RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 HEATR3Q7Z4Q2 680 aa15.84■□□□□ 0.13
LTBR-202ENST00000440421 GPKOWQ92917 476 aaPredicted RBP eCLIP15.84■□□□□ 0.13
LTBR-202ENST00000440421 TOX2Q96NM4 488 aa15.84■□□□□ 0.13
LTBR-202ENST00000440421 MRVI1Q9Y6F6 885 aa15.84■□□□□ 0.13
LTBR-202ENST00000440421 MROH7Q68CQ1 1323 aa15.84■□□□□ 0.13
LTBR-202ENST00000440421 CNTNAP5Q8WYK1 1306 aa15.84■□□□□ 0.13
LTBR-202ENST00000440421 TRIOBPQ9H2D6 2365 aa15.84■□□□□ 0.13
LTBR-202ENST00000440421 A0A1W2PPC1 479 aa15.83■□□□□ 0.12
LTBR-202ENST00000440421 EPB41L2O43491 1005 aaKnown RBP15.83■□□□□ 0.12
LTBR-202ENST00000440421 GH1P01241 217 aa15.83■□□□□ 0.12
LTBR-202ENST00000440421 ITGB8P26012 769 aa15.83■□□□□ 0.12
LTBR-202ENST00000440421 CDC27P30260 824 aa15.83■□□□□ 0.12
LTBR-202ENST00000440421 PURAQ00577 322 aaKnown RBP15.83■□□□□ 0.12
LTBR-202ENST00000440421 VSIG10LQ86VR7 867 aa15.83■□□□□ 0.12
LTBR-202ENST00000440421 FAM217BQ9NTX9 383 aaPredicted RBP15.83■□□□□ 0.12
LTBR-202ENST00000440421 POLR3EQ9NVU0 708 aa15.83■□□□□ 0.12
LTBR-202ENST00000440421 DDX41Q9UJV9 622 aaKnown RBP15.83■□□□□ 0.12
LTBR-202ENST00000440421 V9GY48 417 aaPredicted RBP15.83■□□□□ 0.12
LTBR-202ENST00000440421 GRIN2DO15399 1336 aa15.83■□□□□ 0.12
LTBR-202ENST00000440421 MEIS2O14770 477 aa15.82■□□□□ 0.12
LTBR-202ENST00000440421 KIAA0355O15063 1070 aa15.82■□□□□ 0.12
LTBR-202ENST00000440421 TLR3O15455 904 aaKnown RBP15.82■□□□□ 0.12
LTBR-202ENST00000440421 SORBS3O60504 671 aa15.82■□□□□ 0.12
LTBR-202ENST00000440421 RGS20O76081 388 aa15.82■□□□□ 0.12
LTBR-202ENST00000440421 RAG1P15918 1043 aa15.82■□□□□ 0.12
LTBR-202ENST00000440421 METAP2P50579 478 aaKnown RBP eCLIP15.82■□□□□ 0.12
LTBR-202ENST00000440421 ARHGAP1Q07960 439 aa15.82■□□□□ 0.12
LTBR-202ENST00000440421 FUT2Q10981 343 aa15.82■□□□□ 0.12
LTBR-202ENST00000440421 UBE2SQ16763 222 aa15.82■□□□□ 0.12
LTBR-202ENST00000440421 WWC2Q6AWC2 1192 aa15.82■□□□□ 0.12
LTBR-202ENST00000440421 FAM126BQ8IXS8 530 aa15.82■□□□□ 0.12
LTBR-202ENST00000440421 TDHQ8IZJ6 230 aa15.82■□□□□ 0.12
LTBR-202ENST00000440421 PPP1R13LQ8WUF5 828 aa15.82■□□□□ 0.12
LTBR-202ENST00000440421 AFG1LQ8WV93 481 aa15.82■□□□□ 0.12
LTBR-202ENST00000440421 MTG1Q9BT17 334 aaPredicted RBP15.82■□□□□ 0.12
LTBR-202ENST00000440421 PSTPIP2Q9H939 334 aa15.82■□□□□ 0.12
LTBR-202ENST00000440421 A6NJR5 290 aa15.81■□□□□ 0.12
LTBR-202ENST00000440421 PIK3CDO00329 1044 aa15.81■□□□□ 0.12
LTBR-202ENST00000440421 ADD1P35611 737 aaKnown RBP15.81■□□□□ 0.12
LTBR-202ENST00000440421 RCAN1P53805 252 aa15.81■□□□□ 0.12
LTBR-202ENST00000440421 CHMP4BP1P59074 171 aa15.81■□□□□ 0.12
LTBR-202ENST00000440421 RUFY3Q7L099 469 aa15.81■□□□□ 0.12
LTBR-202ENST00000440421 SLC43A3Q8NBI5 491 aa15.81■□□□□ 0.12
LTBR-202ENST00000440421 ZSWIM6Q9HCJ5 1215 aa15.81■□□□□ 0.12
LTBR-202ENST00000440421 RTEL1Q9NZ71 1219 aa15.81■□□□□ 0.12
LTBR-202ENST00000440421 FRMPD4Q14CM0 1322 aa15.8■□□□□ 0.12
LTBR-202ENST00000440421 SOX1O00570 391 aaPredicted RBP15.8■□□□□ 0.12
LTBR-202ENST00000440421 KPNA6O60684 536 aa15.8■□□□□ 0.12
LTBR-202ENST00000440421 SLC34A2O95436 690 aa15.8■□□□□ 0.12
LTBR-202ENST00000440421 MMP3P08254 477 aa15.8■□□□□ 0.12
LTBR-202ENST00000440421 NAPAP54920 295 aa15.8■□□□□ 0.12
LTBR-202ENST00000440421 MRPS9P82933 396 aaKnown RBP15.8■□□□□ 0.12
LTBR-202ENST00000440421 DHX37Q8IY37 1157 aaKnown RBP15.8■□□□□ 0.12
LTBR-202ENST00000440421 AGXT2Q9BYV1 514 aa15.8■□□□□ 0.12
LTBR-202ENST00000440421 UPF3BQ9BZI7 483 aaKnown RBP15.8■□□□□ 0.12
LTBR-202ENST00000440421 PPP1R12CQ9BZL4 782 aa15.8■□□□□ 0.12
LTBR-202ENST00000440421 TRPV6Q9H1D0 765 aa15.8■□□□□ 0.12
LTBR-202ENST00000440421 TBX21Q9UL17 535 aa15.8■□□□□ 0.12
LTBR-202ENST00000440421 CYP46A1Q9Y6A2 500 aa15.8■□□□□ 0.12
LTBR-202ENST00000440421 CCDC196A0A1B0GTZ2 297 aa15.79■□□□□ 0.12
LTBR-202ENST00000440421 B4GALT4O60513 344 aa15.79■□□□□ 0.12
LTBR-202ENST00000440421 CD4P01730 458 aa15.79■□□□□ 0.12
LTBR-202ENST00000440421 SP2Q02086 613 aa15.79■□□□□ 0.12
LTBR-202ENST00000440421 NBPF20Q3BBV1 942 aa15.79■□□□□ 0.12
LTBR-202ENST00000440421 FAM47CQ5HY64 1035 aa15.79■□□□□ 0.12
LTBR-202ENST00000440421 TYW1BQ6NUM6 668 aa15.79■□□□□ 0.12
LTBR-202ENST00000440421 KCNV1Q6PIU1 500 aa15.79■□□□□ 0.12
LTBR-202ENST00000440421 FBXL16Q8N461 479 aa15.79■□□□□ 0.12
LTBR-202ENST00000440421 LARP6Q9BRS8 491 aaKnown RBP15.79■□□□□ 0.12
LTBR-202ENST00000440421 SPDYE3A6NKU9 549 aa15.78■□□□□ 0.12
LTBR-202ENST00000440421 STXBP3O00186 592 aa15.78■□□□□ 0.12
LTBR-202ENST00000440421 PPFIA3O75145 1194 aa15.78■□□□□ 0.12
LTBR-202ENST00000440421 GGPS1O95749 300 aa15.78■□□□□ 0.12
LTBR-202ENST00000440421 TIMP1P01033 207 aa15.78■□□□□ 0.12
LTBR-202ENST00000440421 UBA1P22314 1058 aaKnown RBP15.78■□□□□ 0.12
LTBR-202ENST00000440421 CCT2P78371 535 aaKnown RBP15.78■□□□□ 0.12
LTBR-202ENST00000440421 FPGSQ05932 587 aa15.78■□□□□ 0.12
LTBR-202ENST00000440421 LAMC2Q13753 1193 aa15.78■□□□□ 0.12
LTBR-202ENST00000440421 TOB2Q14106 344 aaPredicted RBP15.78■□□□□ 0.12
LTBR-202ENST00000440421 GNPTABQ3T906 1256 aa15.78■□□□□ 0.12
LTBR-202ENST00000440421 PCNX4Q63HM2 1172 aa15.78■□□□□ 0.12
LTBR-202ENST00000440421 LRCH3Q96II8 777 aa15.78■□□□□ 0.12
LTBR-202ENST00000440421 SPATA33Q96N06 139 aa15.78■□□□□ 0.12
LTBR-202ENST00000440421 TM6SF1Q9BZW5 370 aa15.78■□□□□ 0.12
LTBR-202ENST00000440421 ALDH8A1Q9H2A2 487 aaPredicted RBP15.78■□□□□ 0.12
LTBR-202ENST00000440421 NCOA5Q9HCD5 579 aaKnown RBP15.78■□□□□ 0.12
LTBR-202ENST00000440421 TRMT13Q9NUP7 481 aaKnown RBP15.78■□□□□ 0.12
LTBR-202ENST00000440421 PCDHA6Q9UN73 950 aa15.78■□□□□ 0.12
LTBR-202ENST00000440421 PCDHA8Q9Y5H6 950 aa15.78■□□□□ 0.12
LTBR-202ENST00000440421 MYH7BA7E2Y1 1941 aa15.78■□□□□ 0.12
LTBR-202ENST00000440421 STAM2O75886 525 aa15.77■□□□□ 0.12
LTBR-202ENST00000440421 PDIA3P30101 505 aaKnown RBP15.77■□□□□ 0.12
LTBR-202ENST00000440421 ADCY7P51828 1080 aa15.77■□□□□ 0.12
LTBR-202ENST00000440421 EPHB4P54760 987 aa15.77■□□□□ 0.12
LTBR-202ENST00000440421 SHHQ15465 462 aa15.77■□□□□ 0.12
LTBR-202ENST00000440421 DGKDQ16760 1214 aa15.77■□□□□ 0.12
LTBR-202ENST00000440421 C9orf50Q5SZB4 431 aa15.77■□□□□ 0.12
LTBR-202ENST00000440421 CELF3Q5SZQ8 465 aaKnown RBP15.77■□□□□ 0.12
LTBR-202ENST00000440421 MYSM1Q5VVJ2 828 aa15.77■□□□□ 0.12
LTBR-202ENST00000440421 PPP1R18Q6NYC8 613 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms