RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 KCNB2Q92953 911 aa24.3■■□□□ 1.48
CDKN3-204ENST00000442975 CUL5Q93034 780 aa24.3■■□□□ 1.48
CDKN3-204ENST00000442975 RBM28Q9NW13 759 aaKnown RBP24.3■■□□□ 1.48
CDKN3-204ENST00000442975 GH1P01241 217 aa24.29■■□□□ 1.48
CDKN3-204ENST00000442975 PURAQ00577 322 aaKnown RBP24.29■■□□□ 1.48
CDKN3-204ENST00000442975 SMARCC2Q8TAQ2 1214 aa24.29■■□□□ 1.48
CDKN3-204ENST00000442975 LRCH3Q96II8 777 aa24.29■■□□□ 1.48
CDKN3-204ENST00000442975 ZFP91Q96JP5 570 aaPredicted RBP24.29■■□□□ 1.48
CDKN3-204ENST00000442975 MTG1Q9BT17 334 aaPredicted RBP24.29■■□□□ 1.48
CDKN3-204ENST00000442975 TBX21Q9UL17 535 aa24.29■■□□□ 1.48
CDKN3-204ENST00000442975 CHMP4BP1P59074 171 aa24.28■■□□□ 1.48
CDKN3-204ENST00000442975 AFG1LQ8WV93 481 aa24.28■■□□□ 1.48
CDKN3-204ENST00000442975 GPKOWQ92917 476 aaPredicted RBP eCLIP24.28■■□□□ 1.48
CDKN3-204ENST00000442975 GRIN2DO15399 1336 aa24.28■■□□□ 1.48
CDKN3-204ENST00000442975 CNTNAP5Q8WYK1 1306 aa24.28■■□□□ 1.48
CDKN3-204ENST00000442975 LTBP2Q14767 1821 aa24.28■■□□□ 1.48
CDKN3-204ENST00000442975 MYH6P13533 1939 aa24.27■■□□□ 1.48
CDKN3-204ENST00000442975 A6NJR5 290 aa24.27■■□□□ 1.48
CDKN3-204ENST00000442975 SORBS3O60504 671 aa24.27■■□□□ 1.48
CDKN3-204ENST00000442975 ARHGAP1Q07960 439 aa24.27■■□□□ 1.48
CDKN3-204ENST00000442975 USP17L6PQ6QN14 398 aa24.27■■□□□ 1.48
CDKN3-204ENST00000442975 Q6ZUG5 572 aa24.27■■□□□ 1.48
CDKN3-204ENST00000442975 BRF1Q92994 677 aa24.27■■□□□ 1.48
CDKN3-204ENST00000442975 PPP1R12CQ9BZL4 782 aa24.27■■□□□ 1.48
CDKN3-204ENST00000442975 CASTP20810 708 aaKnown RBP24.26■■□□□ 1.47
CDKN3-204ENST00000442975 RPS6KB1P23443 525 aa24.26■■□□□ 1.47
CDKN3-204ENST00000442975 FPGSQ05932 587 aa24.26■■□□□ 1.47
CDKN3-204ENST00000442975 APOBRQ0VD83 1088 aa24.26■■□□□ 1.47
CDKN3-204ENST00000442975 FAM47CQ5HY64 1035 aa24.26■■□□□ 1.47
CDKN3-204ENST00000442975 VSIG10LQ86VR7 867 aa24.26■■□□□ 1.47
CDKN3-204ENST00000442975 SLC43A3Q8NBI5 491 aa24.26■■□□□ 1.47
CDKN3-204ENST00000442975 TRPV6Q9H1D0 765 aa24.26■■□□□ 1.47
CDKN3-204ENST00000442975 DDX41Q9UJV9 622 aaKnown RBP24.26■■□□□ 1.47
CDKN3-204ENST00000442975 BAZ2BQ9UIF8 2168 aaKnown RBP24.26■■□□□ 1.47
CDKN3-204ENST00000442975 SZT2Q5T011 3432 aa24.25■■□□□ 1.47
CDKN3-204ENST00000442975 RGS20O76081 388 aa24.25■■□□□ 1.47
CDKN3-204ENST00000442975 MMP3P08254 477 aa24.25■■□□□ 1.47
CDKN3-204ENST00000442975 PSMA5P28066 241 aa24.25■■□□□ 1.47
CDKN3-204ENST00000442975 METAP2P50579 478 aaKnown RBP eCLIP24.25■■□□□ 1.47
CDKN3-204ENST00000442975 LRIT3Q3SXY7 679 aa24.25■■□□□ 1.47
CDKN3-204ENST00000442975 C9orf50Q5SZB4 431 aa24.25■■□□□ 1.47
CDKN3-204ENST00000442975 PPP1R13LQ8WUF5 828 aa24.25■■□□□ 1.47
CDKN3-204ENST00000442975 PSTPIP2Q9H939 334 aa24.25■■□□□ 1.47
CDKN3-204ENST00000442975 B4GALT4O60513 344 aa24.24■■□□□ 1.47
CDKN3-204ENST00000442975 KPNA6O60684 536 aa24.24■■□□□ 1.47
CDKN3-204ENST00000442975 TIMP1P01033 207 aa24.24■■□□□ 1.47
CDKN3-204ENST00000442975 UBE2SQ16763 222 aa24.24■■□□□ 1.47
CDKN3-204ENST00000442975 SEZ6LQ9BYH1 1024 aa24.24■■□□□ 1.47
CDKN3-204ENST00000442975 ALDH8A1Q9H2A2 487 aaPredicted RBP24.24■■□□□ 1.47
CDKN3-204ENST00000442975 FRMPD4Q14CM0 1322 aa24.24■■□□□ 1.47
CDKN3-204ENST00000442975 PIK3CDO00329 1044 aa24.23■■□□□ 1.47
CDKN3-204ENST00000442975 MEIS2O14770 477 aa24.23■■□□□ 1.47
CDKN3-204ENST00000442975 CD4P01730 458 aa24.23■■□□□ 1.47
CDKN3-204ENST00000442975 UBA1P22314 1058 aaKnown RBP24.23■■□□□ 1.47
CDKN3-204ENST00000442975 RCAN1P53805 252 aa24.23■■□□□ 1.47
CDKN3-204ENST00000442975 EPHB4P54760 987 aa24.23■■□□□ 1.47
CDKN3-204ENST00000442975 SHHQ15465 462 aa24.23■■□□□ 1.47
CDKN3-204ENST00000442975 WWC2Q6AWC2 1192 aa24.23■■□□□ 1.47
CDKN3-204ENST00000442975 DHX37Q8IY37 1157 aaKnown RBP24.23■■□□□ 1.47
CDKN3-204ENST00000442975 TRMT13Q9NUP7 481 aaKnown RBP24.23■■□□□ 1.47
CDKN3-204ENST00000442975 GGPS1O95749 300 aa24.22■■□□□ 1.47
CDKN3-204ENST00000442975 CDC27P30260 824 aa24.22■■□□□ 1.47
CDKN3-204ENST00000442975 NAPAP54920 295 aa24.22■■□□□ 1.47
CDKN3-204ENST00000442975 LAMC2Q13753 1193 aa24.22■■□□□ 1.47
CDKN3-204ENST00000442975 NBPF20Q3BBV1 942 aa24.22■■□□□ 1.47
CDKN3-204ENST00000442975 GNPTABQ3T906 1256 aa24.22■■□□□ 1.47
CDKN3-204ENST00000442975 KCNV1Q6PIU1 500 aa24.22■■□□□ 1.47
CDKN3-204ENST00000442975 HIPK3Q9H422 1215 aa24.22■■□□□ 1.47
CDKN3-204ENST00000442975 V9GY48 417 aaPredicted RBP24.22■■□□□ 1.47
CDKN3-204ENST00000442975 ZNF286BP0CG31 522 aa24.21■■□□□ 1.47
CDKN3-204ENST00000442975 CYP2C18P33260 490 aa24.21■■□□□ 1.47
CDKN3-204ENST00000442975 FUT2Q10981 343 aa24.21■■□□□ 1.47
CDKN3-204ENST00000442975 DGKDQ16760 1214 aa24.21■■□□□ 1.47
CDKN3-204ENST00000442975 MFSD5Q6N075 450 aa24.21■■□□□ 1.47
CDKN3-204ENST00000442975 PPTC7Q8NI37 304 aa24.21■■□□□ 1.47
CDKN3-204ENST00000442975 EMID1Q96A84 441 aaPredicted RBP24.21■■□□□ 1.47
CDKN3-204ENST00000442975 RTEL1Q9NZ71 1219 aa24.21■■□□□ 1.47
CDKN3-204ENST00000442975 CCDC196A0A1B0GTZ2 297 aa24.2■■□□□ 1.46
CDKN3-204ENST00000442975 SPDYE3A6NKU9 549 aa24.2■■□□□ 1.46
CDKN3-204ENST00000442975 EPB41L2O43491 1005 aaKnown RBP24.2■■□□□ 1.46
CDKN3-204ENST00000442975 MRPS9P82933 396 aaKnown RBP24.2■■□□□ 1.46
CDKN3-204ENST00000442975 TMEM199Q8N511 208 aa24.2■■□□□ 1.46
CDKN3-204ENST00000442975 RNPC3Q96LT9 517 aaKnown RBP24.2■■□□□ 1.46
CDKN3-204ENST00000442975 SPATA33Q96N06 139 aa24.2■■□□□ 1.46
CDKN3-204ENST00000442975 USP26Q9BXU7 913 aa24.2■■□□□ 1.46
CDKN3-204ENST00000442975 FAM217BQ9NTX9 383 aaPredicted RBP24.2■■□□□ 1.46
CDKN3-204ENST00000442975 UMODL1Q5DID0 1318 aa24.19■■□□□ 1.46
CDKN3-204ENST00000442975 STAM2O75886 525 aa24.19■■□□□ 1.46
CDKN3-204ENST00000442975 ADD1P35611 737 aaKnown RBP24.19■■□□□ 1.46
CDKN3-204ENST00000442975 PPIGQ13427 754 aaKnown RBP eCLIP24.19■■□□□ 1.46
CDKN3-204ENST00000442975 CELF3Q5SZQ8 465 aaKnown RBP24.19■■□□□ 1.46
CDKN3-204ENST00000442975 PCNX4Q63HM2 1172 aa24.19■■□□□ 1.46
CDKN3-204ENST00000442975 PPP1R18Q6NYC8 613 aa24.19■■□□□ 1.46
CDKN3-204ENST00000442975 INPP4AQ96PE3 977 aaPredicted RBP24.19■■□□□ 1.46
CDKN3-204ENST00000442975 NOD1Q9Y239 953 aa24.19■■□□□ 1.46
CDKN3-204ENST00000442975 CYP2C9P11712 490 aa24.18■■□□□ 1.46
CDKN3-204ENST00000442975 CSF2RAP15509 400 aa24.18■■□□□ 1.46
CDKN3-204ENST00000442975 ADCY7P51828 1080 aa24.18■■□□□ 1.46
CDKN3-204ENST00000442975 SP2Q02086 613 aa24.18■■□□□ 1.46
CDKN3-204ENST00000442975 TYW1BQ6NUM6 668 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms