RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 C16orf59Q7L2K0 433 aa21.88■■□□□ 1.09
HMGB3P22-201ENST00000442010 CMTR1Q8N1G2 835 aaKnown RBP21.88■■□□□ 1.09
HMGB3P22-201ENST00000442010 EMID1Q96A84 441 aaPredicted RBP21.88■■□□□ 1.09
HMGB3P22-201ENST00000442010 RRP36Q96EU6 259 aaKnown RBP21.88■■□□□ 1.09
HMGB3P22-201ENST00000442010 PPP1R12CQ9BZL4 782 aa21.88■■□□□ 1.09
HMGB3P22-201ENST00000442010 SLC12A7Q9Y666 1083 aa21.88■■□□□ 1.09
HMGB3P22-201ENST00000442010 SCN5AQ14524 2016 aa21.87■■□□□ 1.09
HMGB3P22-201ENST00000442010 MMP3P08254 477 aa21.87■■□□□ 1.09
HMGB3P22-201ENST00000442010 DHX32Q7L7V1 743 aaKnown RBP21.87■■□□□ 1.09
HMGB3P22-201ENST00000442010 RAB11FIP4Q86YS3 637 aa21.87■■□□□ 1.09
HMGB3P22-201ENST00000442010 DEFB123Q8N688 67 aa21.87■■□□□ 1.09
HMGB3P22-201ENST00000442010 FANCBQ8NB91 859 aa21.87■■□□□ 1.09
HMGB3P22-201ENST00000442010 AFG1LQ8WV93 481 aa21.87■■□□□ 1.09
HMGB3P22-201ENST00000442010 NOC4LQ9BVI4 516 aaKnown RBP21.87■■□□□ 1.09
HMGB3P22-201ENST00000442010 UMODL1Q5DID0 1318 aa21.86■■□□□ 1.09
HMGB3P22-201ENST00000442010 MYCLP12524 364 aaPredicted RBP21.86■■□□□ 1.09
HMGB3P22-201ENST00000442010 CSF2RAP15509 400 aa21.86■■□□□ 1.09
HMGB3P22-201ENST00000442010 CYP2C18P33260 490 aa21.86■■□□□ 1.09
HMGB3P22-201ENST00000442010 NBPF20Q3BBV1 942 aa21.86■■□□□ 1.09
HMGB3P22-201ENST00000442010 FAM109BQ6ICB4 259 aaPredicted RBP21.86■■□□□ 1.09
HMGB3P22-201ENST00000442010 NFRKBQ6P4R8 1299 aa21.86■■□□□ 1.09
HMGB3P22-201ENST00000442010 TMTC3Q6ZXV5 915 aa21.86■■□□□ 1.09
HMGB3P22-201ENST00000442010 FCHSD1Q86WN1 690 aa21.86■■□□□ 1.09
HMGB3P22-201ENST00000442010 TCEANC2Q96MN5 208 aa21.86■■□□□ 1.09
HMGB3P22-201ENST00000442010 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.86■■□□□ 1.09
HMGB3P22-201ENST00000442010 TRMT13Q9NUP7 481 aaKnown RBP21.86■■□□□ 1.09
HMGB3P22-201ENST00000442010 COL6A3P12111 3177 aa21.86■■□□□ 1.09
HMGB3P22-201ENST00000442010 PIK3CDO00329 1044 aa21.85■■□□□ 1.09
HMGB3P22-201ENST00000442010 MEIS2O14770 477 aa21.85■■□□□ 1.09
HMGB3P22-201ENST00000442010 PPIGQ13427 754 aaKnown RBP eCLIP21.85■■□□□ 1.09
HMGB3P22-201ENST00000442010 TMEM240Q5SV17 173 aa21.85■■□□□ 1.09
HMGB3P22-201ENST00000442010 APOA5Q6Q788 366 aa21.85■■□□□ 1.09
HMGB3P22-201ENST00000442010 TMEM199Q8N511 208 aa21.85■■□□□ 1.09
HMGB3P22-201ENST00000442010 KAT2BQ92831 832 aa21.85■■□□□ 1.09
HMGB3P22-201ENST00000442010 HIPK3Q9H422 1215 aa21.85■■□□□ 1.09
HMGB3P22-201ENST00000442010 MTMR10Q9NXD2 777 aa21.85■■□□□ 1.09
HMGB3P22-201ENST00000442010 BRPF3Q9ULD4 1205 aa21.85■■□□□ 1.09
HMGB3P22-201ENST00000442010 MRVI1Q9Y6F6 885 aa21.85■■□□□ 1.09
HMGB3P22-201ENST00000442010 TANC1Q9C0D5 1861 aa21.84■■□□□ 1.09
HMGB3P22-201ENST00000442010 CCND2P30279 289 aa21.84■■□□□ 1.09
HMGB3P22-201ENST00000442010 HSPA4P34932 840 aa21.84■■□□□ 1.09
HMGB3P22-201ENST00000442010 MRPS9P82933 396 aaKnown RBP21.84■■□□□ 1.09
HMGB3P22-201ENST00000442010 SMAD3P84022 425 aaKnown RBP21.84■■□□□ 1.09
HMGB3P22-201ENST00000442010 KRT32Q14532 448 aa21.84■■□□□ 1.09
HMGB3P22-201ENST00000442010 RASIP1Q5U651 963 aa21.84■■□□□ 1.09
HMGB3P22-201ENST00000442010 MICU3Q86XE3 530 aa21.84■■□□□ 1.09
HMGB3P22-201ENST00000442010 RNPC3Q96LT9 517 aaKnown RBP21.84■■□□□ 1.09
HMGB3P22-201ENST00000442010 WNT8AQ9H1J5 351 aa21.84■■□□□ 1.09
HMGB3P22-201ENST00000442010 SEC63Q9UGP8 760 aaKnown RBP21.84■■□□□ 1.09
HMGB3P22-201ENST00000442010 HOXD8P13378 290 aaPredicted RBP21.83■■□□□ 1.09
HMGB3P22-201ENST00000442010 SP2Q02086 613 aa21.83■■□□□ 1.09
HMGB3P22-201ENST00000442010 PTPN11Q06124 597 aaPredicted RBP21.83■■□□□ 1.09
HMGB3P22-201ENST00000442010 LAMC2Q13753 1193 aa21.83■■□□□ 1.09
HMGB3P22-201ENST00000442010 MYSM1Q5VVJ2 828 aa21.83■■□□□ 1.09
HMGB3P22-201ENST00000442010 KCNV1Q6PIU1 500 aa21.83■■□□□ 1.09
HMGB3P22-201ENST00000442010 USP17L6PQ6QN14 398 aa21.83■■□□□ 1.09
HMGB3P22-201ENST00000442010 PPP1R13LQ8WUF5 828 aa21.83■■□□□ 1.09
HMGB3P22-201ENST00000442010 GPKOWQ92917 476 aaPredicted RBP eCLIP21.83■■□□□ 1.09
HMGB3P22-201ENST00000442010 VWCEQ96DN2 955 aa21.83■■□□□ 1.09
HMGB3P22-201ENST00000442010 ZFP91Q96JP5 570 aaPredicted RBP21.83■■□□□ 1.09
HMGB3P22-201ENST00000442010 TET1Q8NFU7 2136 aa21.83■■□□□ 1.08
HMGB3P22-201ENST00000442010 GBF1Q92538 1859 aa21.83■■□□□ 1.08
HMGB3P22-201ENST00000442010 CDH23Q9H251 3354 aa21.82■■□□□ 1.08
HMGB3P22-201ENST00000442010 SUPT20HL2P0C7V6 817 aa21.82■■□□□ 1.08
HMGB3P22-201ENST00000442010 ACRP10323 421 aa21.82■■□□□ 1.08
HMGB3P22-201ENST00000442010 TGFB3P10600 412 aa21.82■■□□□ 1.08
HMGB3P22-201ENST00000442010 FUT2Q10981 343 aa21.82■■□□□ 1.08
HMGB3P22-201ENST00000442010 PPTC7Q8NI37 304 aa21.82■■□□□ 1.08
HMGB3P22-201ENST00000442010 IL23AQ9NPF7 189 aa21.82■■□□□ 1.08
HMGB3P22-201ENST00000442010 CNTNAP5Q8WYK1 1306 aa21.81■■□□□ 1.08
HMGB3P22-201ENST00000442010 hCG_1642624A0A1W2PR95 340 aa21.81■■□□□ 1.08
HMGB3P22-201ENST00000442010 HMGB1P09429 215 aaKnown RBP21.81■■□□□ 1.08
HMGB3P22-201ENST00000442010 CYP2C9P11712 490 aa21.81■■□□□ 1.08
HMGB3P22-201ENST00000442010 CASTP20810 708 aaKnown RBP21.81■■□□□ 1.08
HMGB3P22-201ENST00000442010 UBA1P22314 1058 aaKnown RBP21.81■■□□□ 1.08
HMGB3P22-201ENST00000442010 ICAM3P32942 547 aa21.81■■□□□ 1.08
HMGB3P22-201ENST00000442010 DGKDQ16760 1214 aa21.81■■□□□ 1.08
HMGB3P22-201ENST00000442010 CELF3Q5SZQ8 465 aaKnown RBP21.81■■□□□ 1.08
HMGB3P22-201ENST00000442010 ZNF365Q70YC5 407 aa21.81■■□□□ 1.08
HMGB3P22-201ENST00000442010 SESTD1Q86VW0 696 aa21.81■■□□□ 1.08
HMGB3P22-201ENST00000442010 DHX37Q8IY37 1157 aaKnown RBP21.81■■□□□ 1.08
HMGB3P22-201ENST00000442010 CCDC82Q8N4S0 544 aa21.81■■□□□ 1.08
HMGB3P22-201ENST00000442010 INPP4AQ96PE3 977 aaPredicted RBP21.81■■□□□ 1.08
HMGB3P22-201ENST00000442010 CTAGE1Q96RT6 745 aa21.81■■□□□ 1.08
HMGB3P22-201ENST00000442010 FAM217BQ9NTX9 383 aaPredicted RBP21.81■■□□□ 1.08
HMGB3P22-201ENST00000442010 RBM28Q9NW13 759 aaKnown RBP21.81■■□□□ 1.08
HMGB3P22-201ENST00000442010 SNX14Q9Y5W7 946 aa21.81■■□□□ 1.08
HMGB3P22-201ENST00000442010 STAM2O75886 525 aa21.8■■□□□ 1.08
HMGB3P22-201ENST00000442010 NEFLP07196 543 aa21.8■■□□□ 1.08
HMGB3P22-201ENST00000442010 CCL23P55773 120 aa21.8■■□□□ 1.08
HMGB3P22-201ENST00000442010 SEMA3FQ13275 785 aa21.8■■□□□ 1.08
HMGB3P22-201ENST00000442010 FAM47CQ5HY64 1035 aa21.8■■□□□ 1.08
HMGB3P22-201ENST00000442010 PSRC1Q6PGN9 363 aaPredicted RBP21.8■■□□□ 1.08
HMGB3P22-201ENST00000442010 SYNE3Q6ZMZ3 975 aa21.8■■□□□ 1.08
HMGB3P22-201ENST00000442010 SMARCC2Q8TAQ2 1214 aa21.8■■□□□ 1.08
HMGB3P22-201ENST00000442010 MYO9BQ13459 2157 aa21.8■■□□□ 1.08
HMGB3P22-201ENST00000442010 HAS3O00219 553 aa21.79■■□□□ 1.08
HMGB3P22-201ENST00000442010 ZBTB43O43298 467 aa21.79■■□□□ 1.08
HMGB3P22-201ENST00000442010 GGPS1O95749 300 aa21.79■■□□□ 1.08
HMGB3P22-201ENST00000442010 CPA1P15085 419 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms