RNA–Protein interactions for RNA: ENST00000439706.5

SLC38A1-202, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 3,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-202ENST00000439706 GIMAP8Q8ND71 665 aaPredicted RBP13.69□□□□□ -0.22
SLC38A1-202ENST00000439706 ATP6V1G3Q96LB4 118 aa13.69□□□□□ -0.22
SLC38A1-202ENST00000439706 CELF4Q9BZC1 486 aaKnown RBP13.69□□□□□ -0.22
SLC38A1-202ENST00000439706 LRRC4CQ9HCJ2 640 aa13.69□□□□□ -0.22
SLC38A1-202ENST00000439706 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.69□□□□□ -0.22
SLC38A1-202ENST00000439706 CHUKO15111 745 aa13.69□□□□□ -0.22
SLC38A1-202ENST00000439706 LONP1P36776 959 aaKnown RBP13.69□□□□□ -0.22
SLC38A1-202ENST00000439706 IGHMBP2P38935 993 aaKnown RBP13.69□□□□□ -0.22
SLC38A1-202ENST00000439706 MAGOHP61326 146 aaKnown RBP13.69□□□□□ -0.22
SLC38A1-202ENST00000439706 MAGOHBQ96A72 148 aaKnown RBP13.69□□□□□ -0.22
SLC38A1-202ENST00000439706 AFDNP55196 1824 aaKnown RBP13.69□□□□□ -0.22
SLC38A1-202ENST00000439706 USP17L8P0C7I0 530 aa13.68□□□□□ -0.22
SLC38A1-202ENST00000439706 GNAT2P19087 354 aa13.68□□□□□ -0.22
SLC38A1-202ENST00000439706 VWA3BQ502W6 1294 aa13.68□□□□□ -0.22
SLC38A1-202ENST00000439706 PIGBQ92521 554 aa13.68□□□□□ -0.22
SLC38A1-202ENST00000439706 TRIM9Q9C026 710 aa13.68□□□□□ -0.22
SLC38A1-202ENST00000439706 VEZTQ9HBM0 779 aa13.68□□□□□ -0.22
SLC38A1-202ENST00000439706 AMACRQ9UHK6 382 aa13.68□□□□□ -0.22
SLC38A1-202ENST00000439706 CNTNAP5Q8WYK1 1306 aa13.68□□□□□ -0.22
SLC38A1-202ENST00000439706 SLCO1A2P46721 670 aa13.68□□□□□ -0.22
SLC38A1-202ENST00000439706 NEDD9Q14511 834 aa13.68□□□□□ -0.22
SLC38A1-202ENST00000439706 TNFRSF25Q93038 417 aa13.68□□□□□ -0.22
SLC38A1-202ENST00000439706 TTYH3Q9C0H2 523 aa13.68□□□□□ -0.22
SLC38A1-202ENST00000439706 MKNK2Q9HBH9 465 aa13.68□□□□□ -0.22
SLC38A1-202ENST00000439706 DDX20Q9UHI6 824 aaKnown RBP13.68□□□□□ -0.22
SLC38A1-202ENST00000439706 PLAGL2Q9UPG8 496 aa13.68□□□□□ -0.22
SLC38A1-202ENST00000439706 PHRF1Q9P1Y6 1649 aaKnown RBP13.68□□□□□ -0.22
SLC38A1-202ENST00000439706 MYBL1P10243 752 aa13.68□□□□□ -0.22
SLC38A1-202ENST00000439706 ELF1P32519 619 aa13.68□□□□□ -0.22
SLC38A1-202ENST00000439706 CHRNDQ07001 517 aa13.68□□□□□ -0.22
SLC38A1-202ENST00000439706 SNCBQ16143 134 aa13.68□□□□□ -0.22
SLC38A1-202ENST00000439706 MAEAQ7L5Y9 396 aa13.68□□□□□ -0.22
SLC38A1-202ENST00000439706 IQCKQ8N0W5 287 aa13.68□□□□□ -0.22
SLC38A1-202ENST00000439706 ATP8A1Q9Y2Q0 1164 aa13.68□□□□□ -0.22
SLC38A1-202ENST00000439706 MAP3K15Q6ZN16 1313 aa13.68□□□□□ -0.22
SLC38A1-202ENST00000439706 DAPK3O43293 454 aa13.67□□□□□ -0.22
SLC38A1-202ENST00000439706 NAPAP54920 295 aa13.67□□□□□ -0.22
SLC38A1-202ENST00000439706 TBC1D1Q86TI0 1168 aaPredicted RBP13.67□□□□□ -0.22
SLC38A1-202ENST00000439706 KIAA0895Q8NCT3 520 aa13.67□□□□□ -0.22
SLC38A1-202ENST00000439706 LSM14BQ9BX40 385 aaKnown RBP13.67□□□□□ -0.22
SLC38A1-202ENST00000439706 MLXIPLQ9NP71 852 aa13.67□□□□□ -0.22
SLC38A1-202ENST00000439706 SAP30BPQ9UHR5 308 aaKnown RBP13.67□□□□□ -0.22
SLC38A1-202ENST00000439706 L3MBTL1Q9Y468 752 aa13.67□□□□□ -0.22
SLC38A1-202ENST00000439706 CD2APQ9Y5K6 639 aa13.67□□□□□ -0.22
SLC38A1-202ENST00000439706 BICDL2A1A5D9 508 aa13.67□□□□□ -0.22
SLC38A1-202ENST00000439706 POTEMA6NI47 508 aa13.67□□□□□ -0.22
SLC38A1-202ENST00000439706 GSCP56915 257 aaPredicted RBP13.67□□□□□ -0.22
SLC38A1-202ENST00000439706 ADCY1Q08828 1119 aa13.67□□□□□ -0.22
SLC38A1-202ENST00000439706 SUSD4Q5VX71 490 aa13.67□□□□□ -0.22
SLC38A1-202ENST00000439706 WDR17Q8IZU2 1322 aa13.67□□□□□ -0.22
SLC38A1-202ENST00000439706 MGARPQ8TDB4 240 aa13.67□□□□□ -0.22
SLC38A1-202ENST00000439706 OSBPL7Q9BZF2 842 aa13.67□□□□□ -0.22
SLC38A1-202ENST00000439706 UBA5Q9GZZ9 404 aa13.67□□□□□ -0.22
SLC38A1-202ENST00000439706 RBM28Q9NW13 759 aaKnown RBP13.67□□□□□ -0.22
SLC38A1-202ENST00000439706 ITGA4P13612 1032 aa13.67□□□□□ -0.22
SLC38A1-202ENST00000439706 HSD17B3P37058 310 aa13.67□□□□□ -0.22
SLC38A1-202ENST00000439706 PSEN1P49768 467 aa13.67□□□□□ -0.22
SLC38A1-202ENST00000439706 MSL1Q68DK7 614 aa13.67□□□□□ -0.22
SLC38A1-202ENST00000439706 CYB5D1Q6P9G0 228 aa13.67□□□□□ -0.22
SLC38A1-202ENST00000439706 FAM114A1Q8IWE2 563 aa13.67□□□□□ -0.22
SLC38A1-202ENST00000439706 PARP9Q8IXQ6 854 aa13.67□□□□□ -0.22
SLC38A1-202ENST00000439706 PIK3R5Q8WYR1 880 aa13.67□□□□□ -0.22
SLC38A1-202ENST00000439706 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.67□□□□□ -0.226e-8■□□□□ 9.1
SLC38A1-202ENST00000439706 FBXL5Q9UKA1 691 aa13.67□□□□□ -0.22
SLC38A1-202ENST00000439706 A0A087X0T9 212 aa13.66□□□□□ -0.22
SLC38A1-202ENST00000439706 GMNCA6NCL1 334 aa13.66□□□□□ -0.22
SLC38A1-202ENST00000439706 FAM228BP0C875 321 aa13.66□□□□□ -0.22
SLC38A1-202ENST00000439706 ACTN1P12814 892 aa13.66□□□□□ -0.22
SLC38A1-202ENST00000439706 DHX9Q08211 1270 aaKnown RBP13.66□□□□□ -0.22
SLC38A1-202ENST00000439706 ACCSLQ4AC99 568 aa13.66□□□□□ -0.22
SLC38A1-202ENST00000439706 TCERG1LQ5VWI1 586 aa13.66□□□□□ -0.22
SLC38A1-202ENST00000439706 PNMA1Q8ND90 353 aa13.66□□□□□ -0.22
SLC38A1-202ENST00000439706 SEPT11Q9NVA2 429 aaKnown RBP13.66□□□□□ -0.22
SLC38A1-202ENST00000439706 CNOT8Q9UFF9 292 aaKnown RBP13.66□□□□□ -0.22
SLC38A1-202ENST00000439706 RHOBTB3O94955 611 aa13.66□□□□□ -0.22
SLC38A1-202ENST00000439706 PFKFB3Q16875 520 aaPredicted RBP13.66□□□□□ -0.22
SLC38A1-202ENST00000439706 PLCD4Q9BRC7 762 aa13.66□□□□□ -0.22
SLC38A1-202ENST00000439706 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.66□□□□□ -0.224e-8■■■■■ 96.7
SLC38A1-202ENST00000439706 TMEM260Q9NX78 707 aa13.66□□□□□ -0.22
SLC38A1-202ENST00000439706 FAM107AO95990 144 aa13.65□□□□□ -0.22
SLC38A1-202ENST00000439706 EZRP15311 586 aaKnown RBP13.65□□□□□ -0.22
SLC38A1-202ENST00000439706 EIF6P56537 245 aaKnown RBP13.65□□□□□ -0.22
SLC38A1-202ENST00000439706 KCNQ4P56696 695 aa13.65□□□□□ -0.22
SLC38A1-202ENST00000439706 ERVK-9P63128 1117 aa13.65□□□□□ -0.22
SLC38A1-202ENST00000439706 KLHL30Q0D2K2 578 aa13.65□□□□□ -0.22
SLC38A1-202ENST00000439706 SLC9C1Q4G0N8 1177 aa13.65□□□□□ -0.22
SLC38A1-202ENST00000439706 DHTKD1Q96HY7 919 aaPredicted RBP13.65□□□□□ -0.22
SLC38A1-202ENST00000439706 NEUROG2Q9H2A3 272 aa13.65□□□□□ -0.22
SLC38A1-202ENST00000439706 VCPKMTQ9H867 229 aa13.65□□□□□ -0.22
SLC38A1-202ENST00000439706 TPX2Q9ULW0 747 aaKnown RBP13.65□□□□□ -0.22
SLC38A1-202ENST00000439706 VIMP08670 466 aaKnown RBP13.65□□□□□ -0.22
SLC38A1-202ENST00000439706 KLRK1P26718 216 aa13.65□□□□□ -0.22
SLC38A1-202ENST00000439706 SKOR1P84550 965 aa13.65□□□□□ -0.22
SLC38A1-202ENST00000439706 MYO1EQ12965 1108 aa13.65□□□□□ -0.22
SLC38A1-202ENST00000439706 KDM7AQ6ZMT4 941 aa13.65□□□□□ -0.22
SLC38A1-202ENST00000439706 CACNA2D3Q8IZS8 1091 aa13.65□□□□□ -0.22
SLC38A1-202ENST00000439706 SEC16BQ96JE7 1060 aa13.65□□□□□ -0.22
SLC38A1-202ENST00000439706 FBXO3Q9UK99 471 aa13.65□□□□□ -0.22
SLC38A1-202ENST00000439706 LEMD3Q9Y2U8 911 aa13.65□□□□□ -0.22
SLC38A1-202ENST00000439706 PCDH11XQ9BZA7 1347 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms