RNA–Protein interactions for RNA: ENST00000438008.5

NCSTN-208, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-208ENST00000438008 COPS5Q92905 334 aa20.5■□□□□ 0.87
NCSTN-208ENST00000438008 GPKOWQ92917 476 aaPredicted RBP eCLIP20.5■□□□□ 0.87
NCSTN-208ENST00000438008 GDF15Q99988 308 aa20.5■□□□□ 0.87
NCSTN-208ENST00000438008 DDX41Q9UJV9 622 aaKnown RBP20.5■□□□□ 0.87
NCSTN-208ENST00000438008 CEP290O15078 2479 aa20.5■□□□□ 0.87
NCSTN-208ENST00000438008 A0A0U1RQG5 324 aaPredicted RBP20.49■□□□□ 0.87
NCSTN-208ENST00000438008 A6NJR5 290 aa20.49■□□□□ 0.87
NCSTN-208ENST00000438008 STAM2O75886 525 aa20.49■□□□□ 0.87
NCSTN-208ENST00000438008 NTRK3Q16288 839 aa20.49■□□□□ 0.87
NCSTN-208ENST00000438008 BRDTQ58F21 947 aaPredicted RBP20.49■□□□□ 0.87
NCSTN-208ENST00000438008 XRRA1Q6P2D8 792 aa20.49■□□□□ 0.87
NCSTN-208ENST00000438008 KCNV1Q6PIU1 500 aa20.49■□□□□ 0.87
NCSTN-208ENST00000438008 CXCL17Q6UXB2 119 aa20.49■□□□□ 0.87
NCSTN-208ENST00000438008 SLC43A3Q8NBI5 491 aa20.49■□□□□ 0.87
NCSTN-208ENST00000438008 ZNF274Q96GC6 653 aaPredicted RBP20.49■□□□□ 0.87
NCSTN-208ENST00000438008 SEZ6LQ9BYH1 1024 aa20.49■□□□□ 0.87
NCSTN-208ENST00000438008 ALDH8A1Q9H2A2 487 aaPredicted RBP20.49■□□□□ 0.87
NCSTN-208ENST00000438008 PDRG1Q9NUG6 133 aa20.49■□□□□ 0.87
NCSTN-208ENST00000438008 POLR3EQ9NVU0 708 aa20.49■□□□□ 0.87
NCSTN-208ENST00000438008 BARHL2Q9NY43 387 aa20.49■□□□□ 0.87
NCSTN-208ENST00000438008 RBM27Q9P2N5 1060 aaKnown RBP20.49■□□□□ 0.87
NCSTN-208ENST00000438008 ARVCFO00192 962 aa20.48■□□□□ 0.87
NCSTN-208ENST00000438008 PRPF3O43395 683 aaKnown RBP20.48■□□□□ 0.87
NCSTN-208ENST00000438008 SEC24BO95487 1268 aa20.48■□□□□ 0.87
NCSTN-208ENST00000438008 GH1P01241 217 aa20.48■□□□□ 0.87
NCSTN-208ENST00000438008 TGFB3P10600 412 aa20.48■□□□□ 0.87
NCSTN-208ENST00000438008 BMP8BP34820 402 aa20.48■□□□□ 0.87
NCSTN-208ENST00000438008 PFKFB3Q16875 520 aaPredicted RBP20.48■□□□□ 0.87
NCSTN-208ENST00000438008 LY6KQ17RY6 165 aa20.48■□□□□ 0.87
NCSTN-208ENST00000438008 TYW1BQ6NUM6 668 aa20.48■□□□□ 0.87
NCSTN-208ENST00000438008 EMID1Q96A84 441 aaPredicted RBP20.48■□□□□ 0.87
NCSTN-208ENST00000438008 VTI1AQ96AJ9 217 aa20.48■□□□□ 0.87
NCSTN-208ENST00000438008 PDLIM7Q9NR12 457 aa20.48■□□□□ 0.87
NCSTN-208ENST00000438008 PRKAG2Q9UGJ0 569 aa20.48■□□□□ 0.87
NCSTN-208ENST00000438008 MRVI1Q9Y6F6 885 aa20.48■□□□□ 0.87
NCSTN-208ENST00000438008 MROH7Q68CQ1 1323 aa20.48■□□□□ 0.87
NCSTN-208ENST00000438008 STXBP3O00186 592 aa20.47■□□□□ 0.87
NCSTN-208ENST00000438008 KPNA6O60684 536 aa20.47■□□□□ 0.87
NCSTN-208ENST00000438008 IFNAR1P17181 557 aa20.47■□□□□ 0.87
NCSTN-208ENST00000438008 NAPAP54920 295 aa20.47■□□□□ 0.87
NCSTN-208ENST00000438008 MRPS9P82933 396 aaKnown RBP20.47■□□□□ 0.87
NCSTN-208ENST00000438008 PURAQ00577 322 aaKnown RBP20.47■□□□□ 0.87
NCSTN-208ENST00000438008 ARHGAP1Q07960 439 aa20.47■□□□□ 0.87
NCSTN-208ENST00000438008 HABP4Q5JVS0 413 aaKnown RBP20.47■□□□□ 0.87
NCSTN-208ENST00000438008 PCNX4Q63HM2 1172 aa20.47■□□□□ 0.87
NCSTN-208ENST00000438008 RIC8AQ9NPQ8 531 aa20.47■□□□□ 0.87
NCSTN-208ENST00000438008 DNAH12Q6ZR08 3092 aa20.47■□□□□ 0.87
NCSTN-208ENST00000438008 DCDC2CA8MYV0 355 aa20.46■□□□□ 0.87
NCSTN-208ENST00000438008 PQBP1O60828 265 aaKnown RBP20.46■□□□□ 0.87
NCSTN-208ENST00000438008 CLTBP09497 229 aa20.46■□□□□ 0.87
NCSTN-208ENST00000438008 SCG2P13521 617 aa20.46■□□□□ 0.87
NCSTN-208ENST00000438008 ICAM3P32942 547 aa20.46■□□□□ 0.87
NCSTN-208ENST00000438008 MAGEA10P43363 369 aaPredicted RBP20.46■□□□□ 0.87
NCSTN-208ENST00000438008 INPP4AQ96PE3 977 aaPredicted RBP20.46■□□□□ 0.87
NCSTN-208ENST00000438008 RNF26Q9BY78 433 aaPredicted RBP20.46■□□□□ 0.87
NCSTN-208ENST00000438008 GLT8D2Q9H1C3 349 aa20.46■□□□□ 0.87
NCSTN-208ENST00000438008 GRIN2DO15399 1336 aa20.46■□□□□ 0.87
NCSTN-208ENST00000438008 KIAA0355O15063 1070 aa20.45■□□□□ 0.86
NCSTN-208ENST00000438008 CCT2P78371 535 aaKnown RBP20.45■□□□□ 0.86
NCSTN-208ENST00000438008 FAAP100Q0VG06 881 aa20.45■□□□□ 0.86
NCSTN-208ENST00000438008 ITGA7Q13683 1181 aa20.45■□□□□ 0.86
NCSTN-208ENST00000438008 LAMC2Q13753 1193 aa20.45■□□□□ 0.86
NCSTN-208ENST00000438008 PKN1Q16512 942 aa20.45■□□□□ 0.86
NCSTN-208ENST00000438008 UBE2SQ16763 222 aa20.45■□□□□ 0.86
NCSTN-208ENST00000438008 GNPTABQ3T906 1256 aa20.45■□□□□ 0.86
NCSTN-208ENST00000438008 SH3RF1Q7Z6J0 888 aa20.45■□□□□ 0.86
NCSTN-208ENST00000438008 MTG1Q9BT17 334 aaPredicted RBP20.45■□□□□ 0.86
NCSTN-208ENST00000438008 PCDHA6Q9UN73 950 aa20.45■□□□□ 0.86
NCSTN-208ENST00000438008 PCDHA8Q9Y5H6 950 aa20.45■□□□□ 0.86
NCSTN-208ENST00000438008 A0A1W2PPC1 479 aa20.44■□□□□ 0.86
NCSTN-208ENST00000438008 TRIM43BA6NCK2 446 aa20.44■□□□□ 0.86
NCSTN-208ENST00000438008 SMCO2A6NFE2 343 aa20.44■□□□□ 0.86
NCSTN-208ENST00000438008 SPDYE3A6NKU9 549 aa20.44■□□□□ 0.86
NCSTN-208ENST00000438008 MYL3P08590 195 aa20.44■□□□□ 0.86
NCSTN-208ENST00000438008 ADCY7P51828 1080 aa20.44■□□□□ 0.86
NCSTN-208ENST00000438008 C8orf34Q49A92 452 aa20.44■□□□□ 0.86
NCSTN-208ENST00000438008 FAM126BQ8IXS8 530 aa20.44■□□□□ 0.86
NCSTN-208ENST00000438008 AFG1LQ8WV93 481 aa20.44■□□□□ 0.86
NCSTN-208ENST00000438008 PHKBQ93100 1093 aa20.44■□□□□ 0.86
NCSTN-208ENST00000438008 TRIM43Q96BQ3 446 aaPredicted RBP20.44■□□□□ 0.86
NCSTN-208ENST00000438008 ZFP91Q96JP5 570 aaPredicted RBP20.44■□□□□ 0.86
NCSTN-208ENST00000438008 NCOA5Q9HCD5 579 aaKnown RBP20.44■□□□□ 0.86
NCSTN-208ENST00000438008 PRDM5Q9NQX1 630 aaPredicted RBP20.44■□□□□ 0.86
NCSTN-208ENST00000438008 KIAA1217Q5T5P2 1943 aa20.43■□□□□ 0.86
NCSTN-208ENST00000438008 ESYT2A0FGR8 921 aa20.43■□□□□ 0.86
NCSTN-208ENST00000438008 SPATA31C2B4DYI2 1134 aa20.43■□□□□ 0.86
NCSTN-208ENST00000438008 FOSP01100 380 aaPredicted RBP20.43■□□□□ 0.86
NCSTN-208ENST00000438008 MMP3P08254 477 aa20.43■□□□□ 0.86
NCSTN-208ENST00000438008 AKAP17AQ02040 695 aaKnown RBP20.43■□□□□ 0.86
NCSTN-208ENST00000438008 SP2Q02086 613 aa20.43■□□□□ 0.86
NCSTN-208ENST00000438008 CELF3Q5SZQ8 465 aaKnown RBP20.43■□□□□ 0.86
NCSTN-208ENST00000438008 MYSM1Q5VVJ2 828 aa20.43■□□□□ 0.86
NCSTN-208ENST00000438008 DHX37Q8IY37 1157 aaKnown RBP20.43■□□□□ 0.86
NCSTN-208ENST00000438008 PPTC7Q8NI37 304 aa20.43■□□□□ 0.86
NCSTN-208ENST00000438008 LBHD1Q9BQE6 289 aaPredicted RBP20.43■□□□□ 0.86
NCSTN-208ENST00000438008 LARP6Q9BRS8 491 aaKnown RBP20.43■□□□□ 0.86
NCSTN-208ENST00000438008 EHMT1Q9H9B1 1298 aa20.43■□□□□ 0.86
NCSTN-208ENST00000438008 TMEM39AQ9NV64 488 aa20.43■□□□□ 0.86
NCSTN-208ENST00000438008 RTEL1Q9NZ71 1219 aa20.43■□□□□ 0.86
NCSTN-208ENST00000438008 FIBPO43427 364 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms