RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 GREB1LQ9C091 1923 aaPredicted RBP7.55□□□□□ -1.2
HDAC6-210ENST00000441703 BAZ2AQ9UIF9 1905 aaKnown RBP7.55□□□□□ -1.2
HDAC6-210ENST00000441703 USP17L12C9JPN9 530 aa7.55□□□□□ -1.2
HDAC6-210ENST00000441703 USP17L21D6R901 530 aa7.55□□□□□ -1.2
HDAC6-210ENST00000441703 TBX10O75333 385 aa7.55□□□□□ -1.2
HDAC6-210ENST00000441703 CSPG5O95196 566 aa7.55□□□□□ -1.2
HDAC6-210ENST00000441703 BAG4O95429 457 aaKnown RBP7.55□□□□□ -1.2
HDAC6-210ENST00000441703 PDGFBP01127 241 aaPredicted RBP7.55□□□□□ -1.2
HDAC6-210ENST00000441703 ICAM3P32942 547 aa7.55□□□□□ -1.2
HDAC6-210ENST00000441703 CTNNB1P35222 781 aa7.55□□□□□ -1.2
HDAC6-210ENST00000441703 RARSP54136 660 aaKnown RBP7.55□□□□□ -1.2
HDAC6-210ENST00000441703 MFAP1P55081 439 aaKnown RBP7.55□□□□□ -1.2
HDAC6-210ENST00000441703 NUCB2P80303 420 aa7.55□□□□□ -1.2
HDAC6-210ENST00000441703 CBX2Q14781 532 aaPredicted RBP7.55□□□□□ -1.2
HDAC6-210ENST00000441703 PTGISQ16647 500 aa7.55□□□□□ -1.2
HDAC6-210ENST00000441703 CCDC158Q5M9N0 1113 aa7.55□□□□□ -1.2
HDAC6-210ENST00000441703 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.55□□□□□ -1.2
HDAC6-210ENST00000441703 FBXO16Q8IX29 292 aaPredicted RBP7.55□□□□□ -1.2
HDAC6-210ENST00000441703 PPP1R13LQ8WUF5 828 aa7.55□□□□□ -1.2
HDAC6-210ENST00000441703 FGD4Q96M96 766 aa7.55□□□□□ -1.2
HDAC6-210ENST00000441703 PHF7Q9BWX1 381 aaPredicted RBP7.55□□□□□ -1.2
HDAC6-210ENST00000441703 LMAN2LQ9H0V9 348 aa7.55□□□□□ -1.2
HDAC6-210ENST00000441703 MFSD1Q9H3U5 465 aa7.55□□□□□ -1.2
HDAC6-210ENST00000441703 RAVER2Q9HCJ3 691 aaKnown RBP7.55□□□□□ -1.2
HDAC6-210ENST00000441703 GPR108Q9NPR9 543 aa7.55□□□□□ -1.2
HDAC6-210ENST00000441703 SMC4Q9NTJ3 1288 aa7.55□□□□□ -1.2
HDAC6-210ENST00000441703 TMEM51Q9NW97 253 aa7.55□□□□□ -1.2
HDAC6-210ENST00000441703 SWAP70Q9UH65 585 aa7.55□□□□□ -1.2
HDAC6-210ENST00000441703 DDX49Q9Y6V7 483 aaKnown RBP7.55□□□□□ -1.2
HDAC6-210ENST00000441703 TPRP12270 2363 aaKnown RBP7.55□□□□□ -1.2
HDAC6-210ENST00000441703 ZFHX4Q86UP3 3567 aa7.54□□□□□ -1.2
HDAC6-210ENST00000441703 TRIP12Q14669 1992 aaPredicted RBP7.54□□□□□ -1.2
HDAC6-210ENST00000441703 SCN10AQ9Y5Y9 1956 aa7.54□□□□□ -1.2
HDAC6-210ENST00000441703 K7ELQ4 463 aaPredicted RBP7.54□□□□□ -1.2
HDAC6-210ENST00000441703 IDH1O75874 414 aaKnown RBP7.54□□□□□ -1.2
HDAC6-210ENST00000441703 LMNAP02545 664 aaKnown RBP7.54□□□□□ -1.2
HDAC6-210ENST00000441703 CXCL10P02778 98 aa7.54□□□□□ -1.2
HDAC6-210ENST00000441703 GNAI3P08754 354 aa7.54□□□□□ -1.2
HDAC6-210ENST00000441703 CT47B1P0C2W7 299 aaPredicted RBP7.54□□□□□ -1.2
HDAC6-210ENST00000441703 AKR1B1P15121 316 aa7.54□□□□□ -1.2
HDAC6-210ENST00000441703 ZAP70P43403 619 aa7.54□□□□□ -1.2
HDAC6-210ENST00000441703 CNTN2Q02246 1040 aa7.54□□□□□ -1.2
HDAC6-210ENST00000441703 TNNI3KQ59H18 835 aa7.54□□□□□ -1.2
HDAC6-210ENST00000441703 TMEM105Q8N8V8 129 aa7.54□□□□□ -1.2
HDAC6-210ENST00000441703 OR6J1Q8NGC5 347 aa7.54□□□□□ -1.2
HDAC6-210ENST00000441703 SP7Q8TDD2 431 aaPredicted RBP7.54□□□□□ -1.2
HDAC6-210ENST00000441703 DBNDD2Q9BQY9 259 aa7.54□□□□□ -1.2
HDAC6-210ENST00000441703 RIOK1Q9BRS2 568 aaKnown RBP7.54□□□□□ -1.2
HDAC6-210ENST00000441703 API5Q9BZZ5 524 aaKnown RBP7.54□□□□□ -1.2
HDAC6-210ENST00000441703 RBSNQ9H1K0 784 aa7.54□□□□□ -1.2
HDAC6-210ENST00000441703 VTA1Q9NP79 307 aa7.54□□□□□ -1.2
HDAC6-210ENST00000441703 PDGFCQ9NRA1 345 aa7.54□□□□□ -1.2
HDAC6-210ENST00000441703 HOMER2Q9NSB8 354 aa7.54□□□□□ -1.2
HDAC6-210ENST00000441703 MCM9Q9NXL9 1143 aa7.54□□□□□ -1.2
HDAC6-210ENST00000441703 NAP1L2Q9ULW6 460 aaPredicted RBP7.54□□□□□ -1.2
HDAC6-210ENST00000441703 FPGT-TNNI3KV9GXZ4 949 aa7.54□□□□□ -1.2
HDAC6-210ENST00000441703 TRIOO75962 3097 aa7.54□□□□□ -1.2
HDAC6-210ENST00000441703 ATP2A1O14983 1001 aa7.53□□□□□ -1.2
HDAC6-210ENST00000441703 LINC01565O15544 149 aa7.53□□□□□ -1.2
HDAC6-210ENST00000441703 KPNA6O60684 536 aa7.53□□□□□ -1.2
HDAC6-210ENST00000441703 NBNO60934 754 aa7.53□□□□□ -1.2
HDAC6-210ENST00000441703 EYA4O95677 639 aa7.53□□□□□ -1.2
HDAC6-210ENST00000441703 EEF2P13639 858 aaKnown RBP7.53□□□□□ -1.2
HDAC6-210ENST00000441703 HTRA4P83105 476 aaPredicted RBP7.53□□□□□ -1.2
HDAC6-210ENST00000441703 G3BP1Q13283 466 aaKnown RBP eCLIP7.53□□□□□ -1.28e-6■□□□□ 9
HDAC6-210ENST00000441703 RSPO4Q2I0M5 234 aaPredicted RBP7.53□□□□□ -1.2
HDAC6-210ENST00000441703 DUSP28Q4G0W2 176 aa7.53□□□□□ -1.2
HDAC6-210ENST00000441703 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.53□□□□□ -1.2
HDAC6-210ENST00000441703 SIAH1Q8IUQ4 282 aa7.53□□□□□ -1.2
HDAC6-210ENST00000441703 FAM133AQ8N9E0 248 aa7.53□□□□□ -1.2
HDAC6-210ENST00000441703 PRPF38AQ8NAV1 312 aaKnown RBP7.53□□□□□ -1.2
HDAC6-210ENST00000441703 KIFC2Q96AC6 838 aa7.53□□□□□ -1.2
HDAC6-210ENST00000441703 CCDC17Q96LX7 622 aa7.53□□□□□ -1.2
HDAC6-210ENST00000441703 HAUS7Q99871 368 aa7.53□□□□□ -1.2
HDAC6-210ENST00000441703 C11orf84Q9BUA3 381 aaPredicted RBP7.53□□□□□ -1.2
HDAC6-210ENST00000441703 SEMA4AQ9H3S1 761 aa7.53□□□□□ -1.2
HDAC6-210ENST00000441703 ACAD9Q9H845 621 aa7.53□□□□□ -1.2
HDAC6-210ENST00000441703 LMBRD1Q9NUN5 540 aa7.53□□□□□ -1.2
HDAC6-210ENST00000441703 DLL3Q9NYJ7 618 aa7.53□□□□□ -1.2
HDAC6-210ENST00000441703 RALYQ9UKM9 306 aaKnown RBP7.53□□□□□ -1.2
HDAC6-210ENST00000441703 RWDD3Q9Y3V2 267 aa7.53□□□□□ -1.2
HDAC6-210ENST00000441703 USP15Q9Y4E8 981 aaPredicted RBP7.53□□□□□ -1.2
HDAC6-210ENST00000441703 MYH4Q9Y623 1939 aa7.52□□□□□ -1.2
HDAC6-210ENST00000441703 GVINP1Q7Z2Y8 2422 aa7.52□□□□□ -1.2
HDAC6-210ENST00000441703 NCOR2Q9Y618 2525 aa7.52□□□□□ -1.21
HDAC6-210ENST00000441703 NLRC5Q86WI3 1866 aa7.52□□□□□ -1.21
HDAC6-210ENST00000441703 LGR5O75473 907 aa7.52□□□□□ -1.21
HDAC6-210ENST00000441703 UPP2O95045 317 aa7.52□□□□□ -1.21
HDAC6-210ENST00000441703 RB1P06400 928 aa7.52□□□□□ -1.21
HDAC6-210ENST00000441703 SDHBP21912 280 aa7.52□□□□□ -1.21
HDAC6-210ENST00000441703 ADAM15Q13444 863 aa7.52□□□□□ -1.21
HDAC6-210ENST00000441703 TCTN1Q2MV58 587 aa7.52□□□□□ -1.21
HDAC6-210ENST00000441703 UVSSAQ2YD98 709 aa7.52□□□□□ -1.21
HDAC6-210ENST00000441703 ZSCAN23Q3MJ62 389 aa7.52□□□□□ -1.21
HDAC6-210ENST00000441703 KIAA0319Q5VV43 1072 aa7.52□□□□□ -1.21
HDAC6-210ENST00000441703 ASTLQ6HA08 431 aaPredicted RBP7.52□□□□□ -1.21
HDAC6-210ENST00000441703 TAPT1Q6NXT6 567 aa7.52□□□□□ -1.21
HDAC6-210ENST00000441703 LRSAM1Q6UWE0 723 aa7.52□□□□□ -1.21
HDAC6-210ENST00000441703 UBALD2Q8IYN6 164 aa7.52□□□□□ -1.21
HDAC6-210ENST00000441703 FIBCD1Q8N539 461 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms