RNA–Protein interactions for RNA: ENST00000443574.1

HLA-DQB1-206, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-206ENST00000443574 PGM5Q15124 567 aa11.88□□□□□ -0.51
HLA-DQB1-206ENST00000443574 FSCN1Q16658 493 aaKnown RBP11.88□□□□□ -0.51
HLA-DQB1-206ENST00000443574 PFKFB3Q16875 520 aaPredicted RBP11.88□□□□□ -0.51
HLA-DQB1-206ENST00000443574 GNASQ5JWF2 1037 aa11.88□□□□□ -0.51
HLA-DQB1-206ENST00000443574 WWC2Q6AWC2 1192 aa11.88□□□□□ -0.51
HLA-DQB1-206ENST00000443574 MCTP2Q6DN12 878 aa11.88□□□□□ -0.51
HLA-DQB1-206ENST00000443574 XRRA1Q6P2D8 792 aa11.88□□□□□ -0.51
HLA-DQB1-206ENST00000443574 OR6J1Q8NGC5 347 aa11.88□□□□□ -0.51
HLA-DQB1-206ENST00000443574 ALDH8A1Q9H2A2 487 aaPredicted RBP11.88□□□□□ -0.51
HLA-DQB1-206ENST00000443574 SLKQ9H2G2 1235 aaPredicted RBP11.88□□□□□ -0.51
HLA-DQB1-206ENST00000443574 STARD7Q9NQZ5 370 aa11.88□□□□□ -0.51
HLA-DQB1-206ENST00000443574 BARHL2Q9NY43 387 aa11.88□□□□□ -0.51
HLA-DQB1-206ENST00000443574 PRKAG2Q9UGJ0 569 aa11.88□□□□□ -0.51
HLA-DQB1-206ENST00000443574 GNEQ9Y223 722 aaKnown RBP11.88□□□□□ -0.51
HLA-DQB1-206ENST00000443574 V9GY48 417 aaPredicted RBP11.88□□□□□ -0.51
HLA-DQB1-206ENST00000443574 LTBP2Q14767 1821 aa11.88□□□□□ -0.51
HLA-DQB1-206ENST00000443574 A0A1W2PQ45 241 aaPredicted RBP11.87□□□□□ -0.51
HLA-DQB1-206ENST00000443574 A0A1W2PQY0 241 aa11.87□□□□□ -0.51
HLA-DQB1-206ENST00000443574 ADCY6O43306 1168 aa11.87□□□□□ -0.51
HLA-DQB1-206ENST00000443574 PRPF3O43395 683 aaKnown RBP11.87□□□□□ -0.51
HLA-DQB1-206ENST00000443574 CABYRO75952 493 aa11.87□□□□□ -0.51
HLA-DQB1-206ENST00000443574 FOSP01100 380 aaPredicted RBP11.87□□□□□ -0.51
HLA-DQB1-206ENST00000443574 SMPD1P17405 629 aa11.87□□□□□ -0.51
HLA-DQB1-206ENST00000443574 GNA11P29992 359 aa11.87□□□□□ -0.51
HLA-DQB1-206ENST00000443574 NEK4P51957 841 aa11.87□□□□□ -0.51
HLA-DQB1-206ENST00000443574 ACLYP53396 1101 aa11.87□□□□□ -0.51
HLA-DQB1-206ENST00000443574 SSRP1Q08945 709 aaKnown RBP11.87□□□□□ -0.51
HLA-DQB1-206ENST00000443574 FUT2Q10981 343 aa11.87□□□□□ -0.51
HLA-DQB1-206ENST00000443574 STK3Q13188 491 aa11.87□□□□□ -0.51
HLA-DQB1-206ENST00000443574 AP3B2Q13367 1082 aa11.87□□□□□ -0.51
HLA-DQB1-206ENST00000443574 USP17L6PQ6QN14 398 aa11.87□□□□□ -0.51
HLA-DQB1-206ENST00000443574 SEPT14Q6ZU15 432 aa11.87□□□□□ -0.51
HLA-DQB1-206ENST00000443574 C7orf61Q8IZ16 206 aa11.87□□□□□ -0.51
HLA-DQB1-206ENST00000443574 KLHDC9Q8NEP7 349 aa11.87□□□□□ -0.51
HLA-DQB1-206ENST00000443574 BICD2Q8TD16 824 aa11.87□□□□□ -0.51
HLA-DQB1-206ENST00000443574 FERMT2Q96AC1 680 aa11.87□□□□□ -0.51
HLA-DQB1-206ENST00000443574 SLC26A6Q9BXS9 759 aa11.87□□□□□ -0.51
HLA-DQB1-206ENST00000443574 C6orf50Q9HD87 102 aa11.87□□□□□ -0.51
HLA-DQB1-206ENST00000443574 RIC8AQ9NPQ8 531 aa11.87□□□□□ -0.51
HLA-DQB1-206ENST00000443574 PDGFCQ9NRA1 345 aa11.87□□□□□ -0.51
HLA-DQB1-206ENST00000443574 FAM217BQ9NTX9 383 aaPredicted RBP11.87□□□□□ -0.51
HLA-DQB1-206ENST00000443574 POLR3EQ9NVU0 708 aa11.87□□□□□ -0.51
HLA-DQB1-206ENST00000443574 DDX49Q9Y6V7 483 aaKnown RBP11.87□□□□□ -0.51
HLA-DQB1-206ENST00000443574 ESYT2A0FGR8 921 aa11.86□□□□□ -0.51
HLA-DQB1-206ENST00000443574 STXBP3O00186 592 aa11.86□□□□□ -0.51
HLA-DQB1-206ENST00000443574 MEIS2O14770 477 aa11.86□□□□□ -0.51
HLA-DQB1-206ENST00000443574 DYNC1LI2O43237 492 aaPredicted RBP11.86□□□□□ -0.51
HLA-DQB1-206ENST00000443574 DEXIO95424 95 aa11.86□□□□□ -0.51
HLA-DQB1-206ENST00000443574 SEC24BO95487 1268 aa11.86□□□□□ -0.51
HLA-DQB1-206ENST00000443574 GH1P01241 217 aa11.86□□□□□ -0.51
HLA-DQB1-206ENST00000443574 ASGR1P07306 291 aa11.86□□□□□ -0.51
HLA-DQB1-206ENST00000443574 ATN1P54259 1190 aaPredicted RBP11.86□□□□□ -0.51
HLA-DQB1-206ENST00000443574 AK2P54819 239 aa11.86□□□□□ -0.51
HLA-DQB1-206ENST00000443574 NKX3-2P78367 333 aa11.86□□□□□ -0.51
HLA-DQB1-206ENST00000443574 KCNA10Q16322 511 aa11.86□□□□□ -0.51
HLA-DQB1-206ENST00000443574 C1orf53Q5VUE5 145 aa11.86□□□□□ -0.51
HLA-DQB1-206ENST00000443574 PCNX4Q63HM2 1172 aa11.86□□□□□ -0.51
HLA-DQB1-206ENST00000443574 IL27Q8NEV9 243 aa11.86□□□□□ -0.51
HLA-DQB1-206ENST00000443574 PHKBQ93100 1093 aa11.86□□□□□ -0.51
HLA-DQB1-206ENST00000443574 VTI1AQ96AJ9 217 aa11.86□□□□□ -0.51
HLA-DQB1-206ENST00000443574 CDHR1Q96JP9 859 aa11.86□□□□□ -0.51
HLA-DQB1-206ENST00000443574 SEZ6LQ9BYH1 1024 aa11.86□□□□□ -0.51
HLA-DQB1-206ENST00000443574 C22orf23Q9BZE7 217 aa11.86□□□□□ -0.51
HLA-DQB1-206ENST00000443574 NCOA5Q9HCD5 579 aaKnown RBP11.86□□□□□ -0.51
HLA-DQB1-206ENST00000443574 SCN10AQ9Y5Y9 1956 aa11.86□□□□□ -0.51
HLA-DQB1-206ENST00000443574 DNAH12Q6ZR08 3092 aa11.86□□□□□ -0.51
HLA-DQB1-206ENST00000443574 ELP1O95163 1332 aa11.86□□□□□ -0.51
HLA-DQB1-206ENST00000443574 STK36Q9NRP7 1315 aa11.86□□□□□ -0.51
HLA-DQB1-206ENST00000443574 A0A0U1RQG5 324 aaPredicted RBP11.85□□□□□ -0.51
HLA-DQB1-206ENST00000443574 MYADML2A6NDP7 307 aa11.85□□□□□ -0.51
HLA-DQB1-206ENST00000443574 SMCO2A6NFE2 343 aa11.85□□□□□ -0.51
HLA-DQB1-206ENST00000443574 FIBPO43427 364 aa11.85□□□□□ -0.51
HLA-DQB1-206ENST00000443574 KPNA6O60684 536 aa11.85□□□□□ -0.51
HLA-DQB1-206ENST00000443574 TGFB3P10600 412 aa11.85□□□□□ -0.51
HLA-DQB1-206ENST00000443574 XBP1P17861 261 aa11.85□□□□□ -0.51
HLA-DQB1-206ENST00000443574 RTP1P59025 263 aa11.85□□□□□ -0.51
HLA-DQB1-206ENST00000443574 SNX17Q15036 470 aa11.85□□□□□ -0.51
HLA-DQB1-206ENST00000443574 NTRK3Q16288 839 aa11.85□□□□□ -0.51
HLA-DQB1-206ENST00000443574 UBE2SQ16763 222 aa11.85□□□□□ -0.51
HLA-DQB1-206ENST00000443574 LRRC26Q2I0M4 334 aa11.85□□□□□ -0.51
HLA-DQB1-206ENST00000443574 SLC39A5Q6ZMH5 540 aa11.85□□□□□ -0.51
HLA-DQB1-206ENST00000443574 NLRX1Q86UT6 975 aa11.85□□□□□ -0.51
HLA-DQB1-206ENST00000443574 VSIG10LQ86VR7 867 aa11.85□□□□□ -0.51
HLA-DQB1-206ENST00000443574 FAM177A1Q8N128 213 aaPredicted RBP11.85□□□□□ -0.51
HLA-DQB1-206ENST00000443574 REXO1Q8N1G1 1221 aaKnown RBP11.85□□□□□ -0.51
HLA-DQB1-206ENST00000443574 ATP11BQ9Y2G3 1177 aa11.85□□□□□ -0.51
HLA-DQB1-206ENST00000443574 GTF3C3Q9Y5Q9 886 aa11.85□□□□□ -0.51
HLA-DQB1-206ENST00000443574 TLR3O15455 904 aaKnown RBP11.84□□□□□ -0.51
HLA-DQB1-206ENST00000443574 PFKFB2O60825 505 aa11.84□□□□□ -0.51
HLA-DQB1-206ENST00000443574 BEX3Q00994 111 aa11.84□□□□□ -0.51
HLA-DQB1-206ENST00000443574 LAMC2Q13753 1193 aa11.84□□□□□ -0.51
HLA-DQB1-206ENST00000443574 GIMAP8Q8ND71 665 aaPredicted RBP11.84□□□□□ -0.51
HLA-DQB1-206ENST00000443574 IL31RAQ8NI17 732 aa11.84□□□□□ -0.51
HLA-DQB1-206ENST00000443574 WASF1Q92558 559 aa11.84□□□□□ -0.51
HLA-DQB1-206ENST00000443574 INPP4AQ96PE3 977 aaPredicted RBP11.84□□□□□ -0.51
HLA-DQB1-206ENST00000443574 ANO3Q9BYT9 981 aa11.84□□□□□ -0.51
HLA-DQB1-206ENST00000443574 ZMYND12Q9H0C1 365 aa11.84□□□□□ -0.51
HLA-DQB1-206ENST00000443574 SH3GLB2Q9NR46 395 aa11.84□□□□□ -0.51
HLA-DQB1-206ENST00000443574 PCDHA6Q9UN73 950 aa11.84□□□□□ -0.51
HLA-DQB1-206ENST00000443574 PCDHA8Q9Y5H6 950 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 136.7 ms