.36
UBE2D4-205ENST00000443780 KCNB2Q92953 911 aa23.57■■□□□ 1.36
UBE2D4-205ENST00000443780 DOCK5Q9H7D0 1870 aa23.56■■□□□ 1.36
UBE2D4-205ENST00000443780 APOA5Q6Q788 366 aa23.56■■□□□ 1.36
UBE2D4-205ENST00000443780 TMTC3Q6ZXV5 915 aa23.56■■□□□ 1.36
UBE2D4-205ENST00000443780 IL31RAQ8NI17 732 aa23.56■■□□□ 1.36
UBE2D4-205ENST00000443780 TRPV6Q9H1D0 765 aa23.56■■□□□ 1.36
UBE2D4-205ENST00000443780 MRVI1Q9Y6F6 885 aa23.56■■□□□ 1.36
UBE2D4-205ENST00000443780 TRIP12Q14669 1992 aaPredicted RBP23.56■■□□□ 1.36
UBE2D4-205ENST00000443780 B4GALT4O60513 344 aa23.55■■□□□ 1.36
UBE2D4-205ENST00000443780 RGS20O76081 388 aa23.55■■□□□ 1.36
UBE2D4-205ENST00000443780 HMGB1P09429 215 aaKnown RBP23.55■■□□□ 1.36
UBE2D4-205ENST00000443780 HSPA4P34932 840 aa23.55■■□□□ 1.36
UBE2D4-205ENST00000443780 CCDC82Q8N4S0 544 aa23.55■■□□□ 1.36
UBE2D4-205ENST00000443780 AFG1LQ8WV93 481 aa23.55■■□□□ 1.36
UBE2D4-205ENST00000443780 PPP1R12CQ9BZL4 782 aa23.55■■□□□ 1.36
UBE2D4-205ENST00000443780 BRPF3Q9ULD4 1205 aa23.55■■□□□ 1.36
UBE2D4-205ENST00000443780 CCND2P30279 289 aa23.54■■□□□ 1.36
UBE2D4-205ENST00000443780 ALDH8A1Q9H2A2 487 aaPredicted RBP23.54■■□□□ 1.36
UBE2D4-205ENST00000443780 PPP4R2Q9NY27 417 aa23.54■■□□□ 1.36
UBE2D4-205ENST00000443780 hCG_1642624A0A1W2PR95 340 aa23.53■■□□□ 1.36
UBE2D4-205ENST00000443780 REC8O95072 547 aa23.53■■□□□ 1.36
UBE2D4-205ENST00000443780 MMP3P08254 477 aa23.53■■□□□ 1.36
UBE2D4-205ENST00000443780 NBPF20Q3BBV1 942 aa23.53■■□□□ 1.36
UBE2D4-205ENST00000443780 KCNV1Q6PIU1 500 aa23.53■■□□□ 1.36
UBE2D4-205ENST00000443780 CUL5Q93034 780 aa23.53■■□□□ 1.36
UBE2D4-205ENST00000443780 EMID1Q96A84 441 aaPredicted RBP23.53■■□□□ 1.36
UBE2D4-205ENST00000443780 RBM28Q9NW13 759 aaKnown RBP23.53■■□□□ 1.36
UBE2D4-205ENST00000443780 SNX14Q9Y5W7 946 aa23.53■■□□□ 1.36
UBE2D4-205ENST00000443780 FRMPD4Q14CM0 1322 aa23.53■■□□□ 1.36
UBE2D4-205ENST00000443780 PIK3CDO00329 1044 aa23.52■■□□□ 1.36
UBE2D4-205ENST00000443780 MEIS2O14770 477 aa23.52■■□□□ 1.36
UBE2D4-205ENST00000443780 ZBTB43O43298 467 aa23.52■■□□□ 1.36
UBE2D4-205ENST00000443780 CYP2C18P33260 490 aa23.52■■□□□ 1.36
UBE2D4-205ENST00000443780 LAMC2Q13753 1193 aa23.52■■□□□ 1.36
UBE2D4-205ENST00000443780 ERICH6BQ5W0A0 696 aa23.52■■□□□ 1.36
UBE2D4-205ENST00000443780 USP17L6PQ6QN14 398 aa23.52■■□□□ 1.36
UBE2D4-205ENST00000443780 TMEM199Q8N511 208 aa23.52■■□□□ 1.36
UBE2D4-205ENST00000443780 SMARCC2Q8TAQ2 1214 aa23.52■■□□□ 1.36
UBE2D4-205ENST00000443780 ZFP91Q96JP5 570 aaPredicted RBP23.52■■□□□ 1.36
UBE2D4-205ENST00000443780 HIPK3Q9H422 1215 aa23.52■■□□□ 1.36
UBE2D4-205ENST00000443780 LAMA2P24043 3122 aaKnown RBP23.52■■□□□ 1.36
UBE2D4-205ENST00000443780 CPA1P15085 419 aa23.51■■□□□ 1.35
UBE2D4-205ENST00000443780 PPIGQ13427 754 aaKnown RBP eCLIP23.51■■□□□ 1.35
UBE2D4-205ENST00000443780 RTN1Q16799 776 aa23.51■■□□□ 1.35
UBE2D4-205ENST00000443780 FAM47CQ5HY64 1035 aa23.51■■□□□ 1.35
UBE2D4-205ENST00000443780 NFRKBQ6P4R8 1299 aa23.51■■□□□ 1.35
UBE2D4-205ENST00000443780 DHX37Q8IY37 1157 aaKnown RBP23.51■■□□□ 1.35
UBE2D4-205ENST00000443780 JAKMIP1Q96N16 626 aaKnown RBP23.51■■□□□ 1.35
UBE2D4-205ENST00000443780 NOC4LQ9BVI4 516 aaKnown RBP23.51■■□□□ 1.35
UBE2D4-205ENST00000443780 TRMT13Q9NUP7 481 aaKnown RBP23.51■■□□□ 1.35
UBE2D4-205ENST00000443780 SCN5AQ14524 2016 aa23.5■■□□□ 1.35
UBE2D4-205ENST00000443780 KLF18A0A0U1RQI7 1052 aa23.5■■□□□ 1.35
UBE2D4-205ENST00000443780 SUPT20HL2P0C7V6 817 aa23.5■■□□□ 1.35
UBE2D4-205ENST00000443780 TGFB3P10600 412 aa23.5■■□□□ 1.35
UBE2D4-205ENST00000443780 CSF2RAP15509 400 aa23.5■■□□□ 1.35
UBE2D4-205ENST00000443780 CASTP20810 708 aaKnown RBP23.5■■□□□ 1.35
UBE2D4-205ENST00000443780 MRPS9P82933 396 aaKnown RBP23.5■■□□□ 1.35
UBE2D4-205ENST00000443780 PPP1R13LQ8WUF5 828 aa23.5■■□□□ 1.35
UBE2D4-205ENST00000443780 RNPC3Q96LT9 517 aaKnown RBP23.5■■□□□ 1.35
UBE2D4-205ENST00000443780 PSTPIP2Q9H939 334 aa23.5■■□□□ 1.35
UBE2D4-205ENST00000443780 UMODL1Q5DID0 1318 aa23.5■■□□□ 1.35
UBE2D4-205ENST00000443780 CNTNAP5Q8WYK1 1306 aa23.5■■□□□ 1.35
UBE2D4-205ENST00000443780 STAM2O75886 525 aa23.49■■□□□ 1.35
UBE2D4-205ENST00000443780 RCAN1P53805 252 aa23.49■■□□□ 1.35
UBE2D4-205ENST00000443780 FGD1P98174 961 aa23.49■■□□□ 1.35
UBE2D4-205ENST00000443780 PTPN11Q06124 597 aaPredicted RBP23.49■■□□□ 1.35
UBE2D4-205ENST00000443780 FUT2Q10981 343 aa23.49■■□□□ 1.35
UBE2D4-205ENST00000443780 DGKDQ16760 1214 aa23.49■■□□□ 1.35
UBE2D4-205ENST00000443780 CELF3Q5SZQ8 465 aaKnown RBP23.49■■□□□ 1.35
UBE2D4-205ENST00000443780 MYSM1Q5VVJ2 828 aa23.49■■□□□ 1.35
UBE2D4-205ENST00000443780 BLOC1S2Q6QNY1 142 aa23.49■■□□□ 1.35
UBE2D4-205ENST00000443780 Q7L0L9 218 aa23.49■■□□□ 1.35
UBE2D4-205ENST00000443780 C16orf59Q7L2K0 433 aa23.49■■□□□ 1.35
UBE2D4-205ENST00000443780 DEFB123Q8N688 67 aa23.49■■□□□ 1.35
UBE2D4-205ENST00000443780 PPTC7Q8NI37 304 aa23.49■■□□□ 1.35
UBE2D4-205ENST00000443780 GPKOWQ92917 476 aaPredicted RBP eCLIP23.49■■□□□ 1.35
UBE2D4-205ENST00000443780 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.49■■□□□ 1.35
UBE2D4-205ENST00000443780 GOLGA8AA7E2F4 631 aa23.48■■□□□ 1.35
UBE2D4-205ENST00000443780 GOLGA8BA8MQT2 603 aa23.48■■□□□ 1.35
UBE2D4-205ENST00000443780 GGPS1O95749 300 aa23.48■■□□□ 1.35
UBE2D4-205ENST00000443780 SP2Q02086 613 aa23.48■■□□□ 1.35
UBE2D4-205ENST00000443780 Q6ZUG5 572 aa23.48■■□□□ 1.35
UBE2D4-205ENST00000443780 HEATR3Q7Z4Q2 680 aa23.48■■□□□ 1.35
UBE2D4-205ENST00000443780 KAT2BQ92831 832 aa23.48■■□□□ 1.35
UBE2D4-205ENST00000443780 INPP4AQ96PE3 977 aaPredicted RBP23.48■■□□□ 1.35
UBE2D4-205ENST00000443780 FAM217BQ9NTX9 383 aaPredicted RBP23.48■■□□□ 1.35
UBE2D4-205ENST00000443780 EPB41L2O43491 1005 aaKnown RBP23.47■■□□□ 1.35
UBE2D4-205ENST00000443780 CYP2C9P11712 490 aa23.47■■□□□ 1.35
UBE2D4-205ENST00000443780 UBA1P22314 1058 aaKnown RBP23.47■■□□□ 1.35
UBE2D4-205ENST00000443780 ICAM3P32942 547 aa23.47■■□□□ 1.35
UBE2D4-205ENST00000443780 CHMP4BP1P59074 171 aa23.47■■□□□ 1.35
UBE2D4-205ENST00000443780 GNPTABQ3T906 1256 aa23.47■■□□□ 1.35
UBE2D4-205ENST00000443780 TMEM240Q5SV17 173 aa23.47■■□□□ 1.35
UBE2D4-205ENST00000443780 PCNX4Q63HM2 1172 aa23.47■■□□□ 1.35
UBE2D4-205ENST00000443780 IL23AQ9NPF7 189 aa23.47■■□□□ 1.35
UBE2D4-205ENST00000443780 RTEL1Q9NZ71 1219 aa23.47■■□□□ 1.35
UBE2D4-205ENST00000443780 KAT6AQ92794 2004 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms