RNA–Protein interactions for RNA: ENST00000443247.1

AC003001.1-201, humanhuman

TSL 5 BASIC

Gene AC003001.1, Length 1,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003001.1-201ENST00000443247 LCNL1Q6ZST4 164 aa6.72□□□□□ -1.33
AC003001.1-201ENST00000443247 AMIGO3Q86WK7 504 aa6.72□□□□□ -1.33
AC003001.1-201ENST00000443247 DCP2Q8IU60 420 aaKnown RBP6.72□□□□□ -1.33
AC003001.1-201ENST00000443247 ALG3Q92685 438 aa6.72□□□□□ -1.33
AC003001.1-201ENST00000443247 TRMT2BQ96GJ1 504 aaKnown RBP6.72□□□□□ -1.33
AC003001.1-201ENST00000443247 TMEM169Q96HH4 297 aa6.72□□□□□ -1.33
AC003001.1-201ENST00000443247 PHF20Q9BVI0 1012 aa6.72□□□□□ -1.33
AC003001.1-201ENST00000443247 BLACEA4D250 179 aa6.71□□□□□ -1.34
AC003001.1-201ENST00000443247 IRS4O14654 1257 aaPredicted RBP6.71□□□□□ -1.34
AC003001.1-201ENST00000443247 NUAK1O60285 661 aa6.71□□□□□ -1.34
AC003001.1-201ENST00000443247 FBLN1P23142 703 aa6.71□□□□□ -1.34
AC003001.1-201ENST00000443247 LSAMPQ13449 338 aa6.71□□□□□ -1.34
AC003001.1-201ENST00000443247 NTRK3Q16288 839 aa6.71□□□□□ -1.34
AC003001.1-201ENST00000443247 LRP10Q7Z4F1 713 aa6.71□□□□□ -1.34
AC003001.1-201ENST00000443247 Q8N1Y9 231 aa6.71□□□□□ -1.34
AC003001.1-201ENST00000443247 TSPAN17Q96FV3 270 aa6.71□□□□□ -1.34
AC003001.1-201ENST00000443247 CDC6Q99741 560 aa6.71□□□□□ -1.34
AC003001.1-201ENST00000443247 GPR27Q9NS67 375 aa6.71□□□□□ -1.34
AC003001.1-201ENST00000443247 KCTD3Q9Y597 815 aa6.71□□□□□ -1.34
AC003001.1-201ENST00000443247 X6R8D5 127 aa6.71□□□□□ -1.34
AC003001.1-201ENST00000443247 KDM2BQ8NHM5 1336 aa6.71□□□□□ -1.34
AC003001.1-201ENST00000443247 RFXAPO00287 272 aa6.7□□□□□ -1.34
AC003001.1-201ENST00000443247 BUB1BO60566 1050 aaPredicted RBP6.7□□□□□ -1.34
AC003001.1-201ENST00000443247 MSCO60682 206 aa6.7□□□□□ -1.34
AC003001.1-201ENST00000443247 PFKLP17858 780 aa6.7□□□□□ -1.34
AC003001.1-201ENST00000443247 SLC9A5Q14940 896 aa6.7□□□□□ -1.34
AC003001.1-201ENST00000443247 MROH9Q5TGP6 573 aa6.7□□□□□ -1.34
AC003001.1-201ENST00000443247 RIOX2Q8IUF8 465 aa6.7□□□□□ -1.34
AC003001.1-201ENST00000443247 ZBTB38Q8NAP3 1195 aaPredicted RBP6.7□□□□□ -1.34
AC003001.1-201ENST00000443247 DCAF4Q8WV16 495 aa6.7□□□□□ -1.34
AC003001.1-201ENST00000443247 MKL1Q969V6 931 aa6.7□□□□□ -1.34
AC003001.1-201ENST00000443247 DRC1Q96MC2 740 aa6.7□□□□□ -1.34
AC003001.1-201ENST00000443247 AP5M1Q9H0R1 490 aa6.7□□□□□ -1.34
AC003001.1-201ENST00000443247 IRF2BPLQ9H1B7 796 aa6.7□□□□□ -1.34
AC003001.1-201ENST00000443247 OSBPL2Q9H1P3 480 aa6.7□□□□□ -1.34
AC003001.1-201ENST00000443247 CLDND1Q9NY35 253 aa6.7□□□□□ -1.34
AC003001.1-201ENST00000443247 COA3Q9Y2R0 106 aaPredicted RBP6.7□□□□□ -1.34
AC003001.1-201ENST00000443247 IRS2Q9Y4H2 1338 aa6.7□□□□□ -1.34
AC003001.1-201ENST00000443247 H7BY64 318 aa6.69□□□□□ -1.34
AC003001.1-201ENST00000443247 ASGR2P07307 311 aa6.69□□□□□ -1.34
AC003001.1-201ENST00000443247 FAM153BP0C7A2 387 aa6.69□□□□□ -1.34
AC003001.1-201ENST00000443247 PMLP29590 882 aa6.69□□□□□ -1.34
AC003001.1-201ENST00000443247 MC3RP41968 323 aa6.69□□□□□ -1.34
AC003001.1-201ENST00000443247 TARBP2Q15633 366 aaKnown RBP6.69□□□□□ -1.34
AC003001.1-201ENST00000443247 ZNF385BQ569K4 471 aa6.69□□□□□ -1.34
AC003001.1-201ENST00000443247 FOXB2Q5VYV0 432 aa6.69□□□□□ -1.34
AC003001.1-201ENST00000443247 KCNT2Q6UVM3 1135 aa6.69□□□□□ -1.34
AC003001.1-201ENST00000443247 RSPO2Q6UXX9 243 aaPredicted RBP6.69□□□□□ -1.34
AC003001.1-201ENST00000443247 TMEFF1Q8IYR6 380 aa6.69□□□□□ -1.34
AC003001.1-201ENST00000443247 PANK1Q8TE04 598 aa6.69□□□□□ -1.34
AC003001.1-201ENST00000443247 DNAJC7Q99615 494 aa6.69□□□□□ -1.34
AC003001.1-201ENST00000443247 TRBV23-1A0A0A0MS06 115 aa6.68□□□□□ -1.34
AC003001.1-201ENST00000443247 SGSM2O43147 1006 aa6.68□□□□□ -1.34
AC003001.1-201ENST00000443247 ZBTB7AO95365 584 aa6.68□□□□□ -1.34
AC003001.1-201ENST00000443247 IGFBP6P24592 240 aaPredicted RBP6.68□□□□□ -1.34
AC003001.1-201ENST00000443247 LIMS1P48059 325 aa6.68□□□□□ -1.34
AC003001.1-201ENST00000443247 SLC6A11P48066 632 aa6.68□□□□□ -1.34
AC003001.1-201ENST00000443247 FAM209AQ5JX71 171 aa6.68□□□□□ -1.34
AC003001.1-201ENST00000443247 STYK1Q6J9G0 422 aa6.68□□□□□ -1.34
AC003001.1-201ENST00000443247 SEC14L1Q92503 715 aa6.68□□□□□ -1.34
AC003001.1-201ENST00000443247 RNF38Q9H0F5 515 aa6.68□□□□□ -1.34
AC003001.1-201ENST00000443247 EPB41L4AQ9HCS5 686 aaPredicted RBP6.68□□□□□ -1.34
AC003001.1-201ENST00000443247 PPARGC1AQ9UBK2 798 aaKnown RBP6.68□□□□□ -1.34
AC003001.1-201ENST00000443247 FAN1Q9Y2M0 1017 aa6.68□□□□□ -1.34
AC003001.1-201ENST00000443247 NCAM1P13591 858 aa6.67□□□□□ -1.34
AC003001.1-201ENST00000443247 ATF2P15336 505 aa6.67□□□□□ -1.34
AC003001.1-201ENST00000443247 SUMO1P63165 101 aaKnown RBP6.67□□□□□ -1.34
AC003001.1-201ENST00000443247 BMS1Q14692 1282 aaKnown RBP6.67□□□□□ -1.34
AC003001.1-201ENST00000443247 CNKSR3Q6P9H4 555 aa6.67□□□□□ -1.34
AC003001.1-201ENST00000443247 FAM129CQ86XR2 697 aa6.67□□□□□ -1.34
AC003001.1-201ENST00000443247 SCUBE1Q8IWY4 988 aa6.67□□□□□ -1.34
AC003001.1-201ENST00000443247 UBXN4Q92575 508 aa6.67□□□□□ -1.34
AC003001.1-201ENST00000443247 EXOC2Q96KP1 924 aa6.67□□□□□ -1.34
AC003001.1-201ENST00000443247 IPO9Q96P70 1041 aaKnown RBP6.67□□□□□ -1.34
AC003001.1-201ENST00000443247 PALD1Q9ULE6 856 aa6.67□□□□□ -1.34
AC003001.1-201ENST00000443247 DGKIO75912 1065 aa6.66□□□□□ -1.34
AC003001.1-201ENST00000443247 GPR85P60893 370 aa6.66□□□□□ -1.34
AC003001.1-201ENST00000443247 LBX2Q6XYB7 198 aa6.66□□□□□ -1.34
AC003001.1-201ENST00000443247 ZFYVE21Q9BQ24 234 aa6.66□□□□□ -1.34
AC003001.1-201ENST00000443247 CDIP1Q9H305 208 aa6.66□□□□□ -1.34
AC003001.1-201ENST00000443247 EPB41L1Q9H4G0 881 aa6.66□□□□□ -1.34
AC003001.1-201ENST00000443247 CDK11AQ9UQ88 783 aaPredicted RBP6.66□□□□□ -1.34
AC003001.1-201ENST00000443247 TRAF6Q9Y4K3 522 aa6.66□□□□□ -1.34
AC003001.1-201ENST00000443247 ASXL2Q76L83 1435 aa6.66□□□□□ -1.34
AC003001.1-201ENST00000443247 GRK2P25098 689 aa6.65□□□□□ -1.34
AC003001.1-201ENST00000443247 GRK3P35626 688 aa6.65□□□□□ -1.34
AC003001.1-201ENST00000443247 AFF3P51826 1226 aaKnown RBP6.65□□□□□ -1.34
AC003001.1-201ENST00000443247 NFE2L2Q16236 605 aa6.65□□□□□ -1.34
AC003001.1-201ENST00000443247 KIZQ2M2Z5 673 aa6.65□□□□□ -1.34
AC003001.1-201ENST00000443247 STEAP3Q658P3 488 aa6.65□□□□□ -1.34
AC003001.1-201ENST00000443247 DPH6Q7L8W6 267 aa6.65□□□□□ -1.34
AC003001.1-201ENST00000443247 MILR1Q7Z6M3 343 aa6.65□□□□□ -1.34
AC003001.1-201ENST00000443247 IFNL3Q8IZI9 196 aa6.65□□□□□ -1.34
AC003001.1-201ENST00000443247 PWWP2AQ96N64 755 aa6.65□□□□□ -1.34
AC003001.1-201ENST00000443247 JAM3Q9BX67 310 aa6.65□□□□□ -1.34
AC003001.1-201ENST00000443247 MRPS23Q9Y3D9 190 aaKnown RBP6.65□□□□□ -1.34
AC003001.1-201ENST00000443247 HGSO14964 777 aaPredicted RBP6.64□□□□□ -1.35
AC003001.1-201ENST00000443247 C6orf222P0C671 652 aaPredicted RBP6.64□□□□□ -1.35
AC003001.1-201ENST00000443247 FOXO4P98177 505 aa6.64□□□□□ -1.35
AC003001.1-201ENST00000443247 CHRNA2Q15822 529 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms