RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 LMCD1Q9NZU5 365 aa6.96□□□□□ -1.3
BDNF-211ENST00000439476 DIP2CQ9Y2E4 1556 aa6.96□□□□□ -1.3
BDNF-211ENST00000439476 ADGRL3Q9HAR2 1447 aa6.96□□□□□ -1.3
BDNF-211ENST00000439476 FRMPD1Q5SYB0 1578 aa6.96□□□□□ -1.3
BDNF-211ENST00000439476 H0YCG3 227 aa6.96□□□□□ -1.3
BDNF-211ENST00000439476 CREB3O43889 395 aa6.96□□□□□ -1.3
BDNF-211ENST00000439476 CEP104O60308 925 aa6.96□□□□□ -1.3
BDNF-211ENST00000439476 CCNT1O60563 726 aaKnown RBP6.96□□□□□ -1.3
BDNF-211ENST00000439476 MYCLP1P12525 358 aaPredicted RBP6.96□□□□□ -1.3
BDNF-211ENST00000439476 TXKP42681 527 aa6.96□□□□□ -1.3
BDNF-211ENST00000439476 CTSWP56202 376 aa6.96□□□□□ -1.3
BDNF-211ENST00000439476 CCDC62Q6P9F0 684 aa6.96□□□□□ -1.3
BDNF-211ENST00000439476 B4GALNT2Q8NHY0 566 aa6.96□□□□□ -1.3
BDNF-211ENST00000439476 WHAMMQ8TF30 809 aa6.96□□□□□ -1.3
BDNF-211ENST00000439476 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.96□□□□□ -1.3
BDNF-211ENST00000439476 NGLY1Q96IV0 654 aa6.96□□□□□ -1.3
BDNF-211ENST00000439476 FNBP1Q96RU3 617 aa6.96□□□□□ -1.3
BDNF-211ENST00000439476 GREM2Q9H772 168 aa6.96□□□□□ -1.3
BDNF-211ENST00000439476 KIF13AQ9H1H9 1805 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 PPLO60437 1756 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 KRT38O76015 456 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 MYL1P05976 194 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 VIMP08670 466 aaKnown RBP6.95□□□□□ -1.3
BDNF-211ENST00000439476 IMPDH2P12268 514 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 EEF1GP26641 437 aaKnown RBP6.95□□□□□ -1.3
BDNF-211ENST00000439476 CDC27P30260 824 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 VSNL1P62760 191 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 CEP85LQ5SZL2 805 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 CYB5R4Q7L1T6 521 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 DYMQ7RTS9 669 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 REXO1L1PQ8IX06 675 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 DRAXINQ8NBI3 349 aaPredicted RBP6.95□□□□□ -1.3
BDNF-211ENST00000439476 IL17RAQ96F46 866 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 MIS12Q9H081 205 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 RNF14Q9UBS8 474 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 RWDD2AQ9UIY3 292 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 DEPDC5O75140 1603 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 SEMA3EO15041 775 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 BUB1O43683 1085 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 TBC1D8O95759 1140 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 PSMC1P62191 440 aaKnown RBP6.95□□□□□ -1.3
BDNF-211ENST00000439476 C2orf54Q08AI8 447 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 DDB1Q16531 1140 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 FAM47AQ5JRC9 791 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 ZNF658Q5TYW1 1059 aaPredicted RBP6.95□□□□□ -1.3
BDNF-211ENST00000439476 SFMBT2Q5VUG0 894 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 TBC1D10CQ8IV04 446 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 BLIDQ8IZY5 108 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 TC2NQ8N9U0 490 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 RETREG2Q8NC44 543 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 SAAL1Q96ER3 474 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 MRPL44Q9H9J2 332 aaKnown RBP6.95□□□□□ -1.3
BDNF-211ENST00000439476 ABHD10Q9NUJ1 306 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 AATFQ9NY61 560 aaKnown RBP eCLIP6.95□□□□□ -1.3
BDNF-211ENST00000439476 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.95□□□□□ -1.3
BDNF-211ENST00000439476 PIK3C2BO00750 1634 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 USP17L12C9JPN9 530 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 USP17L21D6R901 530 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 SCG2P13521 617 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 PECAM1P16284 738 aaPredicted RBP6.95□□□□□ -1.3
BDNF-211ENST00000439476 CDC25AP30304 524 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 TRAPPC10P48553 1259 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 CYP27A1Q02318 531 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 KCNA1Q09470 495 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 LRRC23Q53EV4 343 aaPredicted RBP6.95□□□□□ -1.3
BDNF-211ENST00000439476 SEPT14Q6ZU15 432 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 ZNF579Q8NAF0 562 aaKnown RBP6.95□□□□□ -1.3
BDNF-211ENST00000439476 GRK7Q8WTQ7 553 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 PLEKHG4BQ96PX9 1271 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 MMADHCQ9H3L0 296 aaPredicted RBP6.95□□□□□ -1.3
BDNF-211ENST00000439476 FAM114A2Q9NRY5 505 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 LRWD1Q9UFC0 647 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 ARHGEF28Q8N1W1 1705 aaKnown RBP6.95□□□□□ -1.3
BDNF-211ENST00000439476 WDR19Q8NEZ3 1342 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 LAD1O00515 517 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 SLC8A1P32418 973 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 LONP1P36776 959 aaKnown RBP6.95□□□□□ -1.3
BDNF-211ENST00000439476 EPHB4P54760 987 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 FMR1Q06787 632 aaKnown RBP eCLIP6.95□□□□□ -1.3
BDNF-211ENST00000439476 KLHL30Q0D2K2 578 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 RNF168Q8IYW5 571 aaPredicted RBP6.95□□□□□ -1.3
BDNF-211ENST00000439476 RAB3IPQ96QF0 476 aaPredicted RBP6.95□□□□□ -1.3
BDNF-211ENST00000439476 TYW1Q9NV66 732 aaKnown RBP6.95□□□□□ -1.3
BDNF-211ENST00000439476 ARPP21Q9UBL0 812 aaPredicted RBP6.95□□□□□ -1.3
BDNF-211ENST00000439476 DNM3Q9UQ16 869 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 JAG2Q9Y219 1238 aa6.95□□□□□ -1.3
BDNF-211ENST00000439476 RTCBQ9Y3I0 505 aaKnown RBP6.95□□□□□ -1.3
BDNF-211ENST00000439476 BZW2Q9Y6E2 419 aaKnown RBP6.95□□□□□ -1.3
BDNF-211ENST00000439476 PLEKHG2Q9H7P9 1386 aa6.94□□□□□ -1.3
BDNF-211ENST00000439476 NCAPD2Q15021 1401 aa6.94□□□□□ -1.3
BDNF-211ENST00000439476 A0A0G2JLW4 131 aa6.94□□□□□ -1.3
BDNF-211ENST00000439476 ERVV-2B6SEH9 535 aa6.94□□□□□ -1.3
BDNF-211ENST00000439476 PRKAB2O43741 272 aa6.94□□□□□ -1.3
BDNF-211ENST00000439476 SRGAP2O75044 1071 aa6.94□□□□□ -1.3
BDNF-211ENST00000439476 MAN1A1P33908 653 aa6.94□□□□□ -1.3
BDNF-211ENST00000439476 ADCY7P51828 1080 aa6.94□□□□□ -1.3
BDNF-211ENST00000439476 GUCY2DQ02846 1103 aa6.94□□□□□ -1.3
BDNF-211ENST00000439476 CCDC38Q502W7 563 aa6.94□□□□□ -1.3
BDNF-211ENST00000439476 TCP11X2Q5H9J9 407 aa6.94□□□□□ -1.3
BDNF-211ENST00000439476 ZNF662Q6ZS27 426 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms