RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 BCL6P41182 706 aa8.04□□□□□ -1.12
USP54-206ENST00000433394 SLC14A2Q15849 920 aa8.04□□□□□ -1.12
USP54-206ENST00000433394 SEPT7Q16181 437 aaKnown RBP8.04□□□□□ -1.12
USP54-206ENST00000433394 INF2Q27J81 1249 aa8.04□□□□□ -1.12
USP54-206ENST00000433394 IQSEC1Q6DN90 963 aa8.04□□□□□ -1.12
USP54-206ENST00000433394 CEP68Q76N32 757 aa8.04□□□□□ -1.12
USP54-206ENST00000433394 ADGRE2Q9UHX3 823 aa8.04□□□□□ -1.12
USP54-206ENST00000433394 WNT9AO14904 365 aa8.03□□□□□ -1.12
USP54-206ENST00000433394 MAFKO60675 156 aa8.03□□□□□ -1.12
USP54-206ENST00000433394 ULK1O75385 1050 aa8.03□□□□□ -1.12
USP54-206ENST00000433394 DGKIO75912 1065 aa8.03□□□□□ -1.12
USP54-206ENST00000433394 EYA4O95677 639 aa8.03□□□□□ -1.12
USP54-206ENST00000433394 POU3F3P20264 500 aaPredicted RBP8.03□□□□□ -1.12
USP54-206ENST00000433394 KIR2DL1P43626 348 aaPredicted RBP8.03□□□□□ -1.12
USP54-206ENST00000433394 KIR2DL2P43627 348 aaPredicted RBP8.03□□□□□ -1.12
USP54-206ENST00000433394 KPNA1P52294 538 aaPredicted RBP8.03□□□□□ -1.12
USP54-206ENST00000433394 CHRNEQ04844 493 aa8.03□□□□□ -1.12
USP54-206ENST00000433394 CABP7Q86V35 215 aa8.03□□□□□ -1.12
USP54-206ENST00000433394 SPPL2CQ8IUH8 684 aa8.03□□□□□ -1.12
USP54-206ENST00000433394 MTMR8Q96EF0 704 aa8.03□□□□□ -1.12
USP54-206ENST00000433394 MAP6Q96JE9 813 aa8.03□□□□□ -1.12
USP54-206ENST00000433394 KCNJ15Q99712 375 aa8.03□□□□□ -1.12
USP54-206ENST00000433394 FAM126AQ9BYI3 521 aaPredicted RBP8.03□□□□□ -1.12
USP54-206ENST00000433394 EPB41L1Q9H4G0 881 aa8.03□□□□□ -1.12
USP54-206ENST00000433394 B4GALT6Q9UBX8 382 aa8.03□□□□□ -1.12
USP54-206ENST00000433394 SLC5A6Q9Y289 635 aa8.03□□□□□ -1.12
USP54-206ENST00000433394 TAF6LQ9Y6J9 622 aa8.03□□□□□ -1.12
USP54-206ENST00000433394 WASHC2CQ9Y4E1 1318 aa8.03□□□□□ -1.12
USP54-206ENST00000433394 WTIPA6NIX2 430 aaPredicted RBP8.02□□□□□ -1.13
USP54-206ENST00000433394 KRIT1O00522 736 aa8.02□□□□□ -1.13
USP54-206ENST00000433394 DYRK3O43781 588 aa8.02□□□□□ -1.13
USP54-206ENST00000433394 CORO7P57737 925 aa8.02□□□□□ -1.13
USP54-206ENST00000433394 ZNF174Q15697 407 aa8.02□□□□□ -1.13
USP54-206ENST00000433394 ATP13A4Q4VNC1 1196 aa8.02□□□□□ -1.13
USP54-206ENST00000433394 ZPBP2Q6X784 338 aa8.02□□□□□ -1.13
USP54-206ENST00000433394 CISD2Q8N5K1 135 aaKnown RBP8.02□□□□□ -1.13
USP54-206ENST00000433394 ANKS4BQ8N8V4 417 aa8.02□□□□□ -1.13
USP54-206ENST00000433394 GPR101Q96P66 508 aaPredicted RBP8.02□□□□□ -1.13
USP54-206ENST00000433394 CARS2Q9HA77 564 aaKnown RBP8.02□□□□□ -1.13
USP54-206ENST00000433394 MARCH2Q9P0N8 246 aa8.02□□□□□ -1.13
USP54-206ENST00000433394 PTPDC1A2A3K4 754 aa8.01□□□□□ -1.13
USP54-206ENST00000433394 FAM83GA6ND36 823 aa8.01□□□□□ -1.13
USP54-206ENST00000433394 H7C1D1 291 aa8.01□□□□□ -1.13
USP54-206ENST00000433394 RBAK-RBAKDNI3L0D1 243 aa8.01□□□□□ -1.13
USP54-206ENST00000433394 NEMP1O14524 444 aa8.01□□□□□ -1.13
USP54-206ENST00000433394 HIP1RO75146 1068 aa8.01□□□□□ -1.13
USP54-206ENST00000433394 FKBP9O95302 570 aa8.01□□□□□ -1.13
USP54-206ENST00000433394 BPIP17213 487 aa8.01□□□□□ -1.13
USP54-206ENST00000433394 KCNA6P17658 529 aa8.01□□□□□ -1.13
USP54-206ENST00000433394 LSSP48449 732 aa8.01□□□□□ -1.13
USP54-206ENST00000433394 EPHB1P54762 984 aa8.01□□□□□ -1.13
USP54-206ENST00000433394 CHRNA2Q15822 529 aa8.01□□□□□ -1.13
USP54-206ENST00000433394 GALNT18Q6P9A2 607 aa8.01□□□□□ -1.13
USP54-206ENST00000433394 FKBP9P1Q75LS8 142 aa8.01□□□□□ -1.13
USP54-206ENST00000433394 OXR1Q8N573 874 aa8.01□□□□□ -1.13
USP54-206ENST00000433394 LZTR1Q8N653 840 aa8.01□□□□□ -1.13
USP54-206ENST00000433394 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.01□□□□□ -1.13
USP54-206ENST00000433394 SLAMF8Q9P0V8 285 aa8.01□□□□□ -1.13
USP54-206ENST00000433394 CHPF2Q9P2E5 772 aa8.01□□□□□ -1.13
USP54-206ENST00000433394 PHLDB1Q86UU1 1377 aa8□□□□□ -1.13
USP54-206ENST00000433394 PRR19A6NJB7 356 aa8□□□□□ -1.13
USP54-206ENST00000433394 C22orf46C9J442 243 aa8□□□□□ -1.13
USP54-206ENST00000433394 KATNA1O75449 491 aa8□□□□□ -1.13
USP54-206ENST00000433394 ALDH1L1O75891 902 aa8□□□□□ -1.13
USP54-206ENST00000433394 CKMP06732 381 aa8□□□□□ -1.13
USP54-206ENST00000433394 RTP1P59025 263 aa8□□□□□ -1.13
USP54-206ENST00000433394 ZP2Q05996 745 aa8□□□□□ -1.13
USP54-206ENST00000433394 RSPO4Q2I0M5 234 aaPredicted RBP8□□□□□ -1.13
USP54-206ENST00000433394 NKAPLQ5M9Q1 402 aa8□□□□□ -1.13
USP54-206ENST00000433394 MROH9Q5TGP6 573 aa8□□□□□ -1.13
USP54-206ENST00000433394 MBLAC2Q68D91 279 aa8□□□□□ -1.13
USP54-206ENST00000433394 ABHD17CQ6PCB6 329 aa8□□□□□ -1.13
USP54-206ENST00000433394 CEP128Q6ZU80 1094 aa8□□□□□ -1.13
USP54-206ENST00000433394 NXPE1Q8N323 547 aa8□□□□□ -1.13
USP54-206ENST00000433394 SMC1BQ8NDV3 1235 aa8□□□□□ -1.13
USP54-206ENST00000433394 ALPK1Q96QP1 1244 aa8□□□□□ -1.13
USP54-206ENST00000433394 BOCQ9BWV1 1114 aa8□□□□□ -1.13
USP54-206ENST00000433394 PCIF1Q9H4Z3 704 aa8□□□□□ -1.13
USP54-206ENST00000433394 THG1LQ9NWX6 298 aaKnown RBP8□□□□□ -1.13
USP54-206ENST00000433394 GULP1Q9UBP9 304 aa8□□□□□ -1.13
USP54-206ENST00000433394 SPEF1Q9Y4P9 236 aa8□□□□□ -1.13
USP54-206ENST00000433394 SLC12A8A0AV02 714 aa7.99□□□□□ -1.13
USP54-206ENST00000433394 ARNTLO00327 626 aa7.99□□□□□ -1.13
USP54-206ENST00000433394 COBLO75128 1261 aa7.99□□□□□ -1.13
USP54-206ENST00000433394 TGFB1P01137 390 aa7.99□□□□□ -1.13
USP54-206ENST00000433394 FUCA1P04066 466 aa7.99□□□□□ -1.13
USP54-206ENST00000433394 KRT15P19012 456 aa7.99□□□□□ -1.13
USP54-206ENST00000433394 DSG1Q02413 1049 aa7.99□□□□□ -1.13
USP54-206ENST00000433394 GPR19Q15760 415 aa7.99□□□□□ -1.13
USP54-206ENST00000433394 NLGN4XQ8N0W4 816 aa7.99□□□□□ -1.13
USP54-206ENST00000433394 TMEM59LQ9UK28 342 aa7.99□□□□□ -1.13
USP54-206ENST00000433394 ANGEL1Q9UNK9 670 aaKnown RBP7.99□□□□□ -1.13
USP54-206ENST00000433394 ZNF891A8MT65 544 aaPredicted RBP7.98□□□□□ -1.13
USP54-206ENST00000433394 FADS2P1A8MWK0 482 aa7.98□□□□□ -1.13
USP54-206ENST00000433394 PARNO95453 639 aaKnown RBP7.98□□□□□ -1.13
USP54-206ENST00000433394 PDE6AP16499 860 aa7.98□□□□□ -1.13
USP54-206ENST00000433394 TTF1Q15361 905 aaPredicted RBP7.98□□□□□ -1.13
USP54-206ENST00000433394 OVCH1Q7RTY7 1134 aa7.98□□□□□ -1.13
USP54-206ENST00000433394 HDGFL2Q7Z4V5 671 aaPredicted RBP7.98□□□□□ -1.13
USP54-206ENST00000433394 TEX2Q8IWB9 1127 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 266.4 ms