RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 ATF4P18848 351 aaPredicted RBP6.49□□□□□ -1.37
PTPN4-205ENST00000433888 MAGEA10P43363 369 aaPredicted RBP6.49□□□□□ -1.37
PTPN4-205ENST00000433888 IQCEQ6IPM2 695 aa6.49□□□□□ -1.37
PTPN4-205ENST00000433888 SEC14L1Q92503 715 aa6.49□□□□□ -1.37
PTPN4-205ENST00000433888 ANAPC16Q96DE5 110 aa6.49□□□□□ -1.37
PTPN4-205ENST00000433888 MYRFQ9Y2G1 1151 aa6.49□□□□□ -1.37
PTPN4-205ENST00000433888 UNCXA6NJT0 531 aa6.48□□□□□ -1.37
PTPN4-205ENST00000433888 TBX1O43435 398 aa6.48□□□□□ -1.37
PTPN4-205ENST00000433888 CAPNS1P04632 268 aa6.48□□□□□ -1.37
PTPN4-205ENST00000433888 SCG5P05408 212 aa6.48□□□□□ -1.37
PTPN4-205ENST00000433888 NAT2P11245 290 aa6.48□□□□□ -1.37
PTPN4-205ENST00000433888 INSRRP14616 1297 aa6.48□□□□□ -1.37
PTPN4-205ENST00000433888 FPR2P25090 351 aa6.48□□□□□ -1.37
PTPN4-205ENST00000433888 ITGA1P56199 1179 aa6.48□□□□□ -1.37
PTPN4-205ENST00000433888 ADAM17P78536 824 aa6.48□□□□□ -1.37
PTPN4-205ENST00000433888 TESK1Q15569 626 aa6.48□□□□□ -1.37
PTPN4-205ENST00000433888 CR1LQ2VPA4 569 aa6.48□□□□□ -1.37
PTPN4-205ENST00000433888 E4F1Q66K89 784 aaPredicted RBP6.48□□□□□ -1.37
PTPN4-205ENST00000433888 CD300LDQ6UXZ3 194 aa6.48□□□□□ -1.37
PTPN4-205ENST00000433888 STK32CQ86UX6 486 aa6.48□□□□□ -1.37
PTPN4-205ENST00000433888 NLRP10Q86W26 655 aa6.48□□□□□ -1.37
PTPN4-205ENST00000433888 SSBP3Q9BWW4 388 aaPredicted RBP6.48□□□□□ -1.37
PTPN4-205ENST00000433888 KRTAP3-1Q9BYR8 98 aa6.48□□□□□ -1.37
PTPN4-205ENST00000433888 AP5M1Q9H0R1 490 aa6.48□□□□□ -1.37
PTPN4-205ENST00000433888 PALD1Q9ULE6 856 aa6.48□□□□□ -1.37
PTPN4-205ENST00000433888 TIMM13Q9Y5L4 95 aaPredicted RBP6.48□□□□□ -1.37
PTPN4-205ENST00000433888 HOXC12P31275 282 aa6.47□□□□□ -1.37
PTPN4-205ENST00000433888 RGL3Q3MIN7 710 aa6.47□□□□□ -1.37
PTPN4-205ENST00000433888 TBC1D10BQ4KMP7 808 aaPredicted RBP6.47□□□□□ -1.37
PTPN4-205ENST00000433888 MROH9Q5TGP6 573 aa6.47□□□□□ -1.37
PTPN4-205ENST00000433888 FAM126BQ8IXS8 530 aa6.47□□□□□ -1.37
PTPN4-205ENST00000433888 BTN2A2Q8WVV5 523 aa6.47□□□□□ -1.37
PTPN4-205ENST00000433888 BTG4Q9NY30 223 aa6.47□□□□□ -1.37
PTPN4-205ENST00000433888 FBXL7Q9UJT9 491 aa6.47□□□□□ -1.37
PTPN4-205ENST00000433888 INPP5FQ9Y2H2 1132 aa6.47□□□□□ -1.37
PTPN4-205ENST00000433888 ITGAVP06756 1048 aa6.46□□□□□ -1.38
PTPN4-205ENST00000433888 BCL6P41182 706 aa6.46□□□□□ -1.38
PTPN4-205ENST00000433888 RPL11P62913 178 aaKnown RBP6.46□□□□□ -1.38
PTPN4-205ENST00000433888 ADAM9Q13443 819 aa6.46□□□□□ -1.38
PTPN4-205ENST00000433888 ZNF827Q17R98 1081 aa6.46□□□□□ -1.38
PTPN4-205ENST00000433888 FAM26FQ5R3K3 315 aa6.46□□□□□ -1.38
PTPN4-205ENST00000433888 CEP68Q76N32 757 aa6.46□□□□□ -1.38
PTPN4-205ENST00000433888 MILR1Q7Z6M3 343 aa6.46□□□□□ -1.38
PTPN4-205ENST00000433888 TTLL6Q8N841 843 aa6.46□□□□□ -1.38
PTPN4-205ENST00000433888 MROH6A6NGR9 719 aa6.45□□□□□ -1.38
PTPN4-205ENST00000433888 SMAD7O15105 426 aaKnown RBP6.45□□□□□ -1.38
PTPN4-205ENST00000433888 PLATP00750 562 aa6.45□□□□□ -1.38
PTPN4-205ENST00000433888 PUM1Q14671 1186 aaKnown RBP eCLIP6.45□□□□□ -1.38
PTPN4-205ENST00000433888 SF1Q15637 639 aaKnown RBP6.45□□□□□ -1.38
PTPN4-205ENST00000433888 ACBD5Q5T8D3 534 aaPredicted RBP6.45□□□□□ -1.38
PTPN4-205ENST00000433888 DENND5AQ6IQ26 1287 aa6.45□□□□□ -1.38
PTPN4-205ENST00000433888 C6orf15Q6UXA7 325 aaPredicted RBP6.45□□□□□ -1.38
PTPN4-205ENST00000433888 ZNF227Q86WZ6 799 aa6.45□□□□□ -1.38
PTPN4-205ENST00000433888 TXNDC5Q8NBS9 432 aaKnown RBP6.45□□□□□ -1.38
PTPN4-205ENST00000433888 RCBTB1Q8NDN9 531 aa6.45□□□□□ -1.38
PTPN4-205ENST00000433888 DIO2Q92813 273 aa6.45□□□□□ -1.38
PTPN4-205ENST00000433888 SMPD4Q9NXE4 827 aa6.45□□□□□ -1.38
PTPN4-205ENST00000433888 TADA3O75528 432 aa6.44□□□□□ -1.38
PTPN4-205ENST00000433888 STAT5AP42229 794 aa6.44□□□□□ -1.38
PTPN4-205ENST00000433888 GTF2A2P52657 109 aa6.44□□□□□ -1.38
PTPN4-205ENST00000433888 KIAA2012Q0VF49 1180 aa6.44□□□□□ -1.38
PTPN4-205ENST00000433888 MCTP2Q6DN12 878 aa6.44□□□□□ -1.38
PTPN4-205ENST00000433888 ZC3H18Q86VM9 953 aaKnown RBP6.44□□□□□ -1.38
PTPN4-205ENST00000433888 FAM178BQ8IXR5 827 aa6.44□□□□□ -1.38
PTPN4-205ENST00000433888 PPP1R14AQ96A00 147 aa6.44□□□□□ -1.38
PTPN4-205ENST00000433888 TRMT2BQ96GJ1 504 aaKnown RBP6.44□□□□□ -1.38
PTPN4-205ENST00000433888 SAMD11Q96NU1 681 aa6.44□□□□□ -1.38
PTPN4-205ENST00000433888 GPR20Q99678 358 aa6.44□□□□□ -1.38
PTPN4-205ENST00000433888 C1QTNF3Q9BXJ4 246 aa6.44□□□□□ -1.38
PTPN4-205ENST00000433888 TMPRSS5Q9H3S3 457 aa6.44□□□□□ -1.38
PTPN4-205ENST00000433888 INVSQ9Y283 1065 aa6.44□□□□□ -1.38
PTPN4-205ENST00000433888 B2RBV5 119 aa6.43□□□□□ -1.38
PTPN4-205ENST00000433888 DDX3XO00571 662 aaKnown RBP eCLIP6.43□□□□□ -1.38
PTPN4-205ENST00000433888 MEFVO15553 781 aaPredicted RBP6.43□□□□□ -1.38
PTPN4-205ENST00000433888 SUSD5O60279 629 aa6.43□□□□□ -1.38
PTPN4-205ENST00000433888 LCP1P13796 627 aa6.43□□□□□ -1.38
PTPN4-205ENST00000433888 KCNAB2Q13303 367 aa6.43□□□□□ -1.38
PTPN4-205ENST00000433888 PRSS53Q2L4Q9 553 aa6.43□□□□□ -1.38
PTPN4-205ENST00000433888 MRM1Q6IN84 353 aaKnown RBP6.43□□□□□ -1.38
PTPN4-205ENST00000433888 LGI4Q8N135 537 aa6.43□□□□□ -1.38
PTPN4-205ENST00000433888 MICAL1Q8TDZ2 1067 aa6.43□□□□□ -1.38
PTPN4-205ENST00000433888 C1orf159Q96HA4 380 aa6.43□□□□□ -1.38
PTPN4-205ENST00000433888 CCDC140Q96MF4 163 aa6.43□□□□□ -1.38
PTPN4-205ENST00000433888 NGRNQ9NPE2 291 aaKnown RBP6.43□□□□□ -1.38
PTPN4-205ENST00000433888 ZNF652Q9Y2D9 606 aa6.43□□□□□ -1.38
PTPN4-205ENST00000433888 MRVI1Q9Y6F6 885 aa6.43□□□□□ -1.38
PTPN4-205ENST00000433888 C1QTNF3-AMACRE9PGA6 284 aa6.42□□□□□ -1.38
PTPN4-205ENST00000433888 H7BY64 318 aa6.42□□□□□ -1.38
PTPN4-205ENST00000433888 CPP00450 1065 aa6.42□□□□□ -1.38
PTPN4-205ENST00000433888 SNRPB2P08579 225 aaKnown RBP6.42□□□□□ -1.38
PTPN4-205ENST00000433888 ZNF28P17035 718 aa6.42□□□□□ -1.38
PTPN4-205ENST00000433888 ECI1P42126 302 aa6.42□□□□□ -1.38
PTPN4-205ENST00000433888 GFRA1P56159 465 aa6.42□□□□□ -1.38
PTPN4-205ENST00000433888 SV2CQ496J9 727 aa6.42□□□□□ -1.38
PTPN4-205ENST00000433888 EMC4Q5J8M3 183 aa6.42□□□□□ -1.38
PTPN4-205ENST00000433888 TTC9BQ8N6N2 239 aa6.42□□□□□ -1.38
PTPN4-205ENST00000433888 ARRDC4Q8NCT1 418 aa6.42□□□□□ -1.38
PTPN4-205ENST00000433888 TMEM169Q96HH4 297 aa6.42□□□□□ -1.38
PTPN4-205ENST00000433888 ACTR10Q9NZ32 417 aa6.42□□□□□ -1.38
PTPN4-205ENST00000433888 WASF3Q9UPY6 502 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms