RNA–Protein interactions for RNA: ENST00000442956.1

LINC00299-202, long intergenic non-protein coding RNA 299, humanhuman

TSL 2 BASIC

Gene LINC00299, Length 2,342 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-202ENST00000442956 FMR1Q06787 632 aaKnown RBP eCLIP16.41■□□□□ 0.22
LINC00299-202ENST00000442956 HS1BP3Q53T59 392 aa16.41■□□□□ 0.22
LINC00299-202ENST00000442956 MOB2Q70IA6 237 aa16.41■□□□□ 0.22
LINC00299-202ENST00000442956 SMYD4Q8IYR2 804 aaPredicted RBP16.41■□□□□ 0.22
LINC00299-202ENST00000442956 COL20A1Q9P218 1284 aa16.41■□□□□ 0.22
LINC00299-202ENST00000442956 STK17AQ9UEE5 414 aa16.41■□□□□ 0.22
LINC00299-202ENST00000442956 POTECB2RU33 542 aa16.41■□□□□ 0.22
LINC00299-202ENST00000442956 TTLL12Q14166 644 aaPredicted RBP16.41■□□□□ 0.22
LINC00299-202ENST00000442956 REPS2Q8NFH8 660 aa16.41■□□□□ 0.22
LINC00299-202ENST00000442956 TRERF1Q96PN7 1200 aa16.41■□□□□ 0.22
LINC00299-202ENST00000442956 ELP3Q9H9T3 547 aa16.41■□□□□ 0.22
LINC00299-202ENST00000442956 BLOC1S4Q9NUP1 217 aa16.41■□□□□ 0.22
LINC00299-202ENST00000442956 ADAMTS5Q9UNA0 930 aa16.41■□□□□ 0.22
LINC00299-202ENST00000442956 CD44P16070 742 aaKnown RBP16.4■□□□□ 0.22
LINC00299-202ENST00000442956 CCT6AP40227 531 aaKnown RBP16.4■□□□□ 0.22
LINC00299-202ENST00000442956 SPIRE1Q08AE8 756 aa16.4■□□□□ 0.22
LINC00299-202ENST00000442956 DHX8Q14562 1220 aaKnown RBP16.4■□□□□ 0.22
LINC00299-202ENST00000442956 TMEM119Q4V9L6 283 aa16.4■□□□□ 0.22
LINC00299-202ENST00000442956 ANKRD13AQ8IZ07 590 aa16.4■□□□□ 0.22
LINC00299-202ENST00000442956 CLMNQ96JQ2 1002 aa16.4■□□□□ 0.22
LINC00299-202ENST00000442956 TRIM9Q9C026 710 aa16.4■□□□□ 0.22
LINC00299-202ENST00000442956 HSD3B7Q9H2F3 369 aa16.4■□□□□ 0.22
LINC00299-202ENST00000442956 PHIPQ8WWQ0 1821 aa16.4■□□□□ 0.22
LINC00299-202ENST00000442956 ERCC5P28715 1186 aaPredicted RBP16.4■□□□□ 0.22
LINC00299-202ENST00000442956 AMPD3Q01432 767 aa16.4■□□□□ 0.22
LINC00299-202ENST00000442956 ECM1Q16610 540 aa16.4■□□□□ 0.22
LINC00299-202ENST00000442956 CEP55Q53EZ4 464 aa16.4■□□□□ 0.22
LINC00299-202ENST00000442956 PNMA8AQ86V59 439 aaPredicted RBP16.4■□□□□ 0.22
LINC00299-202ENST00000442956 SPC24Q8NBT2 197 aa16.4■□□□□ 0.22
LINC00299-202ENST00000442956 SYTL5Q8TDW5 730 aaPredicted RBP16.4■□□□□ 0.22
LINC00299-202ENST00000442956 ZNF214Q9UL59 606 aaPredicted RBP16.4■□□□□ 0.22
LINC00299-202ENST00000442956 RIPK3Q9Y572 518 aa16.4■□□□□ 0.22
LINC00299-202ENST00000442956 OAZ1P54368 228 aa16.39■□□□□ 0.21
LINC00299-202ENST00000442956 RPS6P62753 249 aaKnown RBP16.39■□□□□ 0.21
LINC00299-202ENST00000442956 CT47A1Q5JQC4 288 aaPredicted RBP16.39■□□□□ 0.21
LINC00299-202ENST00000442956 SNRNP48Q6IEG0 339 aaKnown RBP16.39■□□□□ 0.21
LINC00299-202ENST00000442956 KLHL10Q6JEL2 608 aa16.39■□□□□ 0.21
LINC00299-202ENST00000442956 SV2BQ7L1I2 683 aa16.39■□□□□ 0.21
LINC00299-202ENST00000442956 KCNK18Q7Z418 384 aa16.39■□□□□ 0.21
LINC00299-202ENST00000442956 TRMT44Q8IYL2 757 aaKnown RBP16.39■□□□□ 0.21
LINC00299-202ENST00000442956 ENOX1Q8TC92 643 aaKnown RBP16.39■□□□□ 0.21
LINC00299-202ENST00000442956 LARP4BQ92615 738 aaKnown RBP16.39■□□□□ 0.21
LINC00299-202ENST00000442956 OTUD5Q96G74 571 aa16.39■□□□□ 0.21
LINC00299-202ENST00000442956 ZFP91Q96JP5 570 aaPredicted RBP16.39■□□□□ 0.21
LINC00299-202ENST00000442956 C7orf25Q9BPX7 421 aa16.39■□□□□ 0.21
LINC00299-202ENST00000442956 RNF146Q9NTX7 359 aa16.39■□□□□ 0.21
LINC00299-202ENST00000442956 HOXC10Q9NYD6 342 aa16.39■□□□□ 0.21
LINC00299-202ENST00000442956 MAP3K20Q9NYL2 800 aaKnown RBP16.39■□□□□ 0.21
LINC00299-202ENST00000442956 KDM3AQ9Y4C1 1321 aa16.39■□□□□ 0.21
LINC00299-202ENST00000442956 PPP1R3GB7ZBB8 358 aa16.39■□□□□ 0.21
LINC00299-202ENST00000442956 IRF6O14896 467 aa16.39■□□□□ 0.21
LINC00299-202ENST00000442956 KLRC4O43908 158 aa16.39■□□□□ 0.21
LINC00299-202ENST00000442956 MCM6Q14566 821 aa16.39■□□□□ 0.21
LINC00299-202ENST00000442956 KCNB1Q14721 858 aa16.39■□□□□ 0.21
LINC00299-202ENST00000442956 TMEM132BQ14DG7 1078 aa16.39■□□□□ 0.21
LINC00299-202ENST00000442956 HYIQ5T013 277 aa16.39■□□□□ 0.21
LINC00299-202ENST00000442956 TREML2Q5T2D2 321 aa16.39■□□□□ 0.21
LINC00299-202ENST00000442956 ZNF658Q5TYW1 1059 aaPredicted RBP16.39■□□□□ 0.21
LINC00299-202ENST00000442956 NCAPH2Q6IBW4 605 aa16.39■□□□□ 0.21
LINC00299-202ENST00000442956 ERO1BQ86YB8 467 aa16.39■□□□□ 0.21
LINC00299-202ENST00000442956 RAD54LQ92698 747 aa16.39■□□□□ 0.21
LINC00299-202ENST00000442956 MED15Q96RN5 788 aa16.39■□□□□ 0.21
LINC00299-202ENST00000442956 FANCLQ9NW38 375 aa16.39■□□□□ 0.21
LINC00299-202ENST00000442956 VAV3Q9UKW4 847 aa16.39■□□□□ 0.21
LINC00299-202ENST00000442956 RABGAP1Q9Y3P9 1069 aa16.39■□□□□ 0.21
LINC00299-202ENST00000442956 RPTORQ8N122 1335 aa16.38■□□□□ 0.21
LINC00299-202ENST00000442956 SPDYE16A6NNV3 312 aaPredicted RBP16.38■□□□□ 0.21
LINC00299-202ENST00000442956 PPATQ06203 517 aa16.38■□□□□ 0.21
LINC00299-202ENST00000442956 KMT5BQ4FZB7 885 aa16.38■□□□□ 0.21
LINC00299-202ENST00000442956 SLC30A10Q6XR72 485 aa16.38■□□□□ 0.21
LINC00299-202ENST00000442956 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.38■□□□□ 0.21
LINC00299-202ENST00000442956 SAMD3Q8N6K7 520 aa16.38■□□□□ 0.21
LINC00299-202ENST00000442956 MRFAP1L1Q96HT8 127 aa16.38■□□□□ 0.21
LINC00299-202ENST00000442956 NT5C3AQ9H0P0 336 aa16.38■□□□□ 0.21
LINC00299-202ENST00000442956 NFE2L3Q9Y4A8 694 aa16.38■□□□□ 0.21
LINC00299-202ENST00000442956 MEIS1O00470 390 aa16.37■□□□□ 0.21
LINC00299-202ENST00000442956 ATP1A3P13637 1013 aa16.37■□□□□ 0.21
LINC00299-202ENST00000442956 ASIC1P78348 528 aa16.37■□□□□ 0.21
LINC00299-202ENST00000442956 HAUS3Q68CZ6 603 aa16.37■□□□□ 0.21
LINC00299-202ENST00000442956 NSMFQ6X4W1 530 aa16.37■□□□□ 0.21
LINC00299-202ENST00000442956 RNF207Q6ZRF8 634 aa16.37■□□□□ 0.21
LINC00299-202ENST00000442956 DRC7Q8IY82 874 aa16.37■□□□□ 0.21
LINC00299-202ENST00000442956 IL31RAQ8NI17 732 aa16.37■□□□□ 0.21
LINC00299-202ENST00000442956 TEX13BQ9BXU2 312 aa16.37■□□□□ 0.21
LINC00299-202ENST00000442956 KIAA1024Q9UPX6 916 aa16.37■□□□□ 0.21
LINC00299-202ENST00000442956 GDAQ9Y2T3 454 aa16.37■□□□□ 0.21
LINC00299-202ENST00000442956 MYPNQ86TC9 1320 aa16.37■□□□□ 0.21
LINC00299-202ENST00000442956 POTEB3A0JP26 581 aa16.37■□□□□ 0.21
LINC00299-202ENST00000442956 SPDYE5A6NIY4 337 aa16.37■□□□□ 0.21
LINC00299-202ENST00000442956 SLC26A4O43511 780 aa16.37■□□□□ 0.21
LINC00299-202ENST00000442956 POTEBQ6S5H4 581 aa16.37■□□□□ 0.21
LINC00299-202ENST00000442956 ERMNQ8TAM6 284 aa16.37■□□□□ 0.21
LINC00299-202ENST00000442956 CLEC11AQ9Y240 323 aa16.37■□□□□ 0.21
LINC00299-202ENST00000442956 MYMKA6NI61 221 aa16.36■□□□□ 0.21
LINC00299-202ENST00000442956 ATP2A1O14983 1001 aa16.36■□□□□ 0.21
LINC00299-202ENST00000442956 MED24O75448 989 aa16.36■□□□□ 0.21
LINC00299-202ENST00000442956 RHOBTB3O94955 611 aa16.36■□□□□ 0.21
LINC00299-202ENST00000442956 CDC25BP30305 580 aa16.36■□□□□ 0.21
LINC00299-202ENST00000442956 SETQ01105 290 aaPredicted RBP16.36■□□□□ 0.21
LINC00299-202ENST00000442956 SEMA3FQ13275 785 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms