RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 CCND2P30279 289 aa27.22■■□□□ 1.95
VARS-217ENST00000440048 LY6KQ17RY6 165 aa27.22■■□□□ 1.95
VARS-217ENST00000440048 WWC2Q6AWC2 1192 aa27.22■■□□□ 1.95
VARS-217ENST00000440048 GDF15Q99988 308 aa27.22■■□□□ 1.95
VARS-217ENST00000440048 A0A0U1RQG5 324 aaPredicted RBP27.21■■□□□ 1.95
VARS-217ENST00000440048 PQBP1O60828 265 aaKnown RBP27.21■■□□□ 1.95
VARS-217ENST00000440048 CABYRO75952 493 aa27.21■■□□□ 1.95
VARS-217ENST00000440048 RGS20O76081 388 aa27.21■■□□□ 1.95
VARS-217ENST00000440048 PDIA3P30101 505 aaKnown RBP27.21■■□□□ 1.95
VARS-217ENST00000440048 CPT1AP50416 773 aa27.21■■□□□ 1.95
VARS-217ENST00000440048 MYH7BA7E2Y1 1941 aa27.2■■□□□ 1.95
VARS-217ENST00000440048 EIF5BO60841 1220 aaKnown RBP27.2■■□□□ 1.94
VARS-217ENST00000440048 MAGEA10P43363 369 aaPredicted RBP27.2■■□□□ 1.94
VARS-217ENST00000440048 CDK7P50613 346 aa27.2■■□□□ 1.94
VARS-217ENST00000440048 ANKRD33Q7Z3H0 272 aa27.2■■□□□ 1.94
VARS-217ENST00000440048 ZFP91Q96JP5 570 aaPredicted RBP27.2■■□□□ 1.94
VARS-217ENST00000440048 PDLIM7Q9NR12 457 aa27.2■■□□□ 1.94
VARS-217ENST00000440048 PRKAG2Q9UGJ0 569 aa27.2■■□□□ 1.94
VARS-217ENST00000440048 DDX41Q9UJV9 622 aaKnown RBP27.2■■□□□ 1.94
VARS-217ENST00000440048 MRVI1Q9Y6F6 885 aa27.2■■□□□ 1.94
VARS-217ENST00000440048 ARVCFO00192 962 aa27.19■■□□□ 1.94
VARS-217ENST00000440048 SEC24BO95487 1268 aa27.19■■□□□ 1.94
VARS-217ENST00000440048 GH1P01241 217 aa27.19■■□□□ 1.94
VARS-217ENST00000440048 ANAPC15P60006 121 aa27.19■■□□□ 1.94
VARS-217ENST00000440048 ARHGAP1Q07960 439 aa27.19■■□□□ 1.94
VARS-217ENST00000440048 UBE2SQ16763 222 aa27.19■■□□□ 1.94
VARS-217ENST00000440048 TYW1BQ6NUM6 668 aa27.19■■□□□ 1.94
VARS-217ENST00000440048 SH3RF1Q7Z6J0 888 aa27.19■■□□□ 1.94
VARS-217ENST00000440048 TOX2Q96NM4 488 aa27.19■■□□□ 1.94
VARS-217ENST00000440048 PRDM5Q9NQX1 630 aaPredicted RBP27.19■■□□□ 1.94
VARS-217ENST00000440048 PDRG1Q9NUG6 133 aa27.19■■□□□ 1.94
VARS-217ENST00000440048 POLR3EQ9NVU0 708 aa27.19■■□□□ 1.94
VARS-217ENST00000440048 A6NJR5 290 aa27.18■■□□□ 1.94
VARS-217ENST00000440048 NAPAP54920 295 aa27.18■■□□□ 1.94
VARS-217ENST00000440048 MRPS9P82933 396 aaKnown RBP27.18■■□□□ 1.94
VARS-217ENST00000440048 BRDTQ58F21 947 aaPredicted RBP27.18■■□□□ 1.94
VARS-217ENST00000440048 PPP1R18Q6NYC8 613 aa27.18■■□□□ 1.94
VARS-217ENST00000440048 LARP6Q9BRS8 491 aaKnown RBP27.18■■□□□ 1.94
VARS-217ENST00000440048 LTBP2Q14767 1821 aa27.18■■□□□ 1.94
VARS-217ENST00000440048 hCG_1984214I3L0E3 225 aa27.17■■□□□ 1.94
VARS-217ENST00000440048 STXBP3O00186 592 aa27.17■■□□□ 1.94
VARS-217ENST00000440048 MYL3P08590 195 aa27.17■■□□□ 1.94
VARS-217ENST00000440048 CLTBP09497 229 aa27.17■■□□□ 1.94
VARS-217ENST00000440048 CCT2P78371 535 aaKnown RBP27.17■■□□□ 1.94
VARS-217ENST00000440048 PURAQ00577 322 aaKnown RBP27.17■■□□□ 1.94
VARS-217ENST00000440048 MDM2Q00987 491 aaPredicted RBP27.17■■□□□ 1.94
VARS-217ENST00000440048 ZNF713Q8N859 430 aaPredicted RBP27.17■■□□□ 1.94
VARS-217ENST00000440048 SLC43A3Q8NBI5 491 aa27.17■■□□□ 1.94
VARS-217ENST00000440048 NCOA5Q9HCD5 579 aaKnown RBP27.17■■□□□ 1.94
VARS-217ENST00000440048 BARHL2Q9NY43 387 aa27.17■■□□□ 1.94
VARS-217ENST00000440048 GRIN2DO15399 1336 aa27.16■■□□□ 1.94
VARS-217ENST00000440048 MROH7Q68CQ1 1323 aa27.16■■□□□ 1.94
VARS-217ENST00000440048 TRIM43BA6NCK2 446 aa27.16■■□□□ 1.94
VARS-217ENST00000440048 DCDC2CA8MYV0 355 aa27.16■■□□□ 1.94
VARS-217ENST00000440048 PSMC6P62333 389 aa27.16■■□□□ 1.94
VARS-217ENST00000440048 FAAP100Q0VG06 881 aa27.16■■□□□ 1.94
VARS-217ENST00000440048 ITGA7Q13683 1181 aa27.16■■□□□ 1.94
VARS-217ENST00000440048 NTRK3Q16288 839 aa27.16■■□□□ 1.94
VARS-217ENST00000440048 PFKFB3Q16875 520 aaPredicted RBP27.16■■□□□ 1.94
VARS-217ENST00000440048 KCNV1Q6PIU1 500 aa27.16■■□□□ 1.94
VARS-217ENST00000440048 AFG1LQ8WV93 481 aa27.16■■□□□ 1.94
VARS-217ENST00000440048 TRIM43Q96BQ3 446 aaPredicted RBP27.16■■□□□ 1.94
VARS-217ENST00000440048 ZNF274Q96GC6 653 aaPredicted RBP27.16■■□□□ 1.94
VARS-217ENST00000440048 PRPF3O43395 683 aaKnown RBP27.15■■□□□ 1.94
VARS-217ENST00000440048 STAM2O75886 525 aa27.15■■□□□ 1.94
VARS-217ENST00000440048 SCG2P13521 617 aa27.15■■□□□ 1.94
VARS-217ENST00000440048 PCNX4Q63HM2 1172 aa27.15■■□□□ 1.94
VARS-217ENST00000440048 PHKBQ93100 1093 aa27.15■■□□□ 1.94
VARS-217ENST00000440048 LBHD1Q9BQE6 289 aaPredicted RBP27.15■■□□□ 1.94
VARS-217ENST00000440048 MTG1Q9BT17 334 aaPredicted RBP27.15■■□□□ 1.94
VARS-217ENST00000440048 RIC8AQ9NPQ8 531 aa27.15■■□□□ 1.94
VARS-217ENST00000440048 SCN10AQ9Y5Y9 1956 aa27.15■■□□□ 1.94
VARS-217ENST00000440048 KPNA6O60684 536 aa27.14■■□□□ 1.94
VARS-217ENST00000440048 PKN1Q16512 942 aa27.14■■□□□ 1.94
VARS-217ENST00000440048 XRRA1Q6P2D8 792 aa27.14■■□□□ 1.94
VARS-217ENST00000440048 EMID1Q96A84 441 aaPredicted RBP27.14■■□□□ 1.94
VARS-217ENST00000440048 IL17RAQ96F46 866 aa27.14■■□□□ 1.94
VARS-217ENST00000440048 INPP4AQ96PE3 977 aaPredicted RBP27.14■■□□□ 1.94
VARS-217ENST00000440048 TMEM39AQ9NV64 488 aa27.14■■□□□ 1.94
VARS-217ENST00000440048 RTEL1Q9NZ71 1219 aa27.14■■□□□ 1.94
VARS-217ENST00000440048 PCDHA6Q9UN73 950 aa27.14■■□□□ 1.94
VARS-217ENST00000440048 PCDHA8Q9Y5H6 950 aa27.14■■□□□ 1.94
VARS-217ENST00000440048 SMCO2A6NFE2 343 aa27.13■■□□□ 1.93
VARS-217ENST00000440048 SPDYE3A6NKU9 549 aa27.13■■□□□ 1.93
VARS-217ENST00000440048 KIAA0355O15063 1070 aa27.13■■□□□ 1.93
VARS-217ENST00000440048 MMP3P08254 477 aa27.13■■□□□ 1.93
VARS-217ENST00000440048 TGFB3P10600 412 aa27.13■■□□□ 1.93
VARS-217ENST00000440048 IFNAR1P17181 557 aa27.13■■□□□ 1.93
VARS-217ENST00000440048 ADCY7P51828 1080 aa27.13■■□□□ 1.93
VARS-217ENST00000440048 SP2Q02086 613 aa27.13■■□□□ 1.93
VARS-217ENST00000440048 LAMC2Q13753 1193 aa27.13■■□□□ 1.93
VARS-217ENST00000440048 GNPTABQ3T906 1256 aa27.13■■□□□ 1.93
VARS-217ENST00000440048 FAM126BQ8IXS8 530 aa27.13■■□□□ 1.93
VARS-217ENST00000440048 DHX37Q8IY37 1157 aaKnown RBP27.13■■□□□ 1.93
VARS-217ENST00000440048 PPFIA3O75145 1194 aa27.12■■□□□ 1.93
VARS-217ENST00000440048 ICAM3P32942 547 aa27.12■■□□□ 1.93
VARS-217ENST00000440048 AKAP17AQ02040 695 aaKnown RBP27.12■■□□□ 1.93
VARS-217ENST00000440048 TEX2Q8IWB9 1127 aa27.12■■□□□ 1.93
VARS-217ENST00000440048 SLC26A6Q9BXS9 759 aa27.12■■□□□ 1.93
VARS-217ENST00000440048 RNF26Q9BY78 433 aaPredicted RBP27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms