RNA–Protein interactions for RNA: ENST00000442387.2

GACAT3-202, gastric cancer associated transcript 3, humanhuman

TSL 3

Gene GACAT3, Length 472 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-202ENST00000442387 IWS1Q96ST2 819 aa12.84□□□□□ -0.35
GACAT3-202ENST00000442387 RMDN3Q96TC7 470 aa12.84□□□□□ -0.35
GACAT3-202ENST00000442387 ZBED2Q9BTP6 218 aa12.84□□□□□ -0.35
GACAT3-202ENST00000442387 KAT14Q9H8E8 782 aa12.84□□□□□ -0.35
GACAT3-202ENST00000442387 COL20A1Q9P218 1284 aa12.84□□□□□ -0.35
GACAT3-202ENST00000442387 SCN10AQ9Y5Y9 1956 aa12.83□□□□□ -0.35
GACAT3-202ENST00000442387 TANC1Q9C0D5 1861 aa12.83□□□□□ -0.36
GACAT3-202ENST00000442387 LCHNA4D1U4 455 aa12.83□□□□□ -0.36
GACAT3-202ENST00000442387 LPXNO60711 386 aa12.83□□□□□ -0.36
GACAT3-202ENST00000442387 PLA2G5P39877 138 aa12.83□□□□□ -0.36
GACAT3-202ENST00000442387 RRP1P56182 461 aaKnown RBP12.83□□□□□ -0.36
GACAT3-202ENST00000442387 DEFB103AP81534 67 aa12.83□□□□□ -0.36
GACAT3-202ENST00000442387 RBL2Q08999 1139 aa12.83□□□□□ -0.36
GACAT3-202ENST00000442387 HDAC1Q13547 482 aaPredicted RBP12.83□□□□□ -0.36
GACAT3-202ENST00000442387 GPNMBQ14956 572 aa12.83□□□□□ -0.36
GACAT3-202ENST00000442387 ASPRV1Q53RT3 343 aa12.83□□□□□ -0.36
GACAT3-202ENST00000442387 ARHGEF16Q5VV41 709 aa12.83□□□□□ -0.36
GACAT3-202ENST00000442387 SPRED2Q7Z698 418 aa12.83□□□□□ -0.36
GACAT3-202ENST00000442387 TMCO2Q7Z6W1 182 aaPredicted RBP12.83□□□□□ -0.36
GACAT3-202ENST00000442387 ADGRF4Q8IZF3 695 aa12.83□□□□□ -0.36
GACAT3-202ENST00000442387 C7orf31Q8N865 590 aa12.83□□□□□ -0.36
GACAT3-202ENST00000442387 DHX38Q92620 1227 aaKnown RBP12.83□□□□□ -0.36
GACAT3-202ENST00000442387 FAM122AQ96E09 287 aa12.83□□□□□ -0.36
GACAT3-202ENST00000442387 KATNAL1Q9BW62 490 aa12.83□□□□□ -0.36
GACAT3-202ENST00000442387 GTF2IRD1Q9UHL9 959 aa12.83□□□□□ -0.36
GACAT3-202ENST00000442387 MRPL11Q9Y3B7 192 aaKnown RBP12.83□□□□□ -0.36
GACAT3-202ENST00000442387 DHX16O60231 1041 aaKnown RBP12.82□□□□□ -0.36
GACAT3-202ENST00000442387 NBNO60934 754 aa12.82□□□□□ -0.36
GACAT3-202ENST00000442387 KDM4AO75164 1064 aa12.82□□□□□ -0.36
GACAT3-202ENST00000442387 EIF3JO75822 258 aaKnown RBP12.82□□□□□ -0.36
GACAT3-202ENST00000442387 CXCL10P02778 98 aa12.82□□□□□ -0.36
GACAT3-202ENST00000442387 CKBP12277 381 aa12.82□□□□□ -0.36
GACAT3-202ENST00000442387 EIF2AK2P19525 551 aaKnown RBP12.82□□□□□ -0.36
GACAT3-202ENST00000442387 PSEN2P49810 448 aa12.82□□□□□ -0.36
GACAT3-202ENST00000442387 QRICH1Q2TAL8 776 aa12.82□□□□□ -0.36
GACAT3-202ENST00000442387 FBXO11Q86XK2 927 aa12.82□□□□□ -0.36
GACAT3-202ENST00000442387 GDPD5Q8WTR4 605 aa12.82□□□□□ -0.36
GACAT3-202ENST00000442387 ANKS1AQ92625 1134 aa12.82□□□□□ -0.36
GACAT3-202ENST00000442387 EMID1Q96A84 441 aaPredicted RBP12.82□□□□□ -0.36
GACAT3-202ENST00000442387 CRBNQ96SW2 442 aa12.82□□□□□ -0.36
GACAT3-202ENST00000442387 ALG1Q9BT22 464 aa12.82□□□□□ -0.36
GACAT3-202ENST00000442387 LMCD1Q9NZU5 365 aa12.82□□□□□ -0.36
GACAT3-202ENST00000442387 HDAC6Q9UBN7 1215 aa12.82□□□□□ -0.36
GACAT3-202ENST00000442387 DDX41Q9UJV9 622 aaKnown RBP12.82□□□□□ -0.36
GACAT3-202ENST00000442387 MRVI1Q9Y6F6 885 aa12.82□□□□□ -0.36
GACAT3-202ENST00000442387 SCN5AQ14524 2016 aa12.81□□□□□ -0.36
GACAT3-202ENST00000442387 ABHD14A-ACY1A0A1B0GW23 586 aa12.81□□□□□ -0.36
GACAT3-202ENST00000442387 EFCAB14O75071 495 aa12.81□□□□□ -0.36
GACAT3-202ENST00000442387 GJB5O95377 273 aa12.81□□□□□ -0.36
GACAT3-202ENST00000442387 F2P00734 622 aa12.81□□□□□ -0.36
GACAT3-202ENST00000442387 PARP1P09874 1014 aaKnown RBP12.81□□□□□ -0.36
GACAT3-202ENST00000442387 SDSP20132 328 aa12.81□□□□□ -0.36
GACAT3-202ENST00000442387 PTK7Q13308 1070 aa12.81□□□□□ -0.36
GACAT3-202ENST00000442387 LAMC2Q13753 1193 aa12.81□□□□□ -0.36
GACAT3-202ENST00000442387 MFSD10Q14728 455 aa12.81□□□□□ -0.36
GACAT3-202ENST00000442387 PPTC7Q8NI37 304 aa12.81□□□□□ -0.36
GACAT3-202ENST00000442387 ZSCAN10Q96SZ4 725 aaPredicted RBP12.81□□□□□ -0.36
GACAT3-202ENST00000442387 RAD9AQ99638 391 aa12.81□□□□□ -0.36
GACAT3-202ENST00000442387 LNPKQ9C0E8 428 aa12.81□□□□□ -0.36
GACAT3-202ENST00000442387 JMJD4Q9H9V9 463 aa12.81□□□□□ -0.36
GACAT3-202ENST00000442387 VAT1LQ9HCJ6 419 aa12.81□□□□□ -0.36
GACAT3-202ENST00000442387 MTUS1Q9ULD2 1270 aa12.81□□□□□ -0.36
GACAT3-202ENST00000442387 BDP1A6H8Y1 2624 aa12.81□□□□□ -0.36
GACAT3-202ENST00000442387 B4E1Z4 1266 aa12.8□□□□□ -0.36
GACAT3-202ENST00000442387 CFBP00751 764 aa12.8□□□□□ -0.36
GACAT3-202ENST00000442387 NR3C2P08235 984 aa12.8□□□□□ -0.36
GACAT3-202ENST00000442387 ZNF286BP0CG31 522 aa12.8□□□□□ -0.36
GACAT3-202ENST00000442387 IKBKEQ14164 716 aa12.8□□□□□ -0.36
GACAT3-202ENST00000442387 KIAA0753Q2KHM9 967 aa12.8□□□□□ -0.36
GACAT3-202ENST00000442387 TCTN1Q2MV58 587 aa12.8□□□□□ -0.36
GACAT3-202ENST00000442387 DHX37Q8IY37 1157 aaKnown RBP12.8□□□□□ -0.36
GACAT3-202ENST00000442387 ENAHQ8N8S7 591 aaPredicted RBP12.8□□□□□ -0.36
GACAT3-202ENST00000442387 TGS1Q96RS0 853 aaKnown RBP12.8□□□□□ -0.36
GACAT3-202ENST00000442387 EPHX3Q9H6B9 360 aa12.8□□□□□ -0.36
GACAT3-202ENST00000442387 PXMP2Q9NR77 195 aa12.8□□□□□ -0.36
GACAT3-202ENST00000442387 LINC01553A4QN01 128 aa12.79□□□□□ -0.36
GACAT3-202ENST00000442387 HAS3O00219 553 aa12.79□□□□□ -0.36
GACAT3-202ENST00000442387 HSD17B4P51659 736 aa12.79□□□□□ -0.36
GACAT3-202ENST00000442387 ERVK-21P61565 698 aa12.79□□□□□ -0.36
GACAT3-202ENST00000442387 IMMTQ16891 758 aaKnown RBP12.79□□□□□ -0.36
GACAT3-202ENST00000442387 TRIM71Q2Q1W2 868 aaKnown RBP12.79□□□□□ -0.36
GACAT3-202ENST00000442387 ZNF618Q5T7W0 954 aa12.79□□□□□ -0.36
GACAT3-202ENST00000442387 CWC27Q6UX04 472 aaKnown RBP12.79□□□□□ -0.36
GACAT3-202ENST00000442387 LRFN3Q9BTN0 628 aa12.79□□□□□ -0.36
GACAT3-202ENST00000442387 AMNQ9BXJ7 453 aa12.79□□□□□ -0.36
GACAT3-202ENST00000442387 SUGCTQ9HAC7 445 aa12.79□□□□□ -0.36
GACAT3-202ENST00000442387 PPFIA4O75335 1185 aa12.78□□□□□ -0.36
GACAT3-202ENST00000442387 LGR5O75473 907 aa12.78□□□□□ -0.36
GACAT3-202ENST00000442387 MYCLP12524 364 aaPredicted RBP12.78□□□□□ -0.36
GACAT3-202ENST00000442387 HOXD8P13378 290 aaPredicted RBP12.78□□□□□ -0.36
GACAT3-202ENST00000442387 ZNF200P98182 395 aaPredicted RBP12.78□□□□□ -0.36
GACAT3-202ENST00000442387 TMEM31Q5JXX7 168 aa12.78□□□□□ -0.36
GACAT3-202ENST00000442387 FAM117BQ6P1L5 589 aa12.78□□□□□ -0.36
GACAT3-202ENST00000442387 KCNV1Q6PIU1 500 aa12.78□□□□□ -0.36
GACAT3-202ENST00000442387 TRAF7Q6Q0C0 670 aa12.78□□□□□ -0.36
GACAT3-202ENST00000442387 WNT8BQ93098 351 aa12.78□□□□□ -0.36
GACAT3-202ENST00000442387 SPATA33Q96N06 139 aa12.78□□□□□ -0.36
GACAT3-202ENST00000442387 PDCD2LQ9BRP1 358 aa12.78□□□□□ -0.36
GACAT3-202ENST00000442387 UBAC1Q9BSL1 405 aa12.78□□□□□ -0.36
GACAT3-202ENST00000442387 KRT23Q9C075 422 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms