RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 CCDC62Q6P9F0 684 aa17.4■□□□□ 0.38
HDAC8-213ENST00000436675 GJD3Q8N144 294 aa17.4■□□□□ 0.38
HDAC8-213ENST00000436675 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.4■□□□□ 0.38
HDAC8-213ENST00000436675 TAAR1Q96RJ0 339 aa17.4■□□□□ 0.38
HDAC8-213ENST00000436675 HDAC6Q9UBN7 1215 aa17.4■□□□□ 0.38
HDAC8-213ENST00000436675 MYH6P13533 1939 aa17.4■□□□□ 0.38
HDAC8-213ENST00000436675 IL9P15248 144 aa17.39■□□□□ 0.37
HDAC8-213ENST00000436675 HAND2P61296 217 aa17.39■□□□□ 0.37
HDAC8-213ENST00000436675 FAM178BQ8IXR5 827 aa17.39■□□□□ 0.37
HDAC8-213ENST00000436675 C7orf31Q8N865 590 aa17.39■□□□□ 0.37
HDAC8-213ENST00000436675 C17orf80Q9BSJ5 609 aa17.39■□□□□ 0.37
HDAC8-213ENST00000436675 UBA5Q9GZZ9 404 aa17.39■□□□□ 0.37
HDAC8-213ENST00000436675 MYO7AQ13402 2215 aa17.39■□□□□ 0.37
HDAC8-213ENST00000436675 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.38■□□□□ 0.37
HDAC8-213ENST00000436675 ABHD14A-ACY1A0A1B0GW23 586 aa17.38■□□□□ 0.37
HDAC8-213ENST00000436675 SORBS3O60504 671 aa17.38■□□□□ 0.37
HDAC8-213ENST00000436675 FGAP02671 866 aa17.38■□□□□ 0.37
HDAC8-213ENST00000436675 CXCL10P02778 98 aa17.38■□□□□ 0.37
HDAC8-213ENST00000436675 FGRP09769 529 aa17.38■□□□□ 0.37
HDAC8-213ENST00000436675 MX1P20591 662 aa17.38■□□□□ 0.37
HDAC8-213ENST00000436675 CASTP20810 708 aaKnown RBP17.38■□□□□ 0.37
HDAC8-213ENST00000436675 PSEN2P49810 448 aa17.38■□□□□ 0.37
HDAC8-213ENST00000436675 ZNF200P98182 395 aaPredicted RBP17.38■□□□□ 0.37
HDAC8-213ENST00000436675 IKBKEQ14164 716 aa17.38■□□□□ 0.37
HDAC8-213ENST00000436675 LEXMQ3ZCV2 418 aa17.38■□□□□ 0.37
HDAC8-213ENST00000436675 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.38■□□□□ 0.37
HDAC8-213ENST00000436675 SESTD1Q86VW0 696 aa17.38■□□□□ 0.37
HDAC8-213ENST00000436675 FBXO22Q8NEZ5 403 aa17.38■□□□□ 0.37
HDAC8-213ENST00000436675 WNT8BQ93098 351 aa17.38■□□□□ 0.37
HDAC8-213ENST00000436675 GTF2IRD1Q9UHL9 959 aa17.38■□□□□ 0.37
HDAC8-213ENST00000436675 PNMA2Q9UL42 364 aa17.38■□□□□ 0.37
HDAC8-213ENST00000436675 WDR19Q8NEZ3 1342 aa17.38■□□□□ 0.37
HDAC8-213ENST00000436675 MICAL3Q7RTP6 2002 aa17.37■□□□□ 0.37
HDAC8-213ENST00000436675 ZNF286BP0CG31 522 aa17.37■□□□□ 0.37
HDAC8-213ENST00000436675 ALX1Q15699 326 aa17.37■□□□□ 0.37
HDAC8-213ENST00000436675 ZNF618Q5T7W0 954 aa17.37■□□□□ 0.37
HDAC8-213ENST00000436675 PTCRAQ6ISU1 281 aaPredicted RBP17.37■□□□□ 0.37
HDAC8-213ENST00000436675 EP400NLQ6ZTU2 488 aa17.37■□□□□ 0.37
HDAC8-213ENST00000436675 ZKSCAN3Q9BRR0 538 aa17.37■□□□□ 0.37
HDAC8-213ENST00000436675 TCP11L1Q9NUJ3 509 aa17.37■□□□□ 0.37
HDAC8-213ENST00000436675 COL20A1Q9P218 1284 aa17.37■□□□□ 0.37
HDAC8-213ENST00000436675 H3BQ06 376 aaPredicted RBP17.36■□□□□ 0.37
HDAC8-213ENST00000436675 MBTPS1Q14703 1052 aa17.36■□□□□ 0.37
HDAC8-213ENST00000436675 MFSD10Q14728 455 aa17.36■□□□□ 0.37
HDAC8-213ENST00000436675 DGKDQ16760 1214 aa17.36■□□□□ 0.37
HDAC8-213ENST00000436675 KIAA0753Q2KHM9 967 aa17.36■□□□□ 0.37
HDAC8-213ENST00000436675 MYOCDQ8IZQ8 938 aa17.36■□□□□ 0.37
HDAC8-213ENST00000436675 SYTL5Q8TDW5 730 aaPredicted RBP17.36■□□□□ 0.37
HDAC8-213ENST00000436675 FAM227BQ96M60 508 aa17.36■□□□□ 0.37
HDAC8-213ENST00000436675 PRR33A8MZF0 331 aa17.35■□□□□ 0.37
HDAC8-213ENST00000436675 PARNO95453 639 aaKnown RBP17.35■□□□□ 0.37
HDAC8-213ENST00000436675 EIF2AK2P19525 551 aaKnown RBP17.35■□□□□ 0.37
HDAC8-213ENST00000436675 RBL2Q08999 1139 aa17.35■□□□□ 0.37
HDAC8-213ENST00000436675 PTK7Q13308 1070 aa17.35■□□□□ 0.37
HDAC8-213ENST00000436675 STXBP2Q15833 593 aa17.35■□□□□ 0.37
HDAC8-213ENST00000436675 CDC37Q16543 378 aaPredicted RBP17.35■□□□□ 0.37
HDAC8-213ENST00000436675 TRIM71Q2Q1W2 868 aaKnown RBP17.35■□□□□ 0.37
HDAC8-213ENST00000436675 TRAF7Q6Q0C0 670 aa17.35■□□□□ 0.37
HDAC8-213ENST00000436675 NSUN6Q8TEA1 469 aaKnown RBP17.35■□□□□ 0.37
HDAC8-213ENST00000436675 RMDN3Q96TC7 470 aa17.35■□□□□ 0.37
HDAC8-213ENST00000436675 DDX41Q9UJV9 622 aaKnown RBP17.35■□□□□ 0.37
HDAC8-213ENST00000436675 PCDHB15Q9Y5E8 787 aa17.35■□□□□ 0.37
HDAC8-213ENST00000436675 TRIOO75962 3097 aa17.34■□□□□ 0.37
HDAC8-213ENST00000436675 A0A0D9SFI3 127 aa17.34■□□□□ 0.37
HDAC8-213ENST00000436675 EFCAB14O75071 495 aa17.34■□□□□ 0.37
HDAC8-213ENST00000436675 LGR5O75473 907 aa17.34■□□□□ 0.37
HDAC8-213ENST00000436675 SNHG28P0DPA3 235 aa17.34■□□□□ 0.37
HDAC8-213ENST00000436675 HIC1Q14526 733 aa17.34■□□□□ 0.37
HDAC8-213ENST00000436675 CSPP1Q1MSJ5 1256 aa17.34■□□□□ 0.37
HDAC8-213ENST00000436675 ARHGEF16Q5VV41 709 aa17.34■□□□□ 0.37
HDAC8-213ENST00000436675 WDFY4Q6ZS81 3184 aa17.34■□□□□ 0.37
HDAC8-213ENST00000436675 NLRC5Q86WI3 1866 aa17.34■□□□□ 0.37
HDAC8-213ENST00000436675 DHX37Q8IY37 1157 aaKnown RBP17.34■□□□□ 0.37
HDAC8-213ENST00000436675 RGS22Q8NE09 1264 aa17.34■□□□□ 0.37
HDAC8-213ENST00000436675 HELLSQ9NRZ9 838 aa17.34■□□□□ 0.37
HDAC8-213ENST00000436675 INSL6Q9Y581 213 aa17.34■□□□□ 0.37
HDAC8-213ENST00000436675 MRVI1Q9Y6F6 885 aa17.34■□□□□ 0.37
HDAC8-213ENST00000436675 ABCB11O95342 1321 aa17.33■□□□□ 0.36
HDAC8-213ENST00000436675 GRXCR2A6NFK2 248 aa17.33■□□□□ 0.36
HDAC8-213ENST00000436675 HSPD1P10809 573 aaKnown RBP17.33■□□□□ 0.36
HDAC8-213ENST00000436675 MFSD6Q6ZSS7 791 aa17.33■□□□□ 0.36
HDAC8-213ENST00000436675 TBC1D10CQ8IV04 446 aa17.33■□□□□ 0.36
HDAC8-213ENST00000436675 DBF4BQ8NFT6 615 aa17.33■□□□□ 0.36
HDAC8-213ENST00000436675 EVI5LQ96CN4 794 aa17.33■□□□□ 0.36
HDAC8-213ENST00000436675 TTC14Q96N46 770 aa17.33■□□□□ 0.36
HDAC8-213ENST00000436675 VAT1LQ9HCJ6 419 aa17.33■□□□□ 0.36
HDAC8-213ENST00000436675 C5orf42Q9H799 3197 aa17.33■□□□□ 0.36
HDAC8-213ENST00000436675 DHX16O60231 1041 aaKnown RBP17.32■□□□□ 0.36
HDAC8-213ENST00000436675 UPP2O95045 317 aa17.32■□□□□ 0.36
HDAC8-213ENST00000436675 AMHP03971 560 aa17.32■□□□□ 0.36
HDAC8-213ENST00000436675 ALADP13716 330 aa17.32■□□□□ 0.36
HDAC8-213ENST00000436675 THPOP40225 353 aa17.32■□□□□ 0.36
HDAC8-213ENST00000436675 LAMC2Q13753 1193 aa17.32■□□□□ 0.36
HDAC8-213ENST00000436675 MCMDC2Q4G0Z9 681 aa17.32■□□□□ 0.36
HDAC8-213ENST00000436675 EPC2Q52LR7 807 aa17.32■□□□□ 0.36
HDAC8-213ENST00000436675 GPATCH4Q5T3I0 446 aaKnown RBP17.32■□□□□ 0.36
HDAC8-213ENST00000436675 ZNF589Q86UQ0 364 aaPredicted RBP17.32■□□□□ 0.36
HDAC8-213ENST00000436675 ADGRF4Q8IZF3 695 aa17.32■□□□□ 0.36
HDAC8-213ENST00000436675 MRPL38Q96DV4 380 aaKnown RBP17.32■□□□□ 0.36
HDAC8-213ENST00000436675 IWS1Q96ST2 819 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms