RNA–Protein interactions for RNA: ENST00000434101.6

TRAPPC4-202, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 794 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-202ENST00000434101 Q6ZUG5 572 aa15.22■□□□□ 0.03
TRAPPC4-202ENST00000434101 SH3RF1Q7Z6J0 888 aa15.22■□□□□ 0.03
TRAPPC4-202ENST00000434101 VSIG10LQ86VR7 867 aa15.22■□□□□ 0.03
TRAPPC4-202ENST00000434101 TDHQ8IZJ6 230 aa15.22■□□□□ 0.03
TRAPPC4-202ENST00000434101 FBXL16Q8N461 479 aa15.22■□□□□ 0.03
TRAPPC4-202ENST00000434101 COPS5Q92905 334 aa15.22■□□□□ 0.03
TRAPPC4-202ENST00000434101 USP26Q9BXU7 913 aa15.22■□□□□ 0.03
TRAPPC4-202ENST00000434101 MRVI1Q9Y6F6 885 aa15.22■□□□□ 0.03
TRAPPC4-202ENST00000434101 CNTNAP5Q8WYK1 1306 aa15.21■□□□□ 0.03
TRAPPC4-202ENST00000434101 DNAH12Q6ZR08 3092 aa15.21■□□□□ 0.03
TRAPPC4-202ENST00000434101 TRIM43BA6NCK2 446 aa15.21■□□□□ 0.03
TRAPPC4-202ENST00000434101 A6NJR5 290 aa15.21■□□□□ 0.03
TRAPPC4-202ENST00000434101 EIF5BO60841 1220 aaKnown RBP15.21■□□□□ 0.03
TRAPPC4-202ENST00000434101 STAM2O75886 525 aa15.21■□□□□ 0.03
TRAPPC4-202ENST00000434101 SLC34A2O95436 690 aa15.21■□□□□ 0.03
TRAPPC4-202ENST00000434101 CPA1P15085 419 aa15.21■□□□□ 0.03
TRAPPC4-202ENST00000434101 METAP2P50579 478 aaKnown RBP eCLIP15.21■□□□□ 0.03
TRAPPC4-202ENST00000434101 PURAQ00577 322 aaKnown RBP15.21■□□□□ 0.03
TRAPPC4-202ENST00000434101 LY6KQ17RY6 165 aa15.21■□□□□ 0.03
TRAPPC4-202ENST00000434101 HEATR3Q7Z4Q2 680 aa15.21■□□□□ 0.03
TRAPPC4-202ENST00000434101 SLC43A3Q8NBI5 491 aa15.21■□□□□ 0.03
TRAPPC4-202ENST00000434101 BRF1Q92994 677 aa15.21■□□□□ 0.03
TRAPPC4-202ENST00000434101 TRIM43Q96BQ3 446 aaPredicted RBP15.21■□□□□ 0.03
TRAPPC4-202ENST00000434101 MTG1Q9BT17 334 aaPredicted RBP15.21■□□□□ 0.03
TRAPPC4-202ENST00000434101 PSTPIP2Q9H939 334 aa15.21■□□□□ 0.03
TRAPPC4-202ENST00000434101 DDX41Q9UJV9 622 aaKnown RBP15.21■□□□□ 0.03
TRAPPC4-202ENST00000434101 FRMPD4Q14CM0 1322 aa15.2■□□□□ 0.02
TRAPPC4-202ENST00000434101 hCG_1984214I3L0E3 225 aa15.2■□□□□ 0.02
TRAPPC4-202ENST00000434101 TGFB3P10600 412 aa15.2■□□□□ 0.02
TRAPPC4-202ENST00000434101 APOBRQ0VD83 1088 aa15.2■□□□□ 0.02
TRAPPC4-202ENST00000434101 GNPTABQ3T906 1256 aa15.2■□□□□ 0.02
TRAPPC4-202ENST00000434101 USP17L6PQ6QN14 398 aa15.2■□□□□ 0.02
TRAPPC4-202ENST00000434101 TEX2Q8IWB9 1127 aa15.2■□□□□ 0.02
TRAPPC4-202ENST00000434101 FAM126BQ8IXS8 530 aa15.2■□□□□ 0.02
TRAPPC4-202ENST00000434101 ZNF713Q8N859 430 aaPredicted RBP15.2■□□□□ 0.02
TRAPPC4-202ENST00000434101 BADQ92934 168 aa15.2■□□□□ 0.02
TRAPPC4-202ENST00000434101 hCG_1642624A0A1W2PR95 340 aa15.19■□□□□ 0.02
TRAPPC4-202ENST00000434101 MEIS2O14770 477 aa15.19■□□□□ 0.02
TRAPPC4-202ENST00000434101 PSMC6P62333 389 aa15.19■□□□□ 0.02
TRAPPC4-202ENST00000434101 ARHGAP1Q07960 439 aa15.19■□□□□ 0.02
TRAPPC4-202ENST00000434101 LAMC2Q13753 1193 aa15.19■□□□□ 0.02
TRAPPC4-202ENST00000434101 PPP1R18Q6NYC8 613 aa15.19■□□□□ 0.02
TRAPPC4-202ENST00000434101 XRRA1Q6P2D8 792 aa15.19■□□□□ 0.02
TRAPPC4-202ENST00000434101 RUFY3Q7L099 469 aa15.19■□□□□ 0.02
TRAPPC4-202ENST00000434101 DHX37Q8IY37 1157 aaKnown RBP15.19■□□□□ 0.02
TRAPPC4-202ENST00000434101 IL31RAQ8NI17 732 aa15.19■□□□□ 0.02
TRAPPC4-202ENST00000434101 AFG1LQ8WV93 481 aa15.19■□□□□ 0.02
TRAPPC4-202ENST00000434101 EMID1Q96A84 441 aaPredicted RBP15.19■□□□□ 0.02
TRAPPC4-202ENST00000434101 AGXT2Q9BYV1 514 aa15.19■□□□□ 0.02
TRAPPC4-202ENST00000434101 TM6SF1Q9BZW5 370 aa15.19■□□□□ 0.02
TRAPPC4-202ENST00000434101 TBX21Q9UL17 535 aa15.19■□□□□ 0.02
TRAPPC4-202ENST00000434101 CYP46A1Q9Y6A2 500 aa15.19■□□□□ 0.02
TRAPPC4-202ENST00000434101 V9GY48 417 aaPredicted RBP15.19■□□□□ 0.02
TRAPPC4-202ENST00000434101 RANBP2P49792 3224 aaKnown RBP15.19■□□□□ 0.02
TRAPPC4-202ENST00000434101 DOCK5Q9H7D0 1870 aa15.18■□□□□ 0.02
TRAPPC4-202ENST00000434101 SPDYE3A6NKU9 549 aa15.18■□□□□ 0.02
TRAPPC4-202ENST00000434101 RGS20O76081 388 aa15.18■□□□□ 0.02
TRAPPC4-202ENST00000434101 TIMP1P01033 207 aa15.18■□□□□ 0.02
TRAPPC4-202ENST00000434101 CD4P01730 458 aa15.18■□□□□ 0.02
TRAPPC4-202ENST00000434101 MMP3P08254 477 aa15.18■□□□□ 0.02
TRAPPC4-202ENST00000434101 CDC27P30260 824 aa15.18■□□□□ 0.02
TRAPPC4-202ENST00000434101 NAPAP54920 295 aa15.18■□□□□ 0.02
TRAPPC4-202ENST00000434101 FUT2Q10981 343 aa15.18■□□□□ 0.02
TRAPPC4-202ENST00000434101 DGKDQ16760 1214 aa15.18■□□□□ 0.02
TRAPPC4-202ENST00000434101 GPKOWQ92917 476 aaPredicted RBP eCLIP15.18■□□□□ 0.02
TRAPPC4-202ENST00000434101 EHMT1Q9H9B1 1298 aa15.18■□□□□ 0.02
TRAPPC4-202ENST00000434101 ZSWIM6Q9HCJ5 1215 aa15.18■□□□□ 0.02
TRAPPC4-202ENST00000434101 FAM217BQ9NTX9 383 aaPredicted RBP15.18■□□□□ 0.02
TRAPPC4-202ENST00000434101 PCDH10Q9P2E7 1040 aa15.18■□□□□ 0.02
TRAPPC4-202ENST00000434101 NID2Q14112 1375 aa15.18■□□□□ 0.02
TRAPPC4-202ENST00000434101 GRIN2DO15399 1336 aa15.17■□□□□ 0.02
TRAPPC4-202ENST00000434101 KAT6AQ92794 2004 aa15.17■□□□□ 0.02
TRAPPC4-202ENST00000434101 SUPT20HL2P0C7V6 817 aa15.17■□□□□ 0.02
TRAPPC4-202ENST00000434101 ITGB8P26012 769 aa15.17■□□□□ 0.02
TRAPPC4-202ENST00000434101 FPGSQ05932 587 aa15.17■□□□□ 0.02
TRAPPC4-202ENST00000434101 LRIT3Q3SXY7 679 aa15.17■□□□□ 0.02
TRAPPC4-202ENST00000434101 PCNX4Q63HM2 1172 aa15.17■□□□□ 0.02
TRAPPC4-202ENST00000434101 WWC2Q6AWC2 1192 aa15.17■□□□□ 0.02
TRAPPC4-202ENST00000434101 NFRKBQ6P4R8 1299 aa15.17■□□□□ 0.02
TRAPPC4-202ENST00000434101 PPTC7Q8NI37 304 aa15.17■□□□□ 0.02
TRAPPC4-202ENST00000434101 INPP4AQ96PE3 977 aaPredicted RBP15.17■□□□□ 0.02
TRAPPC4-202ENST00000434101 GLT8D2Q9H1C3 349 aa15.17■□□□□ 0.02
TRAPPC4-202ENST00000434101 TRIP12Q14669 1992 aaPredicted RBP15.16■□□□□ 0.02
TRAPPC4-202ENST00000434101 FIBPO43427 364 aa15.16■□□□□ 0.02
TRAPPC4-202ENST00000434101 GGPS1O95749 300 aa15.16■□□□□ 0.02
TRAPPC4-202ENST00000434101 UBA1P22314 1058 aaKnown RBP15.16■□□□□ 0.02
TRAPPC4-202ENST00000434101 ICAM3P32942 547 aa15.16■□□□□ 0.02
TRAPPC4-202ENST00000434101 ADD1P35611 737 aaKnown RBP15.16■□□□□ 0.02
TRAPPC4-202ENST00000434101 MRPS9P82933 396 aaKnown RBP15.16■□□□□ 0.02
TRAPPC4-202ENST00000434101 AKAP17AQ02040 695 aaKnown RBP15.16■□□□□ 0.02
TRAPPC4-202ENST00000434101 PTPN11Q06124 597 aaPredicted RBP15.16■□□□□ 0.02
TRAPPC4-202ENST00000434101 NBPF20Q3BBV1 942 aa15.16■□□□□ 0.02
TRAPPC4-202ENST00000434101 FAM47CQ5HY64 1035 aa15.16■□□□□ 0.02
TRAPPC4-202ENST00000434101 CELF3Q5SZQ8 465 aaKnown RBP15.16■□□□□ 0.02
TRAPPC4-202ENST00000434101 MYSM1Q5VVJ2 828 aa15.16■□□□□ 0.02
TRAPPC4-202ENST00000434101 MFSD5Q6N075 450 aa15.16■□□□□ 0.02
TRAPPC4-202ENST00000434101 NLRX1Q86UT6 975 aa15.16■□□□□ 0.02
TRAPPC4-202ENST00000434101 TMEM199Q8N511 208 aa15.16■□□□□ 0.02
TRAPPC4-202ENST00000434101 ALDH8A1Q9H2A2 487 aaPredicted RBP15.16■□□□□ 0.02
TRAPPC4-202ENST00000434101 MLXIPQ9HAP2 919 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms