RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 E2F4Q16254 413 aa12.65□□□□□ -0.38
CLDN4-202ENST00000431918 ZNF277Q9NRM2 450 aaPredicted RBP12.65□□□□□ -0.38
CLDN4-202ENST00000431918 LGALS16A8MUM7 142 aa12.65□□□□□ -0.38
CLDN4-202ENST00000431918 PPP1R12BO60237 982 aaPredicted RBP12.65□□□□□ -0.38
CLDN4-202ENST00000431918 GCNT3O95395 438 aa12.65□□□□□ -0.38
CLDN4-202ENST00000431918 HOXA10P31260 410 aaPredicted RBP12.65□□□□□ -0.38
CLDN4-202ENST00000431918 KLK7P49862 253 aa12.65□□□□□ -0.38
CLDN4-202ENST00000431918 CCDC84Q86UT8 332 aaPredicted RBP12.65□□□□□ -0.38
CLDN4-202ENST00000431918 REXO1L1PQ8IX06 675 aa12.65□□□□□ -0.38
CLDN4-202ENST00000431918 MTRQ99707 1265 aa12.65□□□□□ -0.38
CLDN4-202ENST00000431918 GLT8D2Q9H1C3 349 aa12.65□□□□□ -0.38
CLDN4-202ENST00000431918 MAGEF1Q9HAY2 307 aa12.65□□□□□ -0.38
CLDN4-202ENST00000431918 STK17AQ9UEE5 414 aa12.65□□□□□ -0.38
CLDN4-202ENST00000431918 CETN3O15182 167 aa12.64□□□□□ -0.39
CLDN4-202ENST00000431918 SYDE2Q5VT97 1194 aa12.64□□□□□ -0.39
CLDN4-202ENST00000431918 SH3RF1Q7Z6J0 888 aa12.64□□□□□ -0.39
CLDN4-202ENST00000431918 NUP58Q9BVL2 599 aa12.64□□□□□ -0.39
CLDN4-202ENST00000431918 MKRN1Q9UHC7 482 aaKnown RBP12.64□□□□□ -0.39
CLDN4-202ENST00000431918 PCDHB13Q9Y5F0 798 aa12.64□□□□□ -0.39
CLDN4-202ENST00000431918 AHDC1Q5TGY3 1603 aaPredicted RBP12.64□□□□□ -0.39
CLDN4-202ENST00000431918 POTEFA5A3E0 1075 aa12.64□□□□□ -0.39
CLDN4-202ENST00000431918 NDUFA10O95299 355 aa12.64□□□□□ -0.39
CLDN4-202ENST00000431918 PLA2G4BP0C869 781 aa12.64□□□□□ -0.39
CLDN4-202ENST00000431918 POTEIP0CG38 1075 aa12.64□□□□□ -0.39
CLDN4-202ENST00000431918 PRPHP41219 470 aa12.64□□□□□ -0.39
CLDN4-202ENST00000431918 RNASE9P60153 205 aaKnown RBP12.64□□□□□ -0.39
CLDN4-202ENST00000431918 POTEGQ6S5H5 508 aa12.64□□□□□ -0.39
CLDN4-202ENST00000431918 POTEEQ6S8J3 1075 aa12.64□□□□□ -0.39
CLDN4-202ENST00000431918 TMEM179Q6ZVK1 233 aa12.64□□□□□ -0.39
CLDN4-202ENST00000431918 GDAP1L1Q96MZ0 367 aa12.64□□□□□ -0.39
CLDN4-202ENST00000431918 THAP9Q9H5L6 903 aa12.64□□□□□ -0.39
CLDN4-202ENST00000431918 MYH13Q9UKX3 1938 aa12.64□□□□□ -0.39
CLDN4-202ENST00000431918 NPHP3-ACAD11A0A0J9YXS1 232 aa12.64□□□□□ -0.39
CLDN4-202ENST00000431918 hCG_1984214I3L0E3 225 aa12.64□□□□□ -0.39
CLDN4-202ENST00000431918 CTIFO43310 598 aaKnown RBP12.64□□□□□ -0.39
CLDN4-202ENST00000431918 PHACTR2O75167 634 aa12.64□□□□□ -0.39
CLDN4-202ENST00000431918 TACC1O75410 805 aa12.64□□□□□ -0.39
CLDN4-202ENST00000431918 MYL1P05976 194 aa12.64□□□□□ -0.39
CLDN4-202ENST00000431918 SHMT1P34896 483 aa12.64□□□□□ -0.39
CLDN4-202ENST00000431918 USP8P40818 1118 aa12.64□□□□□ -0.39
CLDN4-202ENST00000431918 TNIP1Q15025 636 aa12.64□□□□□ -0.39
CLDN4-202ENST00000431918 ZNF713Q8N859 430 aaPredicted RBP12.64□□□□□ -0.39
CLDN4-202ENST00000431918 ANKS1AQ92625 1134 aa12.64□□□□□ -0.39
CLDN4-202ENST00000431918 ALS2CR12Q96Q35 445 aa12.64□□□□□ -0.39
CLDN4-202ENST00000431918 NAP1L4Q99733 375 aaKnown RBP12.64□□□□□ -0.39
CLDN4-202ENST00000431918 ABCA3Q99758 1704 aa12.64□□□□□ -0.39
CLDN4-202ENST00000431918 SFI1A8K8P3 1242 aa12.64□□□□□ -0.39
CLDN4-202ENST00000431918 MAGEA1P43355 309 aa12.64□□□□□ -0.39
CLDN4-202ENST00000431918 PTPROQ16827 1216 aa12.64□□□□□ -0.39
CLDN4-202ENST00000431918 SLC35G1Q2M3R5 365 aa12.64□□□□□ -0.39
CLDN4-202ENST00000431918 ZNF772Q68DY9 489 aaPredicted RBP12.64□□□□□ -0.39
CLDN4-202ENST00000431918 RDH13Q8NBN7 331 aa12.64□□□□□ -0.39
CLDN4-202ENST00000431918 SUPT20HQ8NEM7 779 aa12.64□□□□□ -0.39
CLDN4-202ENST00000431918 MED15Q96RN5 788 aa12.64□□□□□ -0.39
CLDN4-202ENST00000431918 EHMT1Q9H9B1 1298 aa12.64□□□□□ -0.39
CLDN4-202ENST00000431918 AGPAT5Q9NUQ2 364 aa12.64□□□□□ -0.39
CLDN4-202ENST00000431918 LIMA1Q9UHB6 759 aaKnown RBP12.64□□□□□ -0.39
CLDN4-202ENST00000431918 EFCAB8A8MWE9 144 aa12.63□□□□□ -0.39
CLDN4-202ENST00000431918 NDUFB10O96000 172 aa12.63□□□□□ -0.39
CLDN4-202ENST00000431918 ARHGAP4P98171 946 aa12.63□□□□□ -0.39
CLDN4-202ENST00000431918 TBC1D10BQ4KMP7 808 aaPredicted RBP12.63□□□□□ -0.39
CLDN4-202ENST00000431918 HHIPL2Q6UWX4 724 aa12.63□□□□□ -0.39
CLDN4-202ENST00000431918 NIM1KQ8IY84 436 aa12.63□□□□□ -0.39
CLDN4-202ENST00000431918 MYCT1Q8N699 235 aa12.63□□□□□ -0.39
CLDN4-202ENST00000431918 DAGLBQ8NCG7 672 aa12.63□□□□□ -0.39
CLDN4-202ENST00000431918 EHBP1Q8NDI1 1231 aa12.63□□□□□ -0.39
CLDN4-202ENST00000431918 IFIH1Q9BYX4 1025 aaKnown RBP12.63□□□□□ -0.39
CLDN4-202ENST00000431918 RIC8AQ9NPQ8 531 aa12.63□□□□□ -0.39
CLDN4-202ENST00000431918 TRIM10Q9UDY6 481 aa12.63□□□□□ -0.39
CLDN4-202ENST00000431918 SUGT1Q9Y2Z0 365 aa12.63□□□□□ -0.39
CLDN4-202ENST00000431918 KDM3AQ9Y4C1 1321 aa12.63□□□□□ -0.39
CLDN4-202ENST00000431918 RHOBTB3O94955 611 aa12.63□□□□□ -0.39
CLDN4-202ENST00000431918 CLCN6P51797 869 aa12.63□□□□□ -0.39
CLDN4-202ENST00000431918 APOBEC3HQ6NTF7 200 aaKnown RBP12.63□□□□□ -0.39
CLDN4-202ENST00000431918 UNC13DQ70J99 1090 aa12.63□□□□□ -0.39
CLDN4-202ENST00000431918 RAD54LQ92698 747 aa12.63□□□□□ -0.39
CLDN4-202ENST00000431918 NUDT12Q9BQG2 462 aa12.63□□□□□ -0.39
CLDN4-202ENST00000431918 LSM14BQ9BX40 385 aaKnown RBP12.63□□□□□ -0.39
CLDN4-202ENST00000431918 PLEKHA4Q9H4M7 779 aa12.63□□□□□ -0.39
CLDN4-202ENST00000431918 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.63□□□□□ -0.39
CLDN4-202ENST00000431918 PAPPAQ13219 1627 aa12.63□□□□□ -0.39
CLDN4-202ENST00000431918 SHANK3Q9BYB0 1731 aa12.63□□□□□ -0.39
CLDN4-202ENST00000431918 A0A0U1RQJ8 604 aa12.63□□□□□ -0.39
CLDN4-202ENST00000431918 PAFAH1B1P43034 410 aa12.63□□□□□ -0.39
CLDN4-202ENST00000431918 ADAM9Q13443 819 aa12.63□□□□□ -0.39
CLDN4-202ENST00000431918 PRKG1Q13976 671 aa12.63□□□□□ -0.39
CLDN4-202ENST00000431918 KCNB1Q14721 858 aa12.63□□□□□ -0.39
CLDN4-202ENST00000431918 NAALADL2Q58DX5 795 aa12.63□□□□□ -0.39
CLDN4-202ENST00000431918 FAM83BQ5T0W9 1011 aa12.63□□□□□ -0.39
CLDN4-202ENST00000431918 STRIP1Q5VSL9 837 aa12.63□□□□□ -0.39
CLDN4-202ENST00000431918 CDKAL1Q5VV42 579 aa12.63□□□□□ -0.39
CLDN4-202ENST00000431918 GIMAP8Q8ND71 665 aaPredicted RBP12.63□□□□□ -0.39
CLDN4-202ENST00000431918 ATRIPQ8WXE1 791 aa12.63□□□□□ -0.39
CLDN4-202ENST00000431918 FAM163AQ96GL9 167 aaPredicted RBP12.63□□□□□ -0.39
CLDN4-202ENST00000431918 ACBD3Q9H3P7 528 aa12.63□□□□□ -0.39
CLDN4-202ENST00000431918 NDST4Q9H3R1 872 aa12.63□□□□□ -0.39
CLDN4-202ENST00000431918 GAS7O60861 476 aa12.62□□□□□ -0.39
CLDN4-202ENST00000431918 GCFC2P16383 781 aaKnown RBP12.62□□□□□ -0.39
CLDN4-202ENST00000431918 POLR2FP61218 127 aaKnown RBP12.62□□□□□ -0.39
CLDN4-202ENST00000431918 PRMT6Q96LA8 375 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms