RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 CCDC148Q8NFR7 591 aa17.26■□□□□ 0.35
CSNK1E-210ENST00000442216 LENG1Q96BZ8 264 aaPredicted RBP17.26■□□□□ 0.35
CSNK1E-210ENST00000442216 BACH2Q9BYV9 841 aa17.26■□□□□ 0.35
CSNK1E-210ENST00000442216 EHMT1Q9H9B1 1298 aa17.26■□□□□ 0.35
CSNK1E-210ENST00000442216 PHF24Q9UPV7 400 aa17.26■□□□□ 0.35
CSNK1E-210ENST00000442216 PDE4DIPQ5VU43 2346 aa17.26■□□□□ 0.35
CSNK1E-210ENST00000442216 STK36Q9NRP7 1315 aa17.25■□□□□ 0.35
CSNK1E-210ENST00000442216 MOXD2PA6NHM9 499 aa17.25■□□□□ 0.35
CSNK1E-210ENST00000442216 C6orf222P0C671 652 aaPredicted RBP17.25■□□□□ 0.35
CSNK1E-210ENST00000442216 TGFB3P10600 412 aa17.25■□□□□ 0.35
CSNK1E-210ENST00000442216 MYCLP12524 364 aaPredicted RBP17.25■□□□□ 0.35
CSNK1E-210ENST00000442216 GNA11P29992 359 aa17.25■□□□□ 0.35
CSNK1E-210ENST00000442216 AP3B2Q13367 1082 aa17.25■□□□□ 0.35
CSNK1E-210ENST00000442216 PCNX4Q63HM2 1172 aa17.25■□□□□ 0.35
CSNK1E-210ENST00000442216 CCSAPQ6IQ19 270 aaPredicted RBP17.25■□□□□ 0.35
CSNK1E-210ENST00000442216 CCDC62Q6P9F0 684 aa17.25■□□□□ 0.35
CSNK1E-210ENST00000442216 GTF3C6Q969F1 213 aa17.25■□□□□ 0.35
CSNK1E-210ENST00000442216 TBC1D32Q96NH3 1257 aa17.25■□□□□ 0.35
CSNK1E-210ENST00000442216 AP5M1Q9H0R1 490 aa17.25■□□□□ 0.35
CSNK1E-210ENST00000442216 C6orf50Q9HD87 102 aa17.25■□□□□ 0.35
CSNK1E-210ENST00000442216 LIMCH1Q9UPQ0 1083 aa17.25■□□□□ 0.35
CSNK1E-210ENST00000442216 TXNP10599 105 aaKnown RBP17.24■□□□□ 0.35
CSNK1E-210ENST00000442216 CLK2P49760 499 aaKnown RBP17.24■□□□□ 0.35
CSNK1E-210ENST00000442216 UBE2SQ16763 222 aa17.24■□□□□ 0.35
CSNK1E-210ENST00000442216 SEPT14Q6ZU15 432 aa17.24■□□□□ 0.35
CSNK1E-210ENST00000442216 IL31RAQ8NI17 732 aa17.24■□□□□ 0.35
CSNK1E-210ENST00000442216 BICD2Q8TD16 824 aa17.24■□□□□ 0.35
CSNK1E-210ENST00000442216 ZSCAN31Q96LW9 406 aaPredicted RBP17.24■□□□□ 0.35
CSNK1E-210ENST00000442216 PCDHA6Q9UN73 950 aa17.24■□□□□ 0.35
CSNK1E-210ENST00000442216 PCDHA8Q9Y5H6 950 aa17.24■□□□□ 0.35
CSNK1E-210ENST00000442216 CTAGE5O15320 804 aa17.23■□□□□ 0.35
CSNK1E-210ENST00000442216 DYNC1LI2O43237 492 aaPredicted RBP17.23■□□□□ 0.35
CSNK1E-210ENST00000442216 ZEB2O60315 1214 aa17.23■□□□□ 0.35
CSNK1E-210ENST00000442216 RGS20O76081 388 aa17.23■□□□□ 0.35
CSNK1E-210ENST00000442216 MRPS9P82933 396 aaKnown RBP17.23■□□□□ 0.35
CSNK1E-210ENST00000442216 KCNA10Q16322 511 aa17.23■□□□□ 0.35
CSNK1E-210ENST00000442216 GNPTABQ3T906 1256 aa17.23■□□□□ 0.35
CSNK1E-210ENST00000442216 GNASQ5JWF2 1037 aa17.23■□□□□ 0.35
CSNK1E-210ENST00000442216 INPP4AQ96PE3 977 aaPredicted RBP17.23■□□□□ 0.35
CSNK1E-210ENST00000442216 SENP6Q9GZR1 1112 aaPredicted RBP17.23■□□□□ 0.35
CSNK1E-210ENST00000442216 DDX41Q9UJV9 622 aaKnown RBP17.23■□□□□ 0.35
CSNK1E-210ENST00000442216 ST18O60284 1047 aa17.22■□□□□ 0.35
CSNK1E-210ENST00000442216 ARIH2O95376 493 aa17.22■□□□□ 0.35
CSNK1E-210ENST00000442216 LARGE1O95461 756 aa17.22■□□□□ 0.35
CSNK1E-210ENST00000442216 MYCNP04198 464 aaPredicted RBP17.22■□□□□ 0.35
CSNK1E-210ENST00000442216 ICAM3P32942 547 aa17.22■□□□□ 0.35
CSNK1E-210ENST00000442216 ACLYP53396 1101 aa17.22■□□□□ 0.35
CSNK1E-210ENST00000442216 FSCN1Q16658 493 aaKnown RBP17.22■□□□□ 0.35
CSNK1E-210ENST00000442216 BRDTQ58F21 947 aaPredicted RBP17.22■□□□□ 0.35
CSNK1E-210ENST00000442216 C1orf53Q5VUE5 145 aa17.22■□□□□ 0.35
CSNK1E-210ENST00000442216 GALNT17Q6IS24 598 aa17.22■□□□□ 0.35
CSNK1E-210ENST00000442216 WASF1Q92558 559 aa17.22■□□□□ 0.35
CSNK1E-210ENST00000442216 SH2B1Q9NRF2 756 aaPredicted RBP17.22■□□□□ 0.35
CSNK1E-210ENST00000442216 MRVI1Q9Y6F6 885 aa17.22■□□□□ 0.35
CSNK1E-210ENST00000442216 DOCK5Q9H7D0 1870 aa17.21■□□□□ 0.35
CSNK1E-210ENST00000442216 MYADML2A6NDP7 307 aa17.21■□□□□ 0.35
CSNK1E-210ENST00000442216 PPFIA3O75145 1194 aa17.21■□□□□ 0.35
CSNK1E-210ENST00000442216 CABYRO75952 493 aa17.21■□□□□ 0.35
CSNK1E-210ENST00000442216 CTDNEP1O95476 244 aa17.21■□□□□ 0.35
CSNK1E-210ENST00000442216 GH1P01241 217 aa17.21■□□□□ 0.35
CSNK1E-210ENST00000442216 ASGR1P07306 291 aa17.21■□□□□ 0.35
CSNK1E-210ENST00000442216 XBP1P17861 261 aa17.21■□□□□ 0.35
CSNK1E-210ENST00000442216 CPT1AP50416 773 aa17.21■□□□□ 0.35
CSNK1E-210ENST00000442216 SNX17Q15036 470 aa17.21■□□□□ 0.35
CSNK1E-210ENST00000442216 TMEM63BQ5T3F8 832 aa17.21■□□□□ 0.35
CSNK1E-210ENST00000442216 NLRX1Q86UT6 975 aa17.21■□□□□ 0.35
CSNK1E-210ENST00000442216 REXO1Q8N1G1 1221 aaKnown RBP17.21■□□□□ 0.35
CSNK1E-210ENST00000442216 OR6J1Q8NGC5 347 aa17.21■□□□□ 0.35
CSNK1E-210ENST00000442216 DPF3Q92784 378 aa17.21■□□□□ 0.35
CSNK1E-210ENST00000442216 EMID1Q96A84 441 aaPredicted RBP17.21■□□□□ 0.35
CSNK1E-210ENST00000442216 ANO3Q9BYT9 981 aa17.21■□□□□ 0.35
CSNK1E-210ENST00000442216 VPS54Q9P1Q0 977 aa17.21■□□□□ 0.35
CSNK1E-210ENST00000442216 ELP1O95163 1332 aa17.21■□□□□ 0.34
CSNK1E-210ENST00000442216 A0A1W2PQ45 241 aaPredicted RBP17.2■□□□□ 0.34
CSNK1E-210ENST00000442216 A0A1W2PQY0 241 aa17.2■□□□□ 0.34
CSNK1E-210ENST00000442216 A6NJR5 290 aa17.2■□□□□ 0.34
CSNK1E-210ENST00000442216 MAFGO15525 162 aa17.2■□□□□ 0.34
CSNK1E-210ENST00000442216 FIBPO43427 364 aa17.2■□□□□ 0.34
CSNK1E-210ENST00000442216 LY6KQ17RY6 165 aa17.2■□□□□ 0.34
CSNK1E-210ENST00000442216 SLC39A5Q6ZMH5 540 aa17.2■□□□□ 0.34
CSNK1E-210ENST00000442216 NECAB1Q8N987 351 aa17.2■□□□□ 0.34
CSNK1E-210ENST00000442216 NSUN7Q8NE18 718 aaKnown RBP17.2■□□□□ 0.34
CSNK1E-210ENST00000442216 GPRASP2Q96D09 838 aa17.2■□□□□ 0.34
CSNK1E-210ENST00000442216 CDHR1Q96JP9 859 aa17.2■□□□□ 0.34
CSNK1E-210ENST00000442216 GLT1D1Q96MS3 346 aa17.2■□□□□ 0.34
CSNK1E-210ENST00000442216 SEZ6LQ9BYH1 1024 aa17.2■□□□□ 0.34
CSNK1E-210ENST00000442216 POLR3EQ9NVU0 708 aa17.2■□□□□ 0.34
CSNK1E-210ENST00000442216 ORC3Q9UBD5 711 aaPredicted RBP17.2■□□□□ 0.34
CSNK1E-210ENST00000442216 TNRC18O15417 2968 aaPredicted RBP17.2■□□□□ 0.34
CSNK1E-210ENST00000442216 SCN10AQ9Y5Y9 1956 aa17.19■□□□□ 0.34
CSNK1E-210ENST00000442216 SPATA31C2B4DYI2 1134 aa17.19■□□□□ 0.34
CSNK1E-210ENST00000442216 EVI5O60447 810 aa17.19■□□□□ 0.34
CSNK1E-210ENST00000442216 KPNA6O60684 536 aa17.19■□□□□ 0.34
CSNK1E-210ENST00000442216 SREBF1P36956 1147 aa17.19■□□□□ 0.34
CSNK1E-210ENST00000442216 NLRP5P59047 1200 aa17.19■□□□□ 0.34
CSNK1E-210ENST00000442216 BEX3Q00994 111 aa17.19■□□□□ 0.34
CSNK1E-210ENST00000442216 LAMC2Q13753 1193 aa17.19■□□□□ 0.34
CSNK1E-210ENST00000442216 DAGLBQ8NCG7 672 aa17.19■□□□□ 0.34
CSNK1E-210ENST00000442216 COPS5Q92905 334 aa17.19■□□□□ 0.34
CSNK1E-210ENST00000442216 SENP7Q9BQF6 1050 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms