RNA–Protein interactions for RNA: ENST00000443003.2

RPSA-202, Transcript of ribosomal protein SA, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RPSA, Length 1,032 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-202ENST00000443003 NKRFO15226 690 aaKnown RBP eCLIP8.78□□□□□ -1
RPSA-202ENST00000443003 GSPT1P15170 499 aaKnown RBP8.78□□□□□ -1
RPSA-202ENST00000443003 PTPN11Q06124 597 aaPredicted RBP8.78□□□□□ -1
RPSA-202ENST00000443003 MCMDC2Q4G0Z9 681 aa8.78□□□□□ -1
RPSA-202ENST00000443003 RRP12Q5JTH9 1297 aaKnown RBP8.78□□□□□ -1
RPSA-202ENST00000443003 PPP4R3BQ5MIZ7 849 aa8.78□□□□□ -1
RPSA-202ENST00000443003 SYDE2Q5VT97 1194 aa8.78□□□□□ -1
RPSA-202ENST00000443003 PTCRAQ6ISU1 281 aaPredicted RBP8.78□□□□□ -1
RPSA-202ENST00000443003 CNKSR3Q6P9H4 555 aa8.78□□□□□ -1
RPSA-202ENST00000443003 EP400NLQ6ZTU2 488 aa8.78□□□□□ -1
RPSA-202ENST00000443003 LRRC8DQ7L1W4 858 aa8.78□□□□□ -1
RPSA-202ENST00000443003 CAGE1Q8TC20 777 aa8.78□□□□□ -1
RPSA-202ENST00000443003 AFAP1L1Q8TED9 768 aa8.78□□□□□ -1
RPSA-202ENST00000443003 SCFD2Q8WU76 684 aa8.78□□□□□ -1
RPSA-202ENST00000443003 DCAF4Q8WV16 495 aa8.78□□□□□ -1
RPSA-202ENST00000443003 SUGCTQ9HAC7 445 aa8.78□□□□□ -1
RPSA-202ENST00000443003 IL17RBQ9NRM6 502 aa8.78□□□□□ -1
RPSA-202ENST00000443003 RALGAPA2Q2PPJ7 1873 aa8.77□□□□□ -1.01
RPSA-202ENST00000443003 RBM47A0AV96 593 aaKnown RBP8.77□□□□□ -1.01
RPSA-202ENST00000443003 LINC01553A4QN01 128 aa8.77□□□□□ -1.01
RPSA-202ENST00000443003 A6NJR5 290 aa8.77□□□□□ -1.01
RPSA-202ENST00000443003 PRR33A8MZF0 331 aa8.77□□□□□ -1.01
RPSA-202ENST00000443003 H3BQ06 376 aaPredicted RBP8.77□□□□□ -1.01
RPSA-202ENST00000443003 KPNA6O60684 536 aa8.77□□□□□ -1.01
RPSA-202ENST00000443003 PLA2G6O60733 806 aa8.77□□□□□ -1.01
RPSA-202ENST00000443003 EIF5BO60841 1220 aaKnown RBP8.77□□□□□ -1.01
RPSA-202ENST00000443003 ARIH2O95376 493 aa8.77□□□□□ -1.01
RPSA-202ENST00000443003 GJB5O95377 273 aa8.77□□□□□ -1.01
RPSA-202ENST00000443003 MMP3P08254 477 aa8.77□□□□□ -1.01
RPSA-202ENST00000443003 SELPP16109 830 aa8.77□□□□□ -1.01
RPSA-202ENST00000443003 MRE11P49959 708 aa8.77□□□□□ -1.01
RPSA-202ENST00000443003 RPS6P62753 249 aaKnown RBP8.77□□□□□ -1.01
RPSA-202ENST00000443003 TCTN1Q2MV58 587 aa8.77□□□□□ -1.01
RPSA-202ENST00000443003 USH1GQ495M9 461 aa8.77□□□□□ -1.01
RPSA-202ENST00000443003 GDF6Q6KF10 455 aaPredicted RBP8.77□□□□□ -1.01
RPSA-202ENST00000443003 CWC27Q6UX04 472 aaKnown RBP8.77□□□□□ -1.01
RPSA-202ENST00000443003 SEPT14Q6ZU15 432 aa8.77□□□□□ -1.01
RPSA-202ENST00000443003 FAM178BQ8IXR5 827 aa8.77□□□□□ -1.01
RPSA-202ENST00000443003 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.77□□□□□ -1.01
RPSA-202ENST00000443003 AFG1LQ8WV93 481 aa8.77□□□□□ -1.01
RPSA-202ENST00000443003 TGS1Q96RS0 853 aaKnown RBP8.77□□□□□ -1.01
RPSA-202ENST00000443003 C17orf80Q9BSJ5 609 aa8.77□□□□□ -1.01
RPSA-202ENST00000443003 ALG1Q9BT22 464 aa8.77□□□□□ -1.01
RPSA-202ENST00000443003 LOC102724159A0A0B4J2E5 919 aa8.76□□□□□ -1.01
RPSA-202ENST00000443003 NBNO60934 754 aa8.76□□□□□ -1.01
RPSA-202ENST00000443003 ZNF286BP0CG31 522 aa8.76□□□□□ -1.01
RPSA-202ENST00000443003 ERVK-21P61565 698 aa8.76□□□□□ -1.01
RPSA-202ENST00000443003 NMIQ13287 307 aaPredicted RBP8.76□□□□□ -1.01
RPSA-202ENST00000443003 PWP2Q15269 919 aaKnown RBP8.76□□□□□ -1.01
RPSA-202ENST00000443003 LEXMQ3ZCV2 418 aa8.76□□□□□ -1.01
RPSA-202ENST00000443003 MYOCDQ8IZQ8 938 aa8.76□□□□□ -1.01
RPSA-202ENST00000443003 FBXO22Q8NEZ5 403 aa8.76□□□□□ -1.01
RPSA-202ENST00000443003 CLEC4DQ8WXI8 215 aa8.76□□□□□ -1.01
RPSA-202ENST00000443003 DHX38Q92620 1227 aaKnown RBP8.76□□□□□ -1.01
RPSA-202ENST00000443003 CTAGE1Q96RT6 745 aa8.76□□□□□ -1.01
RPSA-202ENST00000443003 RAD9AQ99638 391 aa8.76□□□□□ -1.01
RPSA-202ENST00000443003 LMCD1Q9NZU5 365 aa8.76□□□□□ -1.01
RPSA-202ENST00000443003 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.76□□□□□ -1.01
RPSA-202ENST00000443003 DOCK5Q9H7D0 1870 aa8.76□□□□□ -1.01
RPSA-202ENST00000443003 CCDC171Q6TFL3 1326 aa8.76□□□□□ -1.01
RPSA-202ENST00000443003 PIEZO1Q92508 2521 aa8.75□□□□□ -1.01
RPSA-202ENST00000443003 A0A0D9SFI3 127 aa8.75□□□□□ -1.01
RPSA-202ENST00000443003 B4DLN1 442 aa8.75□□□□□ -1.01
RPSA-202ENST00000443003 SORBS3O60504 671 aa8.75□□□□□ -1.01
RPSA-202ENST00000443003 CDC45O75419 566 aa8.75□□□□□ -1.01
RPSA-202ENST00000443003 CSPG5O95196 566 aa8.75□□□□□ -1.01
RPSA-202ENST00000443003 GH1P01241 217 aa8.75□□□□□ -1.01
RPSA-202ENST00000443003 CKBP12277 381 aa8.75□□□□□ -1.01
RPSA-202ENST00000443003 ALADP13716 330 aa8.75□□□□□ -1.01
RPSA-202ENST00000443003 EDNRBP24530 442 aa8.75□□□□□ -1.01
RPSA-202ENST00000443003 CHMLP26374 656 aa8.75□□□□□ -1.01
RPSA-202ENST00000443003 MRPL12P52815 198 aaKnown RBP8.75□□□□□ -1.01
RPSA-202ENST00000443003 IKBKEQ14164 716 aa8.75□□□□□ -1.01
RPSA-202ENST00000443003 GPNMBQ14956 572 aa8.75□□□□□ -1.01
RPSA-202ENST00000443003 LY6KQ17RY6 165 aa8.75□□□□□ -1.01
RPSA-202ENST00000443003 C7orf31Q8N865 590 aa8.75□□□□□ -1.01
RPSA-202ENST00000443003 FAM227BQ96M60 508 aa8.75□□□□□ -1.01
RPSA-202ENST00000443003 TMEM47Q9BQJ4 181 aa8.75□□□□□ -1.01
RPSA-202ENST00000443003 HDAC6Q9UBN7 1215 aa8.75□□□□□ -1.01
RPSA-202ENST00000443003 GTF2IRD1Q9UHL9 959 aa8.75□□□□□ -1.01
RPSA-202ENST00000443003 ZMYM6O95789 1325 aa8.75□□□□□ -1.01
RPSA-202ENST00000443003 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.74□□□□□ -1.01
RPSA-202ENST00000443003 ABHD14A-ACY1A0A1B0GW23 586 aa8.74□□□□□ -1.01
RPSA-202ENST00000443003 GRXCR2A6NFK2 248 aa8.74□□□□□ -1.01
RPSA-202ENST00000443003 FOXP2O15409 715 aa8.74□□□□□ -1.01
RPSA-202ENST00000443003 DCXO43602 365 aa8.74□□□□□ -1.01
RPSA-202ENST00000443003 CXCL10P02778 98 aa8.74□□□□□ -1.01
RPSA-202ENST00000443003 PDHBP11177 359 aa8.74□□□□□ -1.01
RPSA-202ENST00000443003 TOP1P11387 765 aaKnown RBP8.74□□□□□ -1.01
RPSA-202ENST00000443003 CASTP20810 708 aaKnown RBP8.74□□□□□ -1.01
RPSA-202ENST00000443003 PSEN2P49810 448 aa8.74□□□□□ -1.01
RPSA-202ENST00000443003 NHLH1Q02575 133 aa8.74□□□□□ -1.01
RPSA-202ENST00000443003 ARHGAP1Q07960 439 aa8.74□□□□□ -1.01
RPSA-202ENST00000443003 VPS53Q5VIR6 699 aa8.74□□□□□ -1.01
RPSA-202ENST00000443003 BTNL9Q6UXG8 535 aa8.74□□□□□ -1.01
RPSA-202ENST00000443003 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.74□□□□□ -1.01not detected■■□□□ 13.7
RPSA-202ENST00000443003 DHX37Q8IY37 1157 aaKnown RBP8.74□□□□□ -1.01
RPSA-202ENST00000443003 DNERQ8NFT8 737 aa8.74□□□□□ -1.01
RPSA-202ENST00000443003 KAT2BQ92831 832 aa8.74□□□□□ -1.01
RPSA-202ENST00000443003 WNT8BQ93098 351 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms