RNA–Protein interactions for RNA: ENST00000439068.6

LSMEM1-202, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene LSMEM1, Length 730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-202ENST00000439068 LAMA3Q16787 3333 aa10.68□□□□□ -0.7
LSMEM1-202ENST00000439068 MSCO60682 206 aa10.67□□□□□ -0.7
LSMEM1-202ENST00000439068 SLURP2P0DP57 97 aa10.67□□□□□ -0.7
LSMEM1-202ENST00000439068 VAMP1P23763 118 aa10.67□□□□□ -0.7
LSMEM1-202ENST00000439068 HERVK_113P62684 666 aa10.67□□□□□ -0.7
LSMEM1-202ENST00000439068 CACNB2Q08289 660 aaPredicted RBP10.67□□□□□ -0.7
LSMEM1-202ENST00000439068 TTC39BQ5VTQ0 682 aaPredicted RBP10.67□□□□□ -0.7
LSMEM1-202ENST00000439068 PLEKHH3Q7Z736 793 aa10.67□□□□□ -0.7
LSMEM1-202ENST00000439068 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.67□□□□□ -0.7
LSMEM1-202ENST00000439068 VWA5B2Q8N398 1253 aa10.67□□□□□ -0.7
LSMEM1-202ENST00000439068 SPATA5Q8NB90 893 aa10.67□□□□□ -0.7
LSMEM1-202ENST00000439068 NSUN4Q96CB9 384 aaKnown RBP10.67□□□□□ -0.7
LSMEM1-202ENST00000439068 EDC3Q96F86 508 aaKnown RBP10.67□□□□□ -0.7
LSMEM1-202ENST00000439068 MARK1Q9P0L2 795 aa10.67□□□□□ -0.7
LSMEM1-202ENST00000439068 PA2G4Q9UQ80 394 aaKnown RBP10.67□□□□□ -0.7
LSMEM1-202ENST00000439068 SRGAP3O43295 1099 aa10.66□□□□□ -0.7
LSMEM1-202ENST00000439068 MMP20O60882 483 aa10.66□□□□□ -0.7
LSMEM1-202ENST00000439068 GNAI3P08754 354 aa10.66□□□□□ -0.7
LSMEM1-202ENST00000439068 UQCRFS1P1P0C7P4 283 aa10.66□□□□□ -0.7
LSMEM1-202ENST00000439068 ERVK-24P63145 666 aa10.66□□□□□ -0.7
LSMEM1-202ENST00000439068 TFCP2Q12800 502 aa10.66□□□□□ -0.7
LSMEM1-202ENST00000439068 G3BP1Q13283 466 aaKnown RBP eCLIP10.66□□□□□ -0.7
LSMEM1-202ENST00000439068 SENP6Q9GZR1 1112 aaPredicted RBP10.66□□□□□ -0.7
LSMEM1-202ENST00000439068 HMG20BQ9P0W2 317 aa10.66□□□□□ -0.7
LSMEM1-202ENST00000439068 KANSL3Q9P2N6 904 aa10.66□□□□□ -0.7
LSMEM1-202ENST00000439068 RFX7Q2KHR2 1363 aa10.65□□□□□ -0.7
LSMEM1-202ENST00000439068 DOCK3Q8IZD9 2030 aa10.65□□□□□ -0.7
LSMEM1-202ENST00000439068 PFASO15067 1338 aa10.65□□□□□ -0.7
LSMEM1-202ENST00000439068 MYH2Q9UKX2 1941 aa10.65□□□□□ -0.7
LSMEM1-202ENST00000439068 CDC14CA4D256 554 aa10.65□□□□□ -0.7
LSMEM1-202ENST00000439068 IGSF3O75054 1194 aa10.65□□□□□ -0.7
LSMEM1-202ENST00000439068 HLA-DOAP06340 250 aa10.65□□□□□ -0.7
LSMEM1-202ENST00000439068 COL6A1P12109 1028 aa10.65□□□□□ -0.7
LSMEM1-202ENST00000439068 NFKB1P19838 968 aa10.65□□□□□ -0.7
LSMEM1-202ENST00000439068 CNGA1P29973 690 aa10.65□□□□□ -0.7
LSMEM1-202ENST00000439068 GNA15P30679 374 aa10.65□□□□□ -0.7
LSMEM1-202ENST00000439068 CTBSQ01459 385 aa10.65□□□□□ -0.7
LSMEM1-202ENST00000439068 SPEM2Q0P670 501 aa10.65□□□□□ -0.7
LSMEM1-202ENST00000439068 LRRC26Q2I0M4 334 aa10.65□□□□□ -0.7
LSMEM1-202ENST00000439068 NAA16Q6N069 864 aaPredicted RBP10.65□□□□□ -0.7
LSMEM1-202ENST00000439068 GPR142Q7Z601 462 aa10.65□□□□□ -0.7
LSMEM1-202ENST00000439068 APBA2Q99767 749 aa10.65□□□□□ -0.7
LSMEM1-202ENST00000439068 PAGR1Q9BTK6 254 aa10.65□□□□□ -0.7
LSMEM1-202ENST00000439068 COL25A1Q9BXS0 654 aaPredicted RBP10.65□□□□□ -0.7
LSMEM1-202ENST00000439068 RBPJLQ9UBG7 517 aa10.65□□□□□ -0.7
LSMEM1-202ENST00000439068 NOB1Q9ULX3 412 aaKnown RBP10.65□□□□□ -0.7
LSMEM1-202ENST00000439068 COL2A1P02458 1487 aaPredicted RBP10.64□□□□□ -0.71
LSMEM1-202ENST00000439068 SORBS3O60504 671 aa10.64□□□□□ -0.71
LSMEM1-202ENST00000439068 CT47B1P0C2W7 299 aaPredicted RBP10.64□□□□□ -0.71
LSMEM1-202ENST00000439068 CES1P23141 567 aa10.64□□□□□ -0.71
LSMEM1-202ENST00000439068 CCND3P30281 292 aaPredicted RBP10.64□□□□□ -0.71
LSMEM1-202ENST00000439068 SLFN5Q08AF3 891 aa10.64□□□□□ -0.71
LSMEM1-202ENST00000439068 CCDC158Q5M9N0 1113 aa10.64□□□□□ -0.71
LSMEM1-202ENST00000439068 WDR78Q5VTH9 848 aa10.64□□□□□ -0.71
LSMEM1-202ENST00000439068 ARRDC4Q8NCT1 418 aa10.64□□□□□ -0.71
LSMEM1-202ENST00000439068 SH3RF3Q8TEJ3 882 aaPredicted RBP10.64□□□□□ -0.71
LSMEM1-202ENST00000439068 FBF1Q8TES7 1133 aa10.64□□□□□ -0.71
LSMEM1-202ENST00000439068 TGFBRAP1Q8WUH2 860 aa10.64□□□□□ -0.71
LSMEM1-202ENST00000439068 USP6NLQ92738 828 aa10.64□□□□□ -0.71
LSMEM1-202ENST00000439068 C11orf16Q9NQ32 467 aa10.64□□□□□ -0.71
LSMEM1-202ENST00000439068 LATS2Q9NRM7 1088 aa10.64□□□□□ -0.71
LSMEM1-202ENST00000439068 VTI1BQ9UEU0 232 aa10.64□□□□□ -0.71
LSMEM1-202ENST00000439068 RABGAP1Q9Y3P9 1069 aa10.64□□□□□ -0.71
LSMEM1-202ENST00000439068 MYH13Q9UKX3 1938 aa10.64□□□□□ -0.71
LSMEM1-202ENST00000439068 ZNF521Q96K83 1311 aa10.63□□□□□ -0.71
LSMEM1-202ENST00000439068 SLC15A5A6NIM6 579 aa10.63□□□□□ -0.71
LSMEM1-202ENST00000439068 RARAP10276 462 aa10.63□□□□□ -0.71
LSMEM1-202ENST00000439068 USP14P54578 494 aa10.63□□□□□ -0.71
LSMEM1-202ENST00000439068 FGD1P98174 961 aa10.63□□□□□ -0.71
LSMEM1-202ENST00000439068 LAMC2Q13753 1193 aa10.63□□□□□ -0.71
LSMEM1-202ENST00000439068 CERS3Q8IU89 383 aa10.63□□□□□ -0.71
LSMEM1-202ENST00000439068 LPAR1Q92633 364 aa10.63□□□□□ -0.71
LSMEM1-202ENST00000439068 BHMTQ93088 406 aa10.63□□□□□ -0.71
LSMEM1-202ENST00000439068 FEZ1Q99689 392 aa10.63□□□□□ -0.71
LSMEM1-202ENST00000439068 OSBPL7Q9BZF2 842 aa10.63□□□□□ -0.71
LSMEM1-202ENST00000439068 TXNRD2Q9NNW7 524 aa10.63□□□□□ -0.71
LSMEM1-202ENST00000439068 NPHS2Q9NP85 383 aa10.63□□□□□ -0.71
LSMEM1-202ENST00000439068 AATFQ9NY61 560 aaKnown RBP eCLIP10.63□□□□□ -0.71
LSMEM1-202ENST00000439068 SLC5A4Q9NY91 659 aa10.63□□□□□ -0.71
LSMEM1-202ENST00000439068 DOCK2Q92608 1830 aa10.63□□□□□ -0.71
LSMEM1-202ENST00000439068 DOCK1Q14185 1865 aa10.62□□□□□ -0.71
LSMEM1-202ENST00000439068 DNM1LO00429 736 aa10.62□□□□□ -0.71
LSMEM1-202ENST00000439068 TCF3P15923 654 aa10.62□□□□□ -0.71
LSMEM1-202ENST00000439068 RRP1BQ14684 758 aaKnown RBP10.62□□□□□ -0.71
LSMEM1-202ENST00000439068 CCL14Q16627 93 aa10.62□□□□□ -0.71
LSMEM1-202ENST00000439068 TTC39AQ5SRH9 613 aa10.62□□□□□ -0.71
LSMEM1-202ENST00000439068 DPP9Q86TI2 863 aa10.62□□□□□ -0.71
LSMEM1-202ENST00000439068 METTL16Q86W50 562 aaKnown RBP10.62□□□□□ -0.71
LSMEM1-202ENST00000439068 MAPKAPK5Q8IW41 473 aa10.62□□□□□ -0.71
LSMEM1-202ENST00000439068 ZNF384Q8TF68 577 aa10.62□□□□□ -0.71
LSMEM1-202ENST00000439068 PNMA5Q96PV4 448 aa10.62□□□□□ -0.71
LSMEM1-202ENST00000439068 PORCNQ9H237 461 aa10.62□□□□□ -0.71
LSMEM1-202ENST00000439068 CABP5Q9NP86 173 aa10.62□□□□□ -0.71
LSMEM1-202ENST00000439068 DDX20Q9UHI6 824 aaKnown RBP10.62□□□□□ -0.71
LSMEM1-202ENST00000439068 PALD1Q9ULE6 856 aa10.62□□□□□ -0.71
LSMEM1-202ENST00000439068 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.62□□□□□ -0.71
LSMEM1-202ENST00000439068 KBTBD13C9JR72 458 aa10.61□□□□□ -0.71
LSMEM1-202ENST00000439068 IPO8O15397 1037 aaKnown RBP10.61□□□□□ -0.71
LSMEM1-202ENST00000439068 GDF11O95390 407 aa10.61□□□□□ -0.71
LSMEM1-202ENST00000439068 FGFR3P22607 806 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms