RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 CCDC93Q567U6 631 aa17.33■□□□□ 0.37
SCARF1-203ENST00000434376 CDKAL1Q5VV42 579 aa17.33■□□□□ 0.37
SCARF1-203ENST00000434376 TMED8Q6PL24 325 aaPredicted RBP17.33■□□□□ 0.37
SCARF1-203ENST00000434376 KSR1Q8IVT5 923 aa17.33■□□□□ 0.37
SCARF1-203ENST00000434376 LARGE2Q8N3Y3 721 aa17.33■□□□□ 0.37
SCARF1-203ENST00000434376 CRAMP1Q96RY5 1269 aa17.33■□□□□ 0.37
SCARF1-203ENST00000434376 SPZ1Q9BXG8 430 aa17.33■□□□□ 0.37
SCARF1-203ENST00000434376 TBX2Q13207 712 aaPredicted RBP17.33■□□□□ 0.36
SCARF1-203ENST00000434376 GRB10Q13322 594 aa17.33■□□□□ 0.36
SCARF1-203ENST00000434376 CC2D1AQ6P1N0 951 aaPredicted RBP17.33■□□□□ 0.36
SCARF1-203ENST00000434376 CNGA4Q8IV77 575 aa17.33■□□□□ 0.36
SCARF1-203ENST00000434376 CAGE1Q8TC20 777 aa17.33■□□□□ 0.36
SCARF1-203ENST00000434376 SMARCAL1Q9NZC9 954 aa17.33■□□□□ 0.36
SCARF1-203ENST00000434376 LCMT1Q9UIC8 334 aa17.33■□□□□ 0.36
SCARF1-203ENST00000434376 EFCAB8A8MWE9 144 aa17.32■□□□□ 0.36
SCARF1-203ENST00000434376 CLSTN1O94985 981 aa17.32■□□□□ 0.36
SCARF1-203ENST00000434376 PDE6BP35913 854 aa17.32■□□□□ 0.36
SCARF1-203ENST00000434376 MRPL12P52815 198 aaKnown RBP17.32■□□□□ 0.36
SCARF1-203ENST00000434376 FAM193AP78312 1265 aa17.32■□□□□ 0.36
SCARF1-203ENST00000434376 ABCB5Q2M3G0 1257 aa17.32■□□□□ 0.36
SCARF1-203ENST00000434376 CACNA2D4Q7Z3S7 1137 aa17.32■□□□□ 0.36
SCARF1-203ENST00000434376 RDH13Q8NBN7 331 aa17.32■□□□□ 0.36
SCARF1-203ENST00000434376 KIAA0895Q8NCT3 520 aa17.32■□□□□ 0.36
SCARF1-203ENST00000434376 P2RX5Q93086 422 aa17.32■□□□□ 0.36
SCARF1-203ENST00000434376 MASTLQ96GX5 879 aa17.32■□□□□ 0.36
SCARF1-203ENST00000434376 JADE2Q9NQC1 790 aa17.32■□□□□ 0.36
SCARF1-203ENST00000434376 RGL1Q9NZL6 768 aa17.32■□□□□ 0.36
SCARF1-203ENST00000434376 FEZ2Q9UHY8 353 aaPredicted RBP17.32■□□□□ 0.36
SCARF1-203ENST00000434376 SNED1Q8TER0 1413 aa17.32■□□□□ 0.36
SCARF1-203ENST00000434376 SHTN1A0MZ66 631 aa17.32■□□□□ 0.36
SCARF1-203ENST00000434376 KLRC4O43908 158 aa17.32■□□□□ 0.36
SCARF1-203ENST00000434376 TBC1D8O95759 1140 aa17.32■□□□□ 0.36
SCARF1-203ENST00000434376 RRAGAQ7L523 313 aa17.32■□□□□ 0.36
SCARF1-203ENST00000434376 TNRC6CQ9HCJ0 1690 aaKnown RBP17.32■□□□□ 0.36
SCARF1-203ENST00000434376 EPHB6O15197 1021 aa17.32■□□□□ 0.36
SCARF1-203ENST00000434376 PSMC6P62333 389 aa17.32■□□□□ 0.36
SCARF1-203ENST00000434376 GPBP1Q86WP2 473 aa17.32■□□□□ 0.36
SCARF1-203ENST00000434376 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.32■□□□□ 0.36
SCARF1-203ENST00000434376 LRP5O75197 1615 aa17.31■□□□□ 0.36
SCARF1-203ENST00000434376 BTAF1O14981 1849 aa17.31■□□□□ 0.36
SCARF1-203ENST00000434376 SH3BP5LQ7L8J4 393 aa17.31■□□□□ 0.36
SCARF1-203ENST00000434376 MB21D1Q8N884 522 aa17.31■□□□□ 0.36
SCARF1-203ENST00000434376 ZNHIT6Q9NWK9 470 aaKnown RBP17.31■□□□□ 0.36
SCARF1-203ENST00000434376 EPN1Q9Y6I3 576 aaPredicted RBP17.31■□□□□ 0.36
SCARF1-203ENST00000434376 EPS15P42566 896 aa17.31■□□□□ 0.36
SCARF1-203ENST00000434376 LEKR1Q6ZMV7 388 aa17.31■□□□□ 0.36
SCARF1-203ENST00000434376 PDE11AQ9HCR9 933 aa17.31■□□□□ 0.36
SCARF1-203ENST00000434376 FAM198AQ9UFP1 575 aa17.31■□□□□ 0.36
SCARF1-203ENST00000434376 MYH15Q9Y2K3 1946 aa17.31■□□□□ 0.36
SCARF1-203ENST00000434376 PNMA6FA0A0J9YX94 578 aa17.31■□□□□ 0.36
SCARF1-203ENST00000434376 SPDYE3A6NKU9 549 aa17.31■□□□□ 0.36
SCARF1-203ENST00000434376 DCAF17Q5H9S7 520 aaPredicted RBP17.31■□□□□ 0.36
SCARF1-203ENST00000434376 DUSP9Q99956 384 aaKnown RBP17.31■□□□□ 0.36
SCARF1-203ENST00000434376 GLIS2Q9BZE0 524 aaPredicted RBP17.31■□□□□ 0.36
SCARF1-203ENST00000434376 TMEM39BQ9GZU3 492 aa17.31■□□□□ 0.36
SCARF1-203ENST00000434376 SEMA6BQ9H3T3 888 aa17.31■□□□□ 0.36
SCARF1-203ENST00000434376 PHLPP2Q6ZVD8 1323 aa17.3■□□□□ 0.36
SCARF1-203ENST00000434376 ZBTB5O15062 677 aa17.3■□□□□ 0.36
SCARF1-203ENST00000434376 CLIC2O15247 247 aa17.3■□□□□ 0.36
SCARF1-203ENST00000434376 BUB1O43683 1085 aa17.3■□□□□ 0.36
SCARF1-203ENST00000434376 AKR1B10O60218 316 aa17.3■□□□□ 0.36
SCARF1-203ENST00000434376 PNMA5Q96PV4 448 aa17.3■□□□□ 0.36
SCARF1-203ENST00000434376 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.3■□□□□ 0.36
SCARF1-203ENST00000434376 H7C1D1 291 aa17.3■□□□□ 0.36
SCARF1-203ENST00000434376 RBAK-RBAKDNI3L0D1 243 aa17.3■□□□□ 0.36
SCARF1-203ENST00000434376 ZNF185O15231 689 aa17.3■□□□□ 0.36
SCARF1-203ENST00000434376 ZRANB2O95218 330 aaKnown RBP eCLIP17.3■□□□□ 0.36
SCARF1-203ENST00000434376 AMPD3Q01432 767 aa17.3■□□□□ 0.36
SCARF1-203ENST00000434376 RRP1BQ14684 758 aaKnown RBP17.3■□□□□ 0.36
SCARF1-203ENST00000434376 RASSF4Q9H2L5 321 aa17.3■□□□□ 0.36
SCARF1-203ENST00000434376 SH3GLB2Q9NR46 395 aa17.3■□□□□ 0.36
SCARF1-203ENST00000434376 BLOC1S4Q9NUP1 217 aa17.3■□□□□ 0.36
SCARF1-203ENST00000434376 ADAM21Q9UKJ8 722 aa17.3■□□□□ 0.36
SCARF1-203ENST00000434376 M0R2N6 131 aa17.29■□□□□ 0.36
SCARF1-203ENST00000434376 NDUFB10O96000 172 aa17.29■□□□□ 0.36
SCARF1-203ENST00000434376 CTTNQ14247 550 aaKnown RBP17.29■□□□□ 0.36
SCARF1-203ENST00000434376 LONRF2Q1L5Z9 754 aa17.29■□□□□ 0.36
SCARF1-203ENST00000434376 ASPRV1Q53RT3 343 aa17.29■□□□□ 0.36
SCARF1-203ENST00000434376 SLC27A3Q5K4L6 730 aa17.29■□□□□ 0.36
SCARF1-203ENST00000434376 OR8K1Q8NGG5 319 aa17.29■□□□□ 0.36
SCARF1-203ENST00000434376 GOLGA1Q92805 767 aa17.29■□□□□ 0.36
SCARF1-203ENST00000434376 LZTS2Q9BRK4 669 aa17.29■□□□□ 0.36
SCARF1-203ENST00000434376 KBTBD4Q9NVX7 518 aa17.29■□□□□ 0.36
SCARF1-203ENST00000434376 ATF5Q9Y2D1 282 aaPredicted RBP17.29■□□□□ 0.36
SCARF1-203ENST00000434376 NID2Q14112 1375 aa17.29■□□□□ 0.36
SCARF1-203ENST00000434376 SPAG1Q07617 926 aa17.29■□□□□ 0.36
SCARF1-203ENST00000434376 FAM83BQ5T0W9 1011 aa17.29■□□□□ 0.36
SCARF1-203ENST00000434376 TPH2Q8IWU9 490 aa17.29■□□□□ 0.36
SCARF1-203ENST00000434376 GSPT2Q8IYD1 628 aaKnown RBP17.29■□□□□ 0.36
SCARF1-203ENST00000434376 LACRTQ9GZZ8 138 aa17.29■□□□□ 0.36
SCARF1-203ENST00000434376 CWC15Q9P013 229 aaKnown RBP17.29■□□□□ 0.36
SCARF1-203ENST00000434376 A0A1W2PRG0 241 aa17.29■□□□□ 0.36
SCARF1-203ENST00000434376 CTAGE9A4FU28 777 aa17.29■□□□□ 0.36
SCARF1-203ENST00000434376 ECM2O94769 699 aaPredicted RBP17.29■□□□□ 0.36
SCARF1-203ENST00000434376 ZBTB7AO95365 584 aa17.29■□□□□ 0.36
SCARF1-203ENST00000434376 HOXA10P31260 410 aaPredicted RBP17.29■□□□□ 0.36
SCARF1-203ENST00000434376 ANO3Q9BYT9 981 aa17.29■□□□□ 0.36
SCARF1-203ENST00000434376 RAB34Q9BZG1 259 aa17.29■□□□□ 0.36
SCARF1-203ENST00000434376 FAM53CQ9NYF3 392 aa17.29■□□□□ 0.36
SCARF1-203ENST00000434376 EHD2Q9NZN4 543 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms