RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 ITGA1P56199 1179 aa5.61□□□□□ -1.51
HMGB1P31-201ENST00000437242 TMCO4Q5TGY1 634 aa5.61□□□□□ -1.51
HMGB1P31-201ENST00000437242 C9orf131Q5VYM1 1079 aa5.61□□□□□ -1.51
HMGB1P31-201ENST00000437242 STK32CQ86UX6 486 aa5.61□□□□□ -1.51
HMGB1P31-201ENST00000437242 FAM126BQ8IXS8 530 aa5.61□□□□□ -1.51
HMGB1P31-201ENST00000437242 ZNF513Q8N8E2 541 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P31-201ENST00000437242 TXNDC5Q8NBS9 432 aaKnown RBP5.61□□□□□ -1.51
HMGB1P31-201ENST00000437242 BVESQ8NE79 360 aa5.61□□□□□ -1.51
HMGB1P31-201ENST00000437242 SHDQ96IW2 340 aa5.61□□□□□ -1.51
HMGB1P31-201ENST00000437242 APBA2Q99767 749 aa5.61□□□□□ -1.51
HMGB1P31-201ENST00000437242 C1QTNF3Q9BXJ4 246 aa5.61□□□□□ -1.51
HMGB1P31-201ENST00000437242 AKAP8O43823 692 aaKnown RBP5.6□□□□□ -1.51
HMGB1P31-201ENST00000437242 ZNF143P52747 638 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P31-201ENST00000437242 CASP7P55210 303 aa5.6□□□□□ -1.51
HMGB1P31-201ENST00000437242 RPL11P62913 178 aaKnown RBP5.6□□□□□ -1.51
HMGB1P31-201ENST00000437242 MROH9Q5TGP6 573 aa5.6□□□□□ -1.51
HMGB1P31-201ENST00000437242 GTF2IRD2BQ6EKJ0 949 aa5.6□□□□□ -1.51
HMGB1P31-201ENST00000437242 GLB1LQ6UWU2 654 aa5.6□□□□□ -1.51
HMGB1P31-201ENST00000437242 MILR1Q7Z6M3 343 aa5.6□□□□□ -1.51
HMGB1P31-201ENST00000437242 GTF2IRD2Q86UP8 949 aa5.6□□□□□ -1.51
HMGB1P31-201ENST00000437242 TRIM59Q8IWR1 403 aa5.6□□□□□ -1.51
HMGB1P31-201ENST00000437242 NGRNQ9NPE2 291 aaKnown RBP5.6□□□□□ -1.51
HMGB1P31-201ENST00000437242 SRRDQ9UH36 339 aa5.6□□□□□ -1.51
HMGB1P31-201ENST00000437242 DDX3XO00571 662 aaKnown RBP eCLIP5.59□□□□□ -1.51
HMGB1P31-201ENST00000437242 FPR2P25090 351 aa5.59□□□□□ -1.51
HMGB1P31-201ENST00000437242 STAT5AP42229 794 aa5.59□□□□□ -1.51
HMGB1P31-201ENST00000437242 INF2Q27J81 1249 aa5.59□□□□□ -1.51
HMGB1P31-201ENST00000437242 PRAMEF18Q5VWM3 479 aa5.59□□□□□ -1.51
HMGB1P31-201ENST00000437242 METTL16Q86W50 562 aaKnown RBP5.59□□□□□ -1.51
HMGB1P31-201ENST00000437242 RIOX2Q8IUF8 465 aa5.59□□□□□ -1.51
HMGB1P31-201ENST00000437242 DVL3Q92997 716 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P31-201ENST00000437242 LCORQ96JN0 433 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P31-201ENST00000437242 KRTAP17-1Q9BYP8 105 aa5.59□□□□□ -1.51
HMGB1P31-201ENST00000437242 CYP26B1Q9NR63 512 aa5.59□□□□□ -1.51
HMGB1P31-201ENST00000437242 MYO1BO43795 1136 aa5.58□□□□□ -1.52
HMGB1P31-201ENST00000437242 GJA8P48165 433 aa5.58□□□□□ -1.52
HMGB1P31-201ENST00000437242 NKX3-2P78367 333 aa5.58□□□□□ -1.52
HMGB1P31-201ENST00000437242 SURF1Q15526 300 aa5.58□□□□□ -1.52
HMGB1P31-201ENST00000437242 PRR31Q5SQ13 230 aa5.58□□□□□ -1.52
HMGB1P31-201ENST00000437242 IQCEQ6IPM2 695 aa5.58□□□□□ -1.52
HMGB1P31-201ENST00000437242 PLEKHH3Q7Z736 793 aa5.58□□□□□ -1.52
HMGB1P31-201ENST00000437242 FRS2Q8WU20 508 aa5.58□□□□□ -1.52
HMGB1P31-201ENST00000437242 KISS1RQ969F8 398 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P31-201ENST00000437242 TRMT2BQ96GJ1 504 aaKnown RBP5.58□□□□□ -1.52
HMGB1P31-201ENST00000437242 NKX2-4Q9H2Z4 354 aa5.58□□□□□ -1.52
HMGB1P31-201ENST00000437242 ST6GALNAC2Q9UJ37 374 aa5.58□□□□□ -1.52
HMGB1P31-201ENST00000437242 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P31-201ENST00000437242 COA3Q9Y2R0 106 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P31-201ENST00000437242 TIMM13Q9Y5L4 95 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P31-201ENST00000437242 C9orf118A6NHY6 69 aa5.57□□□□□ -1.52
HMGB1P31-201ENST00000437242 LAMTOR5O43504 91 aa5.57□□□□□ -1.52
HMGB1P31-201ENST00000437242 CYP1A1P04798 512 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P31-201ENST00000437242 VAMP1P23763 118 aa5.57□□□□□ -1.52
HMGB1P31-201ENST00000437242 GTF2A2P52657 109 aa5.57□□□□□ -1.52
HMGB1P31-201ENST00000437242 NCAPHQ15003 741 aa5.57□□□□□ -1.52
HMGB1P31-201ENST00000437242 E4F1Q66K89 784 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P31-201ENST00000437242 CEP68Q76N32 757 aa5.57□□□□□ -1.52
HMGB1P31-201ENST00000437242 LIMS2Q7Z4I7 341 aa5.57□□□□□ -1.52
HMGB1P31-201ENST00000437242 FAM169BQ8N8A8 192 aa5.57□□□□□ -1.52
HMGB1P31-201ENST00000437242 NPLOC4Q8TAT6 608 aa5.57□□□□□ -1.52
HMGB1P31-201ENST00000437242 DIO2Q92813 273 aa5.57□□□□□ -1.52
HMGB1P31-201ENST00000437242 STRIP2Q9ULQ0 834 aa5.57□□□□□ -1.52
HMGB1P31-201ENST00000437242 FSHBP01225 129 aa5.56□□□□□ -1.52
HMGB1P31-201ENST00000437242 ZNF28P17035 718 aa5.56□□□□□ -1.52
HMGB1P31-201ENST00000437242 KCNAB2Q13303 367 aa5.56□□□□□ -1.52
HMGB1P31-201ENST00000437242 ADAM9Q13443 819 aa5.56□□□□□ -1.52
HMGB1P31-201ENST00000437242 CHRNA2Q15822 529 aa5.56□□□□□ -1.52
HMGB1P31-201ENST00000437242 CR1LQ2VPA4 569 aa5.56□□□□□ -1.52
HMGB1P31-201ENST00000437242 NLRP10Q86W26 655 aa5.56□□□□□ -1.52
HMGB1P31-201ENST00000437242 NT5DC4Q86YG4 428 aa5.56□□□□□ -1.52
HMGB1P31-201ENST00000437242 Q8N1Y9 231 aa5.56□□□□□ -1.52
HMGB1P31-201ENST00000437242 SLC16A11Q8NCK7 471 aa5.56□□□□□ -1.52
HMGB1P31-201ENST00000437242 BTN2A2Q8WVV5 523 aa5.56□□□□□ -1.52
HMGB1P31-201ENST00000437242 ANAPC16Q96DE5 110 aa5.56□□□□□ -1.52
HMGB1P31-201ENST00000437242 TMEM169Q96HH4 297 aa5.56□□□□□ -1.52
HMGB1P31-201ENST00000437242 SEC16BQ96JE7 1060 aa5.56□□□□□ -1.52
HMGB1P31-201ENST00000437242 MRGPRX3Q96LB0 322 aa5.56□□□□□ -1.52
HMGB1P31-201ENST00000437242 ZSWIM3Q96MP5 696 aa5.56□□□□□ -1.52
HMGB1P31-201ENST00000437242 SSBP3Q9BWW4 388 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P31-201ENST00000437242 LGR4Q9BXB1 951 aa5.56□□□□□ -1.52
HMGB1P31-201ENST00000437242 L2HGDHQ9H9P8 463 aa5.56□□□□□ -1.52
HMGB1P31-201ENST00000437242 ZNF652Q9Y2D9 606 aa5.56□□□□□ -1.52
HMGB1P31-201ENST00000437242 X6R8D5 127 aa5.56□□□□□ -1.52
HMGB1P31-201ENST00000437242 MEFVO15553 781 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P31-201ENST00000437242 SNRPB2P08579 225 aaKnown RBP5.55□□□□□ -1.52
HMGB1P31-201ENST00000437242 C6P13671 934 aa5.55□□□□□ -1.52
HMGB1P31-201ENST00000437242 BCL6P41182 706 aa5.55□□□□□ -1.52
HMGB1P31-201ENST00000437242 CLIC6Q96NY7 704 aa5.55□□□□□ -1.52
HMGB1P31-201ENST00000437242 B4GALT3O60512 393 aa5.54□□□□□ -1.52
HMGB1P31-201ENST00000437242 ECI1P42126 302 aa5.54□□□□□ -1.52
HMGB1P31-201ENST00000437242 CYP4F3Q08477 520 aa5.54□□□□□ -1.52
HMGB1P31-201ENST00000437242 CCDC103Q8IW40 242 aa5.54□□□□□ -1.52
HMGB1P31-201ENST00000437242 SH3RF3Q8TEJ3 882 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P31-201ENST00000437242 TOE1Q96GM8 510 aaKnown RBP5.54□□□□□ -1.52
HMGB1P31-201ENST00000437242 WRNIP1Q96S55 665 aa5.54□□□□□ -1.52
HMGB1P31-201ENST00000437242 TMEM168Q9H0V1 697 aa5.54□□□□□ -1.52
HMGB1P31-201ENST00000437242 DTLQ9NZJ0 730 aa5.54□□□□□ -1.52
HMGB1P31-201ENST00000437242 TSC22D4Q9Y3Q8 395 aa5.54□□□□□ -1.52
HMGB1P31-201ENST00000437242 PCDHB4Q9Y5E5 795 aa5.54□□□□□ -1.52
HMGB1P31-201ENST00000437242 NPEPPSL1A6NEC2 478 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms