RNA–Protein interactions for RNA: ENST00000431460.1

TRERNA1-201, translation regulatory long non-coding RNA 1, humanhuman

TSL 2 BASIC

Gene TRERNA1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERNA1-201ENST00000431460 POLR2MP0CAP2 368 aa13.72□□□□□ -0.21
TRERNA1-201ENST00000431460 TXNP10599 105 aaKnown RBP13.72□□□□□ -0.21
TRERNA1-201ENST00000431460 ADD1P35611 737 aaKnown RBP13.72□□□□□ -0.21
TRERNA1-201ENST00000431460 HSD17B4P51659 736 aa13.72□□□□□ -0.21
TRERNA1-201ENST00000431460 CHMP4BP1P59074 171 aa13.72□□□□□ -0.21
TRERNA1-201ENST00000431460 FUT2Q10981 343 aa13.72□□□□□ -0.21
TRERNA1-201ENST00000431460 TRAF1Q13077 416 aa13.72□□□□□ -0.21
TRERNA1-201ENST00000431460 PWP2Q15269 919 aaKnown RBP13.72□□□□□ -0.21
TRERNA1-201ENST00000431460 C1orf53Q5VUE5 145 aa13.72□□□□□ -0.21
TRERNA1-201ENST00000431460 TDHQ8IZJ6 230 aa13.72□□□□□ -0.21
TRERNA1-201ENST00000431460 SCFD2Q8WU76 684 aa13.72□□□□□ -0.21
TRERNA1-201ENST00000431460 PPP1R13LQ8WUF5 828 aa13.72□□□□□ -0.21
TRERNA1-201ENST00000431460 ZFP91Q96JP5 570 aaPredicted RBP13.72□□□□□ -0.21
TRERNA1-201ENST00000431460 PXMP2Q9NR77 195 aa13.72□□□□□ -0.21
TRERNA1-201ENST00000431460 LTBP2Q14767 1821 aa13.71□□□□□ -0.21
TRERNA1-201ENST00000431460 ELP1O95163 1332 aa13.71□□□□□ -0.21
TRERNA1-201ENST00000431460 SORBS3O60504 671 aa13.71□□□□□ -0.21
TRERNA1-201ENST00000431460 PFKFB2O60825 505 aa13.71□□□□□ -0.21
TRERNA1-201ENST00000431460 RAG1P15918 1043 aa13.71□□□□□ -0.21
TRERNA1-201ENST00000431460 ITGB8P26012 769 aa13.71□□□□□ -0.21
TRERNA1-201ENST00000431460 BMP8BP34820 402 aa13.71□□□□□ -0.21
TRERNA1-201ENST00000431460 FAAP100Q0VG06 881 aa13.71□□□□□ -0.21
TRERNA1-201ENST00000431460 TTLL4Q14679 1199 aa13.71□□□□□ -0.21
TRERNA1-201ENST00000431460 STXBP2Q15833 593 aa13.71□□□□□ -0.21
TRERNA1-201ENST00000431460 IL31RAQ8NI17 732 aa13.71□□□□□ -0.21
TRERNA1-201ENST00000431460 LRCH3Q96II8 777 aa13.71□□□□□ -0.21
TRERNA1-201ENST00000431460 MAF1Q9H063 256 aa13.71□□□□□ -0.21
TRERNA1-201ENST00000431460 SLKQ9H2G2 1235 aaPredicted RBP13.71□□□□□ -0.21
TRERNA1-201ENST00000431460 LIMCH1Q9UPQ0 1083 aa13.71□□□□□ -0.21
TRERNA1-201ENST00000431460 A0A1W2PPC1 479 aa13.7□□□□□ -0.22
TRERNA1-201ENST00000431460 RBM47A0AV96 593 aaKnown RBP13.7□□□□□ -0.22
TRERNA1-201ENST00000431460 ARVCFO00192 962 aa13.7□□□□□ -0.22
TRERNA1-201ENST00000431460 ST18O60284 1047 aa13.7□□□□□ -0.22
TRERNA1-201ENST00000431460 NR3C2P08235 984 aa13.7□□□□□ -0.22
TRERNA1-201ENST00000431460 IFNAR1P17181 557 aa13.7□□□□□ -0.22
TRERNA1-201ENST00000431460 CPT1AP50416 773 aa13.7□□□□□ -0.22
TRERNA1-201ENST00000431460 CCT2P78371 535 aaKnown RBP13.7□□□□□ -0.22
TRERNA1-201ENST00000431460 NTRK3Q16288 839 aa13.7□□□□□ -0.22
TRERNA1-201ENST00000431460 LY6KQ17RY6 165 aa13.7□□□□□ -0.22
TRERNA1-201ENST00000431460 ANKRD33Q7Z3H0 272 aa13.7□□□□□ -0.22
TRERNA1-201ENST00000431460 IWS1Q96ST2 819 aa13.7□□□□□ -0.22
TRERNA1-201ENST00000431460 PPP1R12CQ9BZL4 782 aa13.7□□□□□ -0.22
TRERNA1-201ENST00000431460 NCOA5Q9HCD5 579 aaKnown RBP13.7□□□□□ -0.22
TRERNA1-201ENST00000431460 Q9Y3F1 56 aa13.7□□□□□ -0.22
TRERNA1-201ENST00000431460 MRVI1Q9Y6F6 885 aa13.7□□□□□ -0.22
TRERNA1-201ENST00000431460 MROH7Q68CQ1 1323 aa13.69□□□□□ -0.22
TRERNA1-201ENST00000431460 CNTNAP5Q8WYK1 1306 aa13.69□□□□□ -0.22
TRERNA1-201ENST00000431460 NKX3-2P78367 333 aa13.69□□□□□ -0.22
TRERNA1-201ENST00000431460 STK3Q13188 491 aa13.69□□□□□ -0.22
TRERNA1-201ENST00000431460 ITGA7Q13683 1181 aa13.69□□□□□ -0.22
TRERNA1-201ENST00000431460 ME3Q16798 604 aa13.69□□□□□ -0.22
TRERNA1-201ENST00000431460 FAM47CQ5HY64 1035 aa13.69□□□□□ -0.22
TRERNA1-201ENST00000431460 HEATR3Q7Z4Q2 680 aa13.69□□□□□ -0.22
TRERNA1-201ENST00000431460 GPKOWQ92917 476 aaPredicted RBP eCLIP13.69□□□□□ -0.22
TRERNA1-201ENST00000431460 ZSCAN31Q96LW9 406 aaPredicted RBP13.69□□□□□ -0.22
TRERNA1-201ENST00000431460 PDCD2LQ9BRP1 358 aa13.69□□□□□ -0.22
TRERNA1-201ENST00000431460 POLR3EQ9NVU0 708 aa13.69□□□□□ -0.22
TRERNA1-201ENST00000431460 V9GY48 417 aaPredicted RBP13.69□□□□□ -0.22
TRERNA1-201ENST00000431460 GRIN2DO15399 1336 aa13.68□□□□□ -0.22
TRERNA1-201ENST00000431460 LAMA3Q16787 3333 aa13.68□□□□□ -0.22
TRERNA1-201ENST00000431460 CPLX1O14810 134 aa13.68□□□□□ -0.22
TRERNA1-201ENST00000431460 KIAA0355O15063 1070 aa13.68□□□□□ -0.22
TRERNA1-201ENST00000431460 NKRFO15226 690 aaKnown RBP eCLIP13.68□□□□□ -0.22
TRERNA1-201ENST00000431460 TLR3O15455 904 aaKnown RBP13.68□□□□□ -0.22
TRERNA1-201ENST00000431460 PRPF3O43395 683 aaKnown RBP13.68□□□□□ -0.22
TRERNA1-201ENST00000431460 CABYRO75952 493 aa13.68□□□□□ -0.22
TRERNA1-201ENST00000431460 CCND2P30279 289 aa13.68□□□□□ -0.22
TRERNA1-201ENST00000431460 MCM2P49736 904 aa13.68□□□□□ -0.22
TRERNA1-201ENST00000431460 CDK7P50613 346 aa13.68□□□□□ -0.22
TRERNA1-201ENST00000431460 PURAQ00577 322 aaKnown RBP13.68□□□□□ -0.22
TRERNA1-201ENST00000431460 SCRN1Q12765 414 aa13.68□□□□□ -0.22
TRERNA1-201ENST00000431460 PGM5Q15124 567 aa13.68□□□□□ -0.22
TRERNA1-201ENST00000431460 BRDTQ58F21 947 aaPredicted RBP13.68□□□□□ -0.22
TRERNA1-201ENST00000431460 C9orf50Q5SZB4 431 aa13.68□□□□□ -0.22
TRERNA1-201ENST00000431460 CPLX2Q6PUV4 134 aaKnown RBP13.68□□□□□ -0.22
TRERNA1-201ENST00000431460 USP17L6PQ6QN14 398 aa13.68□□□□□ -0.22
TRERNA1-201ENST00000431460 FAM126BQ8IXS8 530 aa13.68□□□□□ -0.22
TRERNA1-201ENST00000431460 SMARCC2Q8TAQ2 1214 aa13.68□□□□□ -0.22
TRERNA1-201ENST00000431460 AFG1LQ8WV93 481 aa13.68□□□□□ -0.22
TRERNA1-201ENST00000431460 CUL5Q93034 780 aa13.68□□□□□ -0.22
TRERNA1-201ENST00000431460 GTF3C6Q969F1 213 aa13.68□□□□□ -0.22
TRERNA1-201ENST00000431460 SH2B1Q9NRF2 756 aaPredicted RBP13.68□□□□□ -0.22
TRERNA1-201ENST00000431460 EIF3JO75822 258 aaKnown RBP13.67□□□□□ -0.22
TRERNA1-201ENST00000431460 CDKL5O76039 1030 aa13.67□□□□□ -0.22
TRERNA1-201ENST00000431460 LARGE1O95461 756 aa13.67□□□□□ -0.22
TRERNA1-201ENST00000431460 GH1P01241 217 aa13.67□□□□□ -0.22
TRERNA1-201ENST00000431460 GHRHRQ02643 423 aa13.67□□□□□ -0.22
TRERNA1-201ENST00000431460 ARHGAP1Q07960 439 aa13.67□□□□□ -0.22
TRERNA1-201ENST00000431460 UBE2SQ16763 222 aa13.67□□□□□ -0.22
TRERNA1-201ENST00000431460 CCDC62Q6P9F0 684 aa13.67□□□□□ -0.22
TRERNA1-201ENST00000431460 SAMD3Q8N6K7 520 aa13.67□□□□□ -0.22
TRERNA1-201ENST00000431460 TOX2Q96NM4 488 aa13.67□□□□□ -0.22
TRERNA1-201ENST00000431460 MTG1Q9BT17 334 aaPredicted RBP13.67□□□□□ -0.22
TRERNA1-201ENST00000431460 RNF26Q9BY78 433 aaPredicted RBP13.67□□□□□ -0.22
TRERNA1-201ENST00000431460 TRPV6Q9H1D0 765 aa13.67□□□□□ -0.22
TRERNA1-201ENST00000431460 MAP3K20Q9NYL2 800 aaKnown RBP13.67□□□□□ -0.22
TRERNA1-201ENST00000431460 TBX21Q9UL17 535 aa13.67□□□□□ -0.22
TRERNA1-201ENST00000431460 SZT2Q5T011 3432 aa13.66□□□□□ -0.22
TRERNA1-201ENST00000431460 hCG_1984214I3L0E3 225 aa13.66□□□□□ -0.22
TRERNA1-201ENST00000431460 B4GALT4O60513 344 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms