RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 CSF2RAP15509 400 aa12.62□□□□□ -0.39
HMGCL-204ENST00000436439 GJB2P29033 226 aa12.62□□□□□ -0.39
HMGCL-204ENST00000436439 ALDH5A1P51649 535 aaPredicted RBP12.62□□□□□ -0.39
HMGCL-204ENST00000436439 CCT2P78371 535 aaKnown RBP12.62□□□□□ -0.39
HMGCL-204ENST00000436439 NUCB2P80303 420 aa12.62□□□□□ -0.39
HMGCL-204ENST00000436439 NTRK3Q16288 839 aa12.62□□□□□ -0.39
HMGCL-204ENST00000436439 TMEM240Q5SV17 173 aa12.62□□□□□ -0.39
HMGCL-204ENST00000436439 SLC30A10Q6XR72 485 aa12.62□□□□□ -0.39
HMGCL-204ENST00000436439 MICU3Q86XE3 530 aa12.62□□□□□ -0.39
HMGCL-204ENST00000436439 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.62□□□□□ -0.39
HMGCL-204ENST00000436439 FANCBQ8NB91 859 aa12.62□□□□□ -0.39
HMGCL-204ENST00000436439 PNMA1Q8ND90 353 aa12.62□□□□□ -0.39
HMGCL-204ENST00000436439 KAT14Q9H8E8 782 aa12.62□□□□□ -0.39
HMGCL-204ENST00000436439 NCOA5Q9HCD5 579 aaKnown RBP12.62□□□□□ -0.39
HMGCL-204ENST00000436439 RBM28Q9NW13 759 aaKnown RBP12.62□□□□□ -0.39
HMGCL-204ENST00000436439 NAP1L2Q9ULW6 460 aaPredicted RBP12.62□□□□□ -0.39
HMGCL-204ENST00000436439 A0A0C4DFX4 3053 aa12.62□□□□□ -0.39
HMGCL-204ENST00000436439 UMODL1Q5DID0 1318 aa12.62□□□□□ -0.39
HMGCL-204ENST00000436439 MYH15Q9Y2K3 1946 aa12.62□□□□□ -0.39
HMGCL-204ENST00000436439 DDX11L8A8MPP1 907 aa12.61□□□□□ -0.39
HMGCL-204ENST00000436439 SNHG28P0DPA3 235 aa12.61□□□□□ -0.39
HMGCL-204ENST00000436439 ACRP10323 421 aa12.61□□□□□ -0.39
HMGCL-204ENST00000436439 PTMSP20962 102 aa12.61□□□□□ -0.39
HMGCL-204ENST00000436439 CDC27P30260 824 aa12.61□□□□□ -0.39
HMGCL-204ENST00000436439 CYP2C18P33260 490 aa12.61□□□□□ -0.39
HMGCL-204ENST00000436439 MCM4P33991 863 aa12.61□□□□□ -0.39
HMGCL-204ENST00000436439 ZNF543Q08ER8 600 aa12.61□□□□□ -0.39
HMGCL-204ENST00000436439 SCN5AQ14524 2016 aa12.61□□□□□ -0.39
HMGCL-204ENST00000436439 FSCN1Q16658 493 aaKnown RBP12.61□□□□□ -0.39
HMGCL-204ENST00000436439 RTN1Q16799 776 aa12.61□□□□□ -0.39
HMGCL-204ENST00000436439 IQSEC1Q6DN90 963 aa12.61□□□□□ -0.39
HMGCL-204ENST00000436439 CPLX2Q6PUV4 134 aaKnown RBP12.61□□□□□ -0.39
HMGCL-204ENST00000436439 CLEC4DQ8WXI8 215 aa12.61□□□□□ -0.39
HMGCL-204ENST00000436439 KIF3AQ9Y496 699 aa12.61□□□□□ -0.39
HMGCL-204ENST00000436439 PRUNE2Q8WUY3 3088 aa12.6□□□□□ -0.39
HMGCL-204ENST00000436439 KIAA1217Q5T5P2 1943 aa12.6□□□□□ -0.39
HMGCL-204ENST00000436439 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.6□□□□□ -0.39
HMGCL-204ENST00000436439 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.6□□□□□ -0.39
HMGCL-204ENST00000436439 PTPDC1A2A3K4 754 aa12.6□□□□□ -0.39
HMGCL-204ENST00000436439 GRXCR1A8MXD5 290 aa12.6□□□□□ -0.39
HMGCL-204ENST00000436439 CPLX1O14810 134 aa12.6□□□□□ -0.39
HMGCL-204ENST00000436439 TLR3O15455 904 aaKnown RBP12.6□□□□□ -0.39
HMGCL-204ENST00000436439 IFNAR1P17181 557 aa12.6□□□□□ -0.39
HMGCL-204ENST00000436439 PDCP20941 246 aa12.6□□□□□ -0.39
HMGCL-204ENST00000436439 DNAJB2P25686 324 aa12.6□□□□□ -0.39
HMGCL-204ENST00000436439 ADD1P35611 737 aaKnown RBP12.6□□□□□ -0.39
HMGCL-204ENST00000436439 PSMC6P62333 389 aa12.6□□□□□ -0.39
HMGCL-204ENST00000436439 PPIGQ13427 754 aaKnown RBP eCLIP12.6□□□□□ -0.39
HMGCL-204ENST00000436439 ITGA7Q13683 1181 aa12.6□□□□□ -0.39
HMGCL-204ENST00000436439 GSE1Q14687 1217 aa12.6□□□□□ -0.39
HMGCL-204ENST00000436439 RASIP1Q5U651 963 aa12.6□□□□□ -0.39
HMGCL-204ENST00000436439 MAFAQ8NHW3 353 aaPredicted RBP12.6□□□□□ -0.39
HMGCL-204ENST00000436439 GBP4Q96PP9 640 aa12.6□□□□□ -0.39
HMGCL-204ENST00000436439 MYL10Q9BUA6 226 aa12.6□□□□□ -0.39
HMGCL-204ENST00000436439 COL25A1Q9BXS0 654 aaPredicted RBP12.6□□□□□ -0.39
HMGCL-204ENST00000436439 AP5M1Q9H0R1 490 aa12.6□□□□□ -0.39
HMGCL-204ENST00000436439 CPVLQ9H3G5 476 aa12.6□□□□□ -0.39
HMGCL-204ENST00000436439 VTA1Q9NP79 307 aa12.6□□□□□ -0.39
HMGCL-204ENST00000436439 STK36Q9NRP7 1315 aa12.6□□□□□ -0.39
HMGCL-204ENST00000436439 B4GALT4O60513 344 aa12.59□□□□□ -0.39
HMGCL-204ENST00000436439 GOLGA8HP0CJ92 632 aa12.59□□□□□ -0.39
HMGCL-204ENST00000436439 CALML3P27482 149 aa12.59□□□□□ -0.39
HMGCL-204ENST00000436439 KIF5BP33176 963 aa12.59□□□□□ -0.39
HMGCL-204ENST00000436439 PBX2P40425 430 aa12.59□□□□□ -0.39
HMGCL-204ENST00000436439 GRM4Q14833 912 aa12.59□□□□□ -0.39
HMGCL-204ENST00000436439 GRIN2CQ14957 1233 aa12.59□□□□□ -0.39
HMGCL-204ENST00000436439 ZNF365Q70YC5 407 aa12.59□□□□□ -0.39
HMGCL-204ENST00000436439 TMEM199Q8N511 208 aa12.59□□□□□ -0.39
HMGCL-204ENST00000436439 TRPV6Q9H1D0 765 aa12.59□□□□□ -0.39
HMGCL-204ENST00000436439 Q9Y3F1 56 aa12.59□□□□□ -0.39
HMGCL-204ENST00000436439 SCN10AQ9Y5Y9 1956 aa12.59□□□□□ -0.39
HMGCL-204ENST00000436439 TMEM265A0A087WTH1 108 aa12.58□□□□□ -0.4
HMGCL-204ENST00000436439 JAK2O60674 1132 aa12.58□□□□□ -0.4
HMGCL-204ENST00000436439 CABYRO75952 493 aa12.58□□□□□ -0.4
HMGCL-204ENST00000436439 BRD1O95696 1058 aa12.58□□□□□ -0.4
HMGCL-204ENST00000436439 FDPSP14324 419 aaKnown RBP12.58□□□□□ -0.4
HMGCL-204ENST00000436439 FOSL2P15408 326 aa12.58□□□□□ -0.4
HMGCL-204ENST00000436439 RXRAP19793 462 aa12.58□□□□□ -0.4
HMGCL-204ENST00000436439 SYT1P21579 422 aa12.58□□□□□ -0.4
HMGCL-204ENST00000436439 GNAQP50148 359 aa12.58□□□□□ -0.4
HMGCL-204ENST00000436439 RPS6P62753 249 aaKnown RBP12.58□□□□□ -0.4
HMGCL-204ENST00000436439 FUT2Q10981 343 aa12.58□□□□□ -0.4
HMGCL-204ENST00000436439 DUSP28Q4G0W2 176 aa12.58□□□□□ -0.4
HMGCL-204ENST00000436439 CLEC17AQ6ZS10 378 aa12.58□□□□□ -0.4
HMGCL-204ENST00000436439 CTCFLQ8NI51 663 aaPredicted RBP12.58□□□□□ -0.4
HMGCL-204ENST00000436439 PBX4Q9BYU1 374 aa12.58□□□□□ -0.4
HMGCL-204ENST00000436439 WDR11Q9BZH6 1224 aa12.58□□□□□ -0.4
HMGCL-204ENST00000436439 UBA5Q9GZZ9 404 aa12.58□□□□□ -0.4
HMGCL-204ENST00000436439 HIPK3Q9H422 1215 aa12.58□□□□□ -0.4
HMGCL-204ENST00000436439 ADD3Q9UEY8 706 aaKnown RBP12.58□□□□□ -0.4
HMGCL-204ENST00000436439 TANC1Q9C0D5 1861 aa12.58□□□□□ -0.4
HMGCL-204ENST00000436439 TCHHQ07283 1943 aa12.58□□□□□ -0.4
HMGCL-204ENST00000436439 RBM47A0AV96 593 aaKnown RBP12.57□□□□□ -0.4
HMGCL-204ENST00000436439 PALM3A6NDB9 673 aaPredicted RBP12.57□□□□□ -0.4
HMGCL-204ENST00000436439 STX6O43752 255 aa12.57□□□□□ -0.4
HMGCL-204ENST00000436439 ZEB2O60315 1214 aa12.57□□□□□ -0.4
HMGCL-204ENST00000436439 SMARCA1P28370 1054 aa12.57□□□□□ -0.4
HMGCL-204ENST00000436439 CCL23P55773 120 aa12.57□□□□□ -0.4
HMGCL-204ENST00000436439 USH1GQ495M9 461 aa12.57□□□□□ -0.4
HMGCL-204ENST00000436439 LARP1BQ659C4 914 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms