RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 TRIM13O60858 407 aa5.21□□□□□ -1.58
HMGB3P12-201ENST00000438745 PLA2G1BP04054 148 aaKnown RBP5.21□□□□□ -1.58
HMGB3P12-201ENST00000438745 LCP1P13796 627 aa5.21□□□□□ -1.58
HMGB3P12-201ENST00000438745 PMLP29590 882 aa5.21□□□□□ -1.58
HMGB3P12-201ENST00000438745 BCL6P41182 706 aa5.21□□□□□ -1.58
HMGB3P12-201ENST00000438745 CACNB2Q08289 660 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P12-201ENST00000438745 HSP90AA2PQ14568 343 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P12-201ENST00000438745 VWA3BQ502W6 1294 aa5.21□□□□□ -1.58
HMGB3P12-201ENST00000438745 MROH9Q5TGP6 573 aa5.21□□□□□ -1.58
HMGB3P12-201ENST00000438745 NBPF6Q5VWK0 638 aa5.21□□□□□ -1.58
HMGB3P12-201ENST00000438745 CEP68Q76N32 757 aa5.21□□□□□ -1.58
HMGB3P12-201ENST00000438745 TEX2Q8IWB9 1127 aa5.21□□□□□ -1.58
HMGB3P12-201ENST00000438745 FNIP1Q8TF40 1166 aa5.21□□□□□ -1.58
HMGB3P12-201ENST00000438745 NBPF4Q96M43 638 aa5.21□□□□□ -1.58
HMGB3P12-201ENST00000438745 PARD6AQ9NPB6 346 aa5.21□□□□□ -1.58
HMGB3P12-201ENST00000438745 FBXL7Q9UJT9 491 aa5.21□□□□□ -1.58
HMGB3P12-201ENST00000438745 SIT1Q9Y3P8 196 aa5.21□□□□□ -1.58
HMGB3P12-201ENST00000438745 H7BY64 318 aa5.2□□□□□ -1.58
HMGB3P12-201ENST00000438745 STK10O94804 968 aaKnown RBP5.2□□□□□ -1.58
HMGB3P12-201ENST00000438745 FGFR1P11362 822 aa5.2□□□□□ -1.58
HMGB3P12-201ENST00000438745 MC3RP41968 323 aa5.2□□□□□ -1.58
HMGB3P12-201ENST00000438745 KCNJ6P48051 423 aa5.2□□□□□ -1.58
HMGB3P12-201ENST00000438745 LIMS1P48059 325 aa5.2□□□□□ -1.58
HMGB3P12-201ENST00000438745 DLX2Q07687 328 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P12-201ENST00000438745 LSAMPQ13449 338 aa5.2□□□□□ -1.58
HMGB3P12-201ENST00000438745 RSPO2Q6UXX9 243 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P12-201ENST00000438745 MIB1Q86YT6 1006 aa5.2□□□□□ -1.58
HMGB3P12-201ENST00000438745 DCP2Q8IU60 420 aaKnown RBP5.2□□□□□ -1.58
HMGB3P12-201ENST00000438745 PPIL6Q8IXY8 311 aa5.2□□□□□ -1.58
HMGB3P12-201ENST00000438745 LINC00482Q8N8I6 264 aa5.2□□□□□ -1.58
HMGB3P12-201ENST00000438745 KCTD13Q8WZ19 329 aa5.2□□□□□ -1.58
HMGB3P12-201ENST00000438745 SEC14L1Q92503 715 aa5.2□□□□□ -1.58
HMGB3P12-201ENST00000438745 ARMC5Q96C12 935 aa5.2□□□□□ -1.58
HMGB3P12-201ENST00000438745 C20orf173Q96LM9 149 aa5.2□□□□□ -1.58
HMGB3P12-201ENST00000438745 CCDC113Q9H0I3 377 aa5.2□□□□□ -1.58
HMGB3P12-201ENST00000438745 BCAS3Q9H6U6 928 aa5.2□□□□□ -1.58
HMGB3P12-201ENST00000438745 ARHGEF4Q9NR80 690 aa5.2□□□□□ -1.58
HMGB3P12-201ENST00000438745 GPR27Q9NS67 375 aa5.2□□□□□ -1.58
HMGB3P12-201ENST00000438745 UNC13AQ9UPW8 1703 aa5.2□□□□□ -1.58
HMGB3P12-201ENST00000438745 SH3D21A4FU49 640 aa5.19□□□□□ -1.58
HMGB3P12-201ENST00000438745 IQCA1LA6NCM1 817 aa5.19□□□□□ -1.58
HMGB3P12-201ENST00000438745 TADA3O75528 432 aa5.19□□□□□ -1.58
HMGB3P12-201ENST00000438745 INHBBP09529 407 aa5.19□□□□□ -1.58
HMGB3P12-201ENST00000438745 BMP7P18075 431 aa5.19□□□□□ -1.58
HMGB3P12-201ENST00000438745 ATP2B1P20020 1258 aa5.19□□□□□ -1.58
HMGB3P12-201ENST00000438745 HOXA5P20719 270 aa5.19□□□□□ -1.58
HMGB3P12-201ENST00000438745 FPR2P25090 351 aa5.19□□□□□ -1.58
HMGB3P12-201ENST00000438745 VMACQ2NL98 169 aa5.19□□□□□ -1.58
HMGB3P12-201ENST00000438745 SAPCD2Q86UD0 394 aa5.19□□□□□ -1.58
HMGB3P12-201ENST00000438745 CKAP2LQ8IYA6 745 aa5.19□□□□□ -1.58
HMGB3P12-201ENST00000438745 OSBP2Q969R2 916 aa5.19□□□□□ -1.58
HMGB3P12-201ENST00000438745 TRMT2BQ96GJ1 504 aaKnown RBP5.19□□□□□ -1.58
HMGB3P12-201ENST00000438745 TMEM169Q96HH4 297 aa5.19□□□□□ -1.58
HMGB3P12-201ENST00000438745 IER2Q9BTL4 223 aa5.19□□□□□ -1.58
HMGB3P12-201ENST00000438745 XYLT2Q9H1B5 865 aa5.19□□□□□ -1.58
HMGB3P12-201ENST00000438745 MYO1BO43795 1136 aa5.18□□□□□ -1.58
HMGB3P12-201ENST00000438745 BUD31P41223 144 aaPredicted RBP5.18□□□□□ -1.58
HMGB3P12-201ENST00000438745 RASGRF1Q13972 1273 aa5.18□□□□□ -1.58
HMGB3P12-201ENST00000438745 EMC4Q5J8M3 183 aa5.18□□□□□ -1.58
HMGB3P12-201ENST00000438745 AARSD1Q9BTE6 412 aaKnown RBP5.18□□□□□ -1.58
HMGB3P12-201ENST00000438745 TANGO6Q9C0B7 1094 aa5.18□□□□□ -1.58
HMGB3P12-201ENST00000438745 AP5M1Q9H0R1 490 aa5.18□□□□□ -1.58
HMGB3P12-201ENST00000438745 LUC7LQ9NQ29 371 aaKnown RBP5.18□□□□□ -1.58
HMGB3P12-201ENST00000438745 BTG4Q9NY30 223 aa5.18□□□□□ -1.58
HMGB3P12-201ENST00000438745 PCDHA2Q9Y5H9 948 aa5.18□□□□□ -1.58
HMGB3P12-201ENST00000438745 PDPK1O15530 556 aa5.17□□□□□ -1.58
HMGB3P12-201ENST00000438745 MSCO60682 206 aa5.17□□□□□ -1.58
HMGB3P12-201ENST00000438745 PABPC1P11940 636 aaKnown RBP5.17□□□□□ -1.58
HMGB3P12-201ENST00000438745 SERINC3Q13530 473 aa5.17□□□□□ -1.58
HMGB3P12-201ENST00000438745 NTRK3Q16288 839 aa5.17□□□□□ -1.58
HMGB3P12-201ENST00000438745 LCE5AQ5TCM9 118 aa5.17□□□□□ -1.58
HMGB3P12-201ENST00000438745 LRRC47Q8N1G4 583 aaKnown RBP5.17□□□□□ -1.58
HMGB3P12-201ENST00000438745 SMARCC2Q8TAQ2 1214 aa5.17□□□□□ -1.58
HMGB3P12-201ENST00000438745 DCAF4Q8WV16 495 aa5.17□□□□□ -1.58
HMGB3P12-201ENST00000438745 NOX5Q96PH1 765 aa5.17□□□□□ -1.58
HMGB3P12-201ENST00000438745 TRIM55Q9BYV6 548 aa5.17□□□□□ -1.58
HMGB3P12-201ENST00000438745 PDGFDQ9GZP0 370 aaPredicted RBP5.17□□□□□ -1.58
HMGB3P12-201ENST00000438745 PCDH18Q9HCL0 1135 aa5.17□□□□□ -1.58
HMGB3P12-201ENST00000438745 SPATA6Q9NWH7 488 aaPredicted RBP5.17□□□□□ -1.58
HMGB3P12-201ENST00000438745 SIRPGQ9P1W8 387 aa5.17□□□□□ -1.58
HMGB3P12-201ENST00000438745 ZNF652Q9Y2D9 606 aa5.17□□□□□ -1.58
HMGB3P12-201ENST00000438745 FAN1Q9Y2M0 1017 aa5.17□□□□□ -1.58
HMGB3P12-201ENST00000438745 PMF1-BGLAPU3KQ54 211 aa5.17□□□□□ -1.58
HMGB3P12-201ENST00000438745 SHROOM4Q9ULL8 1493 aa5.17□□□□□ -1.58
HMGB3P12-201ENST00000438745 B8ZZF3 427 aa5.16□□□□□ -1.58
HMGB3P12-201ENST00000438745 PRRG2O14669 202 aa5.16□□□□□ -1.58
HMGB3P12-201ENST00000438745 HGSO14964 777 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P12-201ENST00000438745 ADCY3O60266 1144 aa5.16□□□□□ -1.58
HMGB3P12-201ENST00000438745 C8BP07358 591 aa5.16□□□□□ -1.58
HMGB3P12-201ENST00000438745 SLURP1P55000 103 aa5.16□□□□□ -1.58
HMGB3P12-201ENST00000438745 NSMFQ6X4W1 530 aa5.16□□□□□ -1.58
HMGB3P12-201ENST00000438745 ETV3LQ6ZN32 361 aa5.16□□□□□ -1.58
HMGB3P12-201ENST00000438745 SPATC1Q76KD6 591 aa5.16□□□□□ -1.58
HMGB3P12-201ENST00000438745 LRP10Q7Z4F1 713 aa5.16□□□□□ -1.58
HMGB3P12-201ENST00000438745 MILR1Q7Z6M3 343 aa5.16□□□□□ -1.58
HMGB3P12-201ENST00000438745 ZNF526Q8TF50 670 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P12-201ENST00000438745 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.16□□□□□ -1.58
HMGB3P12-201ENST00000438745 ZFYVE21Q9BQ24 234 aa5.16□□□□□ -1.58
HMGB3P12-201ENST00000438745 HIRIP3Q9BW71 556 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P12-201ENST00000438745 SPATA9Q9BWV2 254 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms