RNA–Protein interactions for RNA: ENST00000437564.5

MCF2-205, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-205ENST00000437564 RPGRQ92834 1020 aaKnown RBP7.11□□□□□ -1.27
MCF2-205ENST00000437564 GLMNQ92990 594 aa7.11□□□□□ -1.27
MCF2-205ENST00000437564 SPACA7Q96KW9 195 aa7.11□□□□□ -1.27
MCF2-205ENST00000437564 SPATA17Q96L03 361 aa7.11□□□□□ -1.27
MCF2-205ENST00000437564 GDAP1L1Q96MZ0 367 aa7.11□□□□□ -1.27
MCF2-205ENST00000437564 MTMR9Q96QG7 549 aa7.11□□□□□ -1.27
MCF2-205ENST00000437564 FNBP1Q96RU3 617 aa7.11□□□□□ -1.27
MCF2-205ENST00000437564 AIFM2Q9BRQ8 373 aa7.11□□□□□ -1.27
MCF2-205ENST00000437564 CARD14Q9BXL6 1004 aa7.11□□□□□ -1.27
MCF2-205ENST00000437564 NDEL1Q9GZM8 345 aa7.11□□□□□ -1.27
MCF2-205ENST00000437564 CLSTN2Q9H4D0 955 aa7.11□□□□□ -1.27
MCF2-205ENST00000437564 C12orf10Q9HB07 376 aa7.11□□□□□ -1.27
MCF2-205ENST00000437564 PFDN4Q9NQP4 134 aa7.11□□□□□ -1.27
MCF2-205ENST00000437564 FBXL5Q9UKA1 691 aa7.11□□□□□ -1.27
MCF2-205ENST00000437564 TSC22D4Q9Y3Q8 395 aa7.11□□□□□ -1.27
MCF2-205ENST00000437564 TACC3Q9Y6A5 838 aa7.11□□□□□ -1.27
MCF2-205ENST00000437564 ANKRD50Q9ULJ7 1429 aa7.11□□□□□ -1.27
MCF2-205ENST00000437564 E7ENQ6 273 aa7.11□□□□□ -1.27
MCF2-205ENST00000437564 NVLO15381 856 aaKnown RBP7.11□□□□□ -1.27
MCF2-205ENST00000437564 PLCG2P16885 1265 aa7.11□□□□□ -1.27
MCF2-205ENST00000437564 CLK2P49760 499 aaKnown RBP7.11□□□□□ -1.27
MCF2-205ENST00000437564 ZC3H6P61129 1189 aaKnown RBP7.11□□□□□ -1.27
MCF2-205ENST00000437564 KRT83P78385 493 aa7.11□□□□□ -1.27
MCF2-205ENST00000437564 PPP2R3AQ06190 1150 aa7.11□□□□□ -1.27
MCF2-205ENST00000437564 NIPAL4Q0D2K0 466 aa7.11□□□□□ -1.27
MCF2-205ENST00000437564 ADAM9Q13443 819 aa7.11□□□□□ -1.27
MCF2-205ENST00000437564 ANKDD1AQ495B1 522 aa7.11□□□□□ -1.27
MCF2-205ENST00000437564 CEP78Q5JTW2 689 aa7.11□□□□□ -1.27
MCF2-205ENST00000437564 C3orf67Q6ZVT6 689 aa7.11□□□□□ -1.27
MCF2-205ENST00000437564 TAOK1Q7L7X3 1001 aa7.11□□□□□ -1.27
MCF2-205ENST00000437564 KRT27Q7Z3Y8 459 aa7.11□□□□□ -1.27
MCF2-205ENST00000437564 HDGFL2Q7Z4V5 671 aaPredicted RBP7.11□□□□□ -1.27
MCF2-205ENST00000437564 NOP9Q86U38 636 aaKnown RBP7.11□□□□□ -1.27
MCF2-205ENST00000437564 CAND1Q86VP6 1230 aaKnown RBP7.11□□□□□ -1.27
MCF2-205ENST00000437564 FLCNQ8NFG4 579 aa7.11□□□□□ -1.27
MCF2-205ENST00000437564 NPLOC4Q8TAT6 608 aa7.11□□□□□ -1.27
MCF2-205ENST00000437564 CEP95Q96GE4 821 aa7.11□□□□□ -1.27
MCF2-205ENST00000437564 HIC2Q96JB3 615 aa7.11□□□□□ -1.27
MCF2-205ENST00000437564 MOGAT1Q96PD6 335 aa7.11□□□□□ -1.27
MCF2-205ENST00000437564 PRAM1Q96QH2 718 aa7.11□□□□□ -1.27
MCF2-205ENST00000437564 SH3GL2Q99962 352 aa7.11□□□□□ -1.27
MCF2-205ENST00000437564 SIKE1Q9BRV8 207 aa7.11□□□□□ -1.27
MCF2-205ENST00000437564 CARD9Q9H257 536 aa7.11□□□□□ -1.27
MCF2-205ENST00000437564 DNAJC18Q9H819 358 aa7.11□□□□□ -1.27
MCF2-205ENST00000437564 SEPT11Q9NVA2 429 aaKnown RBP7.11□□□□□ -1.27
MCF2-205ENST00000437564 CLIC5Q9NZA1 410 aa7.11□□□□□ -1.27
MCF2-205ENST00000437564 EXOC7Q9UPT5 735 aa7.11□□□□□ -1.27
MCF2-205ENST00000437564 AK9Q5TCS8 1911 aa7.11□□□□□ -1.27
MCF2-205ENST00000437564 EPRSP07814 1512 aaKnown RBP7.1□□□□□ -1.27
MCF2-205ENST00000437564 CFAP73A6NFT4 308 aa7.1□□□□□ -1.27
MCF2-205ENST00000437564 AP3B1O00203 1094 aa7.1□□□□□ -1.27
MCF2-205ENST00000437564 MATN2O00339 956 aa7.1□□□□□ -1.27
MCF2-205ENST00000437564 PRPF3O43395 683 aaKnown RBP7.1□□□□□ -1.27
MCF2-205ENST00000437564 URI1O94763 535 aaPredicted RBP7.1□□□□□ -1.27
MCF2-205ENST00000437564 ALAS1P13196 640 aa7.1□□□□□ -1.27
MCF2-205ENST00000437564 ALADP13716 330 aa7.1□□□□□ -1.27
MCF2-205ENST00000437564 CES1P23141 567 aa7.1□□□□□ -1.27
MCF2-205ENST00000437564 LIFRP42702 1097 aa7.1□□□□□ -1.27
MCF2-205ENST00000437564 NFE2L1Q14494 772 aa7.1□□□□□ -1.27
MCF2-205ENST00000437564 MAP3K11Q16584 847 aa7.1□□□□□ -1.27
MCF2-205ENST00000437564 EGFLAMQ63HQ2 1017 aa7.1□□□□□ -1.27
MCF2-205ENST00000437564 FCRLBQ6BAA4 426 aa7.1□□□□□ -1.27
MCF2-205ENST00000437564 C6orf89Q6UWU4 347 aa7.1□□□□□ -1.27
MCF2-205ENST00000437564 METTL3Q86U44 580 aaKnown RBP7.1□□□□□ -1.27
MCF2-205ENST00000437564 SCUBE1Q8IWY4 988 aa7.1□□□□□ -1.27
MCF2-205ENST00000437564 RHOT2Q8IXI1 618 aa7.1□□□□□ -1.27
MCF2-205ENST00000437564 CHPFQ8IZ52 775 aa7.1□□□□□ -1.27
MCF2-205ENST00000437564 AADATQ8N5Z0 425 aa7.1□□□□□ -1.27
MCF2-205ENST00000437564 IGSF22Q8N9C0 903 aa7.1□□□□□ -1.27
MCF2-205ENST00000437564 CNBD1Q8NA66 436 aa7.1□□□□□ -1.27
MCF2-205ENST00000437564 GIMAP8Q8ND71 665 aaPredicted RBP7.1□□□□□ -1.27
MCF2-205ENST00000437564 SCG3Q8WXD2 468 aaKnown RBP7.1□□□□□ -1.27
MCF2-205ENST00000437564 PTPRN2Q92932 1015 aa7.1□□□□□ -1.27
MCF2-205ENST00000437564 OSBP2Q969R2 916 aa7.1□□□□□ -1.27
MCF2-205ENST00000437564 AZIN2Q96A70 460 aa7.1□□□□□ -1.27
MCF2-205ENST00000437564 NRBF2Q96F24 287 aa7.1□□□□□ -1.27
MCF2-205ENST00000437564 IFT43Q96FT9 208 aa7.1□□□□□ -1.27
MCF2-205ENST00000437564 ANKRD36BP1Q96IX9 119 aa7.1□□□□□ -1.27
MCF2-205ENST00000437564 SAMD11Q96NU1 681 aa7.1□□□□□ -1.27
MCF2-205ENST00000437564 RBM14Q96PK6 669 aaKnown RBP7.1□□□□□ -1.27
MCF2-205ENST00000437564 HAPLN3Q96S86 360 aa7.1□□□□□ -1.27
MCF2-205ENST00000437564 SETDB2Q96T68 719 aa7.1□□□□□ -1.27
MCF2-205ENST00000437564 FAM129AQ9BZQ8 928 aa7.1□□□□□ -1.27
MCF2-205ENST00000437564 TRIM17Q9Y577 477 aa7.1□□□□□ -1.27
MCF2-205ENST00000437564 NR2E3Q9Y5X4 410 aa7.1□□□□□ -1.27
MCF2-205ENST00000437564 PARP3Q9Y6F1 533 aa7.1□□□□□ -1.27
MCF2-205ENST00000437564 GRIN2DO15399 1336 aa7.1□□□□□ -1.27
MCF2-205ENST00000437564 CLASP1Q7Z460 1538 aa7.1□□□□□ -1.27
MCF2-205ENST00000437564 KANSL1LA0AUZ9 987 aa7.09□□□□□ -1.27
MCF2-205ENST00000437564 TRIM64A6NGJ6 449 aa7.09□□□□□ -1.27
MCF2-205ENST00000437564 TRIM64BA6NI03 449 aa7.09□□□□□ -1.27
MCF2-205ENST00000437564 CCDC69A6NI79 296 aa7.09□□□□□ -1.27
MCF2-205ENST00000437564 KIF28PB7ZC32 967 aa7.09□□□□□ -1.27
MCF2-205ENST00000437564 GOLGA8KD6RF30 607 aa7.09□□□□□ -1.27
MCF2-205ENST00000437564 GOLGA8TH3BQL2 631 aa7.09□□□□□ -1.27
MCF2-205ENST00000437564 YKT6O15498 198 aa7.09□□□□□ -1.27
MCF2-205ENST00000437564 STRNO43815 780 aa7.09□□□□□ -1.27
MCF2-205ENST00000437564 CBFA2T3O75081 653 aa7.09□□□□□ -1.27
MCF2-205ENST00000437564 ZC3H11AO75152 810 aaKnown RBP eCLIP7.09□□□□□ -1.27
MCF2-205ENST00000437564 SYF2O95926 243 aaKnown RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms