RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 CYP2C18P33260 490 aa23.19■■□□□ 1.3
LRCH3-208ENST00000443727 PGM5Q15124 567 aa23.19■■□□□ 1.3
LRCH3-208ENST00000443727 MICU3Q86XE3 530 aa23.19■■□□□ 1.3
LRCH3-208ENST00000443727 CMTR1Q8N1G2 835 aaKnown RBP23.19■■□□□ 1.3
LRCH3-208ENST00000443727 CUL5Q93034 780 aa23.19■■□□□ 1.3
LRCH3-208ENST00000443727 DDX41Q9UJV9 622 aaKnown RBP23.19■■□□□ 1.3
LRCH3-208ENST00000443727 SUPT20HL2P0C7V6 817 aa23.18■■□□□ 1.3
LRCH3-208ENST00000443727 CSF2RAP15509 400 aa23.18■■□□□ 1.3
LRCH3-208ENST00000443727 ARHGAP1Q07960 439 aa23.18■■□□□ 1.3
LRCH3-208ENST00000443727 NBPF20Q3BBV1 942 aa23.18■■□□□ 1.3
LRCH3-208ENST00000443727 DHX32Q7L7V1 743 aaKnown RBP23.18■■□□□ 1.3
LRCH3-208ENST00000443727 VSIG10LQ86VR7 867 aa23.18■■□□□ 1.3
LRCH3-208ENST00000443727 RASEFQ8IZ41 740 aa23.18■■□□□ 1.3
LRCH3-208ENST00000443727 CCDC82Q8N4S0 544 aa23.18■■□□□ 1.3
LRCH3-208ENST00000443727 SRBD1Q8N5C6 995 aaKnown RBP23.18■■□□□ 1.3
LRCH3-208ENST00000443727 FANCBQ8NB91 859 aa23.18■■□□□ 1.3
LRCH3-208ENST00000443727 SMARCC2Q8TAQ2 1214 aa23.18■■□□□ 1.3
LRCH3-208ENST00000443727 FGD1P98174 961 aa23.17■■□□□ 1.3
LRCH3-208ENST00000443727 KCNV1Q6PIU1 500 aa23.17■■□□□ 1.3
LRCH3-208ENST00000443727 SGMS1Q86VZ5 419 aa23.17■■□□□ 1.3
LRCH3-208ENST00000443727 IL31RAQ8NI17 732 aa23.17■■□□□ 1.3
LRCH3-208ENST00000443727 TCEANC2Q96MN5 208 aa23.17■■□□□ 1.3
LRCH3-208ENST00000443727 TRMT13Q9NUP7 481 aaKnown RBP23.17■■□□□ 1.3
LRCH3-208ENST00000443727 MMP3P08254 477 aa23.16■■□□□ 1.3
LRCH3-208ENST00000443727 HMGB1P09429 215 aaKnown RBP23.16■■□□□ 1.3
LRCH3-208ENST00000443727 CASTP20810 708 aaKnown RBP23.16■■□□□ 1.3
LRCH3-208ENST00000443727 LAMC2Q13753 1193 aa23.16■■□□□ 1.3
LRCH3-208ENST00000443727 DGKDQ16760 1214 aa23.16■■□□□ 1.3
LRCH3-208ENST00000443727 ADCK5Q3MIX3 580 aa23.16■■□□□ 1.3
LRCH3-208ENST00000443727 TSGA10IPQ3SY00 556 aa23.16■■□□□ 1.3
LRCH3-208ENST00000443727 DHX37Q8IY37 1157 aaKnown RBP23.16■■□□□ 1.3
LRCH3-208ENST00000443727 ACRP10323 421 aa23.15■■□□□ 1.3
LRCH3-208ENST00000443727 CCL23P55773 120 aa23.15■■□□□ 1.3
LRCH3-208ENST00000443727 EXOSC10Q01780 885 aaKnown RBP23.15■■□□□ 1.3
LRCH3-208ENST00000443727 NFRKBQ6P4R8 1299 aa23.15■■□□□ 1.3
LRCH3-208ENST00000443727 TMTC3Q6ZXV5 915 aa23.15■■□□□ 1.3
LRCH3-208ENST00000443727 PPP1R13LQ8WUF5 828 aa23.15■■□□□ 1.3
LRCH3-208ENST00000443727 ZFP91Q96JP5 570 aaPredicted RBP23.15■■□□□ 1.3
LRCH3-208ENST00000443727 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.15■■□□□ 1.3
LRCH3-208ENST00000443727 NOC4LQ9BVI4 516 aaKnown RBP23.15■■□□□ 1.3
LRCH3-208ENST00000443727 NAP1L2Q9ULW6 460 aaPredicted RBP23.15■■□□□ 1.3
LRCH3-208ENST00000443727 NOD1Q9Y239 953 aa23.15■■□□□ 1.3
LRCH3-208ENST00000443727 hCG_1642624A0A1W2PR95 340 aa23.14■■□□□ 1.29
LRCH3-208ENST00000443727 SORBS3O60504 671 aa23.14■■□□□ 1.29
LRCH3-208ENST00000443727 CYP2C9P11712 490 aa23.14■■□□□ 1.29
LRCH3-208ENST00000443727 SMAD3P84022 425 aaKnown RBP23.14■■□□□ 1.29
LRCH3-208ENST00000443727 ZNF697Q5TEC3 545 aa23.14■■□□□ 1.29
LRCH3-208ENST00000443727 PSRC1Q6PGN9 363 aaPredicted RBP23.14■■□□□ 1.29
LRCH3-208ENST00000443727 APOA5Q6Q788 366 aa23.14■■□□□ 1.29
LRCH3-208ENST00000443727 USP17L6PQ6QN14 398 aa23.14■■□□□ 1.29
LRCH3-208ENST00000443727 EMID1Q96A84 441 aaPredicted RBP23.14■■□□□ 1.29
LRCH3-208ENST00000443727 RBM28Q9NW13 759 aaKnown RBP23.14■■□□□ 1.29
LRCH3-208ENST00000443727 UMODL1Q5DID0 1318 aa23.13■■□□□ 1.29
LRCH3-208ENST00000443727 ZBTB43O43298 467 aa23.13■■□□□ 1.29
LRCH3-208ENST00000443727 RGS20O76081 388 aa23.13■■□□□ 1.29
LRCH3-208ENST00000443727 REC8O95072 547 aa23.13■■□□□ 1.29
LRCH3-208ENST00000443727 TGFB3P10600 412 aa23.13■■□□□ 1.29
LRCH3-208ENST00000443727 PTPN11Q06124 597 aaPredicted RBP23.13■■□□□ 1.29
LRCH3-208ENST00000443727 RTN1Q16799 776 aa23.13■■□□□ 1.29
LRCH3-208ENST00000443727 GNPTABQ3T906 1256 aa23.13■■□□□ 1.29
LRCH3-208ENST00000443727 FAM109BQ6ICB4 259 aaPredicted RBP23.13■■□□□ 1.29
LRCH3-208ENST00000443727 PPTC7Q8NI37 304 aa23.13■■□□□ 1.29
LRCH3-208ENST00000443727 FAM161BQ96MY7 647 aa23.13■■□□□ 1.29
LRCH3-208ENST00000443727 PSTPIP2Q9H939 334 aa23.13■■□□□ 1.29
LRCH3-208ENST00000443727 IL23AQ9NPF7 189 aa23.13■■□□□ 1.29
LRCH3-208ENST00000443727 MTMR10Q9NXD2 777 aa23.13■■□□□ 1.29
LRCH3-208ENST00000443727 GGPS1O95749 300 aa23.12■■□□□ 1.29
LRCH3-208ENST00000443727 TMEM240Q5SV17 173 aa23.12■■□□□ 1.29
LRCH3-208ENST00000443727 CELF3Q5SZQ8 465 aaKnown RBP23.12■■□□□ 1.29
LRCH3-208ENST00000443727 ZNF365Q70YC5 407 aa23.12■■□□□ 1.29
LRCH3-208ENST00000443727 C16orf59Q7L2K0 433 aa23.12■■□□□ 1.29
LRCH3-208ENST00000443727 HEATR3Q7Z4Q2 680 aa23.12■■□□□ 1.29
LRCH3-208ENST00000443727 SPATA33Q96N06 139 aa23.12■■□□□ 1.29
LRCH3-208ENST00000443727 MLXIPQ9HAP2 919 aa23.12■■□□□ 1.29
LRCH3-208ENST00000443727 BRPF3Q9ULD4 1205 aa23.12■■□□□ 1.29
LRCH3-208ENST00000443727 KIAA1217Q5T5P2 1943 aa23.12■■□□□ 1.29
LRCH3-208ENST00000443727 KLF18A0A0U1RQI7 1052 aa23.11■■□□□ 1.29
LRCH3-208ENST00000443727 PIK3CDO00329 1044 aa23.11■■□□□ 1.29
LRCH3-208ENST00000443727 STAM2O75886 525 aa23.11■■□□□ 1.29
LRCH3-208ENST00000443727 MYSM1Q5VVJ2 828 aa23.11■■□□□ 1.29
LRCH3-208ENST00000443727 JAKMIP1Q96N16 626 aaKnown RBP23.11■■□□□ 1.29
LRCH3-208ENST00000443727 KATNAL1Q9BW62 490 aa23.11■■□□□ 1.29
LRCH3-208ENST00000443727 MTIF3Q9H2K0 278 aaKnown RBP23.11■■□□□ 1.29
LRCH3-208ENST00000443727 RTEL1Q9NZ71 1219 aa23.11■■□□□ 1.29
LRCH3-208ENST00000443727 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.1■■□□□ 1.29
LRCH3-208ENST00000443727 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.1■■□□□ 1.29
LRCH3-208ENST00000443727 GOLGA8AA7E2F4 631 aa23.1■■□□□ 1.29
LRCH3-208ENST00000443727 GOLGA8BA8MQT2 603 aa23.1■■□□□ 1.29
LRCH3-208ENST00000443727 MEIS2O14770 477 aa23.1■■□□□ 1.29
LRCH3-208ENST00000443727 ZNF286BP0CG31 522 aa23.1■■□□□ 1.29
LRCH3-208ENST00000443727 UBA1P22314 1058 aaKnown RBP23.1■■□□□ 1.29
LRCH3-208ENST00000443727 HSPA4P34932 840 aa23.1■■□□□ 1.29
LRCH3-208ENST00000443727 RPUSD2Q8IZ73 545 aaKnown RBP23.1■■□□□ 1.29
LRCH3-208ENST00000443727 C7orf31Q8N865 590 aa23.1■■□□□ 1.29
LRCH3-208ENST00000443727 RETREG2Q8NC44 543 aa23.1■■□□□ 1.29
LRCH3-208ENST00000443727 WNT8AQ9H1J5 351 aa23.1■■□□□ 1.29
LRCH3-208ENST00000443727 FRMPD4Q14CM0 1322 aa23.09■■□□□ 1.29
LRCH3-208ENST00000443727 SCN10AQ9Y5Y9 1956 aa23.09■■□□□ 1.29
LRCH3-208ENST00000443727 PPFIA4O75335 1185 aa23.09■■□□□ 1.29
LRCH3-208ENST00000443727 FGBP02675 491 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms