RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 TAF12Q16514 161 aa14.31□□□□□ -0.12
PTCH1-207ENST00000429896 PDXDC2PQ6P474 469 aa14.31□□□□□ -0.12
PTCH1-207ENST00000429896 CLIC6Q96NY7 704 aa14.31□□□□□ -0.12
PTCH1-207ENST00000429896 TBC1D22BQ9NU19 505 aa14.31□□□□□ -0.12
PTCH1-207ENST00000429896 RGS17Q9UGC6 210 aaPredicted RBP14.31□□□□□ -0.12
PTCH1-207ENST00000429896 CMA1P23946 247 aa14.3□□□□□ -0.12
PTCH1-207ENST00000429896 SLC39A14Q15043 492 aa14.3□□□□□ -0.12
PTCH1-207ENST00000429896 CHST13Q8NET6 341 aa14.3□□□□□ -0.12
PTCH1-207ENST00000429896 C16orf45Q96MC5 204 aaPredicted RBP14.3□□□□□ -0.12
PTCH1-207ENST00000429896 CSRNP2Q9H175 543 aa14.3□□□□□ -0.12
PTCH1-207ENST00000429896 MAGEF1Q9HAY2 307 aa14.3□□□□□ -0.12
PTCH1-207ENST00000429896 MANSC4A6NHS7 340 aaPredicted RBP14.3□□□□□ -0.12
PTCH1-207ENST00000429896 PAK1Q13153 545 aa14.3□□□□□ -0.12
PTCH1-207ENST00000429896 CEP63Q96MT8 703 aa14.3□□□□□ -0.12
PTCH1-207ENST00000429896 LARSQ9P2J5 1176 aaKnown RBP14.3□□□□□ -0.12
PTCH1-207ENST00000429896 MAPK8IP1Q9UQF2 711 aa14.3□□□□□ -0.12
PTCH1-207ENST00000429896 TMEM110-MUSTN1A8MSY1 372 aa14.3□□□□□ -0.12
PTCH1-207ENST00000429896 ALDH1A1P00352 501 aa14.3□□□□□ -0.12
PTCH1-207ENST00000429896 CERS5Q8N5B7 392 aa14.3□□□□□ -0.12
PTCH1-207ENST00000429896 SRBD1Q8N5C6 995 aaKnown RBP14.3□□□□□ -0.12
PTCH1-207ENST00000429896 SLC17A8Q8NDX2 589 aa14.3□□□□□ -0.12
PTCH1-207ENST00000429896 ZNF541Q9H0D2 1346 aa14.3□□□□□ -0.12
PTCH1-207ENST00000429896 TBC1D8BQ0IIM8 1120 aa14.3□□□□□ -0.12
PTCH1-207ENST00000429896 ZC3H15Q8WU90 426 aaKnown RBP14.3□□□□□ -0.12
PTCH1-207ENST00000429896 TMEM260Q9NX78 707 aa14.3□□□□□ -0.12
PTCH1-207ENST00000429896 CD2BP2O95400 341 aaKnown RBP14.3□□□□□ -0.12
PTCH1-207ENST00000429896 HOOK3Q86VS8 718 aa14.3□□□□□ -0.12
PTCH1-207ENST00000429896 FAM107BQ9H098 131 aa14.3□□□□□ -0.12
PTCH1-207ENST00000429896 POLR3EQ9NVU0 708 aa14.3□□□□□ -0.12
PTCH1-207ENST00000429896 PCDHA7Q9UN72 937 aa14.3□□□□□ -0.12
PTCH1-207ENST00000429896 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.3□□□□□ -0.12
PTCH1-207ENST00000429896 PFASO15067 1338 aa14.3□□□□□ -0.12
PTCH1-207ENST00000429896 CICQ96RK0 1608 aaPredicted RBP14.29□□□□□ -0.12
PTCH1-207ENST00000429896 UBXN1Q04323 297 aa14.29□□□□□ -0.12
PTCH1-207ENST00000429896 Q3C1V9 767 aa14.29□□□□□ -0.12
PTCH1-207ENST00000429896 ATG4CQ96DT6 458 aa14.29□□□□□ -0.12
PTCH1-207ENST00000429896 GSDMDP57764 484 aa14.29□□□□□ -0.12
PTCH1-207ENST00000429896 PDCL2Q8N4E4 241 aa14.29□□□□□ -0.12
PTCH1-207ENST00000429896 NR1I2O75469 434 aa14.29□□□□□ -0.12
PTCH1-207ENST00000429896 GNAT1P11488 350 aa14.29□□□□□ -0.12
PTCH1-207ENST00000429896 MRPS9P82933 396 aaKnown RBP14.29□□□□□ -0.12
PTCH1-207ENST00000429896 KCNV1Q6PIU1 500 aa14.29□□□□□ -0.12
PTCH1-207ENST00000429896 NEK11Q8NG66 645 aa14.29□□□□□ -0.12
PTCH1-207ENST00000429896 CUEDC2Q9H467 287 aa14.29□□□□□ -0.12
PTCH1-207ENST00000429896 GAKO14976 1311 aa14.29□□□□□ -0.12
PTCH1-207ENST00000429896 ARHGAP4P98171 946 aa14.29□□□□□ -0.12
PTCH1-207ENST00000429896 AMIGO3Q86WK7 504 aa14.29□□□□□ -0.12
PTCH1-207ENST00000429896 FAM178BQ8IXR5 827 aa14.29□□□□□ -0.12
PTCH1-207ENST00000429896 TRPM4Q8TD43 1214 aa14.29□□□□□ -0.12
PTCH1-207ENST00000429896 ACER1Q8TDN7 264 aa14.29□□□□□ -0.12
PTCH1-207ENST00000429896 YARSP54577 528 aaKnown RBP14.29□□□□□ -0.12
PTCH1-207ENST00000429896 MTERF2Q49AM1 385 aa14.29□□□□□ -0.12
PTCH1-207ENST00000429896 CSGALNACT2Q8N6G5 542 aa14.29□□□□□ -0.12
PTCH1-207ENST00000429896 MLKLQ8NB16 471 aa14.29□□□□□ -0.12
PTCH1-207ENST00000429896 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.29□□□□□ -0.12
PTCH1-207ENST00000429896 CYP2B6P20813 491 aa14.28□□□□□ -0.12
PTCH1-207ENST00000429896 CLCN1P35523 988 aa14.28□□□□□ -0.12
PTCH1-207ENST00000429896 GCLCP48506 637 aaPredicted RBP14.28□□□□□ -0.12
PTCH1-207ENST00000429896 KARSQ15046 597 aaKnown RBP14.28□□□□□ -0.12
PTCH1-207ENST00000429896 FAM167AQ96KS9 214 aa14.28□□□□□ -0.12
PTCH1-207ENST00000429896 NUDT12Q9BQG2 462 aa14.28□□□□□ -0.12
PTCH1-207ENST00000429896 STX10O60499 249 aa14.28□□□□□ -0.12
PTCH1-207ENST00000429896 MARK3P27448 753 aa14.28□□□□□ -0.12
PTCH1-207ENST00000429896 CXCL11O14625 94 aa14.28□□□□□ -0.12
PTCH1-207ENST00000429896 ZSCAN12O43309 604 aa14.28□□□□□ -0.12
PTCH1-207ENST00000429896 RRP9O43818 475 aaKnown RBP14.28□□□□□ -0.12
PTCH1-207ENST00000429896 MYL5Q02045 173 aa14.28□□□□□ -0.12
PTCH1-207ENST00000429896 ANKRD13CQ8N6S4 541 aa14.28□□□□□ -0.12
PTCH1-207ENST00000429896 LARP4BQ92615 738 aaKnown RBP14.28□□□□□ -0.12
PTCH1-207ENST00000429896 MAP3K14Q99558 947 aa14.28□□□□□ -0.12
PTCH1-207ENST00000429896 PAIP2Q9BPZ3 127 aaKnown RBP14.28□□□□□ -0.12
PTCH1-207ENST00000429896 DDX4Q9NQI0 724 aaKnown RBP14.28□□□□□ -0.12
PTCH1-207ENST00000429896 KRT76Q01546 638 aa14.28□□□□□ -0.12
PTCH1-207ENST00000429896 NOC4LQ9BVI4 516 aaKnown RBP14.28□□□□□ -0.12
PTCH1-207ENST00000429896 SYNRGQ9UMZ2 1314 aa14.28□□□□□ -0.12
PTCH1-207ENST00000429896 BAATQ14032 418 aaPredicted RBP14.28□□□□□ -0.12
PTCH1-207ENST00000429896 GOLGA5Q8TBA6 731 aa14.28□□□□□ -0.12
PTCH1-207ENST00000429896 NLRP7Q8WX94 980 aa14.28□□□□□ -0.12
PTCH1-207ENST00000429896 ANTXR2P58335 489 aa14.27□□□□□ -0.12
PTCH1-207ENST00000429896 PNOCQ13519 176 aa14.27□□□□□ -0.12
PTCH1-207ENST00000429896 DOT1LQ8TEK3 1739 aa14.27□□□□□ -0.12
PTCH1-207ENST00000429896 GMCL1P1Q8NEA9 526 aa14.27□□□□□ -0.12
PTCH1-207ENST00000429896 PCDHB6Q9Y5E3 794 aa14.27□□□□□ -0.12
PTCH1-207ENST00000429896 GTPBP6O43824 516 aaPredicted RBP14.27□□□□□ -0.13
PTCH1-207ENST00000429896 GADD45BO75293 160 aaPredicted RBP14.27□□□□□ -0.13
PTCH1-207ENST00000429896 SPATA33Q96N06 139 aa14.27□□□□□ -0.13
PTCH1-207ENST00000429896 FAM193BQ96PV7 902 aaPredicted RBP14.27□□□□□ -0.13
PTCH1-207ENST00000429896 PRELPP51888 382 aa14.27□□□□□ -0.13
PTCH1-207ENST00000429896 MAATS1Q7Z4T9 603 aa14.27□□□□□ -0.13
PTCH1-207ENST00000429896 MYOCDQ8IZQ8 938 aa14.27□□□□□ -0.13
PTCH1-207ENST00000429896 TMX2Q9Y320 296 aa14.27□□□□□ -0.13
PTCH1-207ENST00000429896 WDR64B1ANS9 1081 aa14.27□□□□□ -0.13
PTCH1-207ENST00000429896 MEIS1O00470 390 aa14.27□□□□□ -0.13
PTCH1-207ENST00000429896 NLRP12P59046 1061 aa14.27□□□□□ -0.13
PTCH1-207ENST00000429896 KRT19P08727 400 aa14.26□□□□□ -0.13
PTCH1-207ENST00000429896 C7orf31Q8N865 590 aa14.26□□□□□ -0.13
PTCH1-207ENST00000429896 ADCY5O95622 1261 aa14.26□□□□□ -0.13
PTCH1-207ENST00000429896 PPATQ06203 517 aa14.26□□□□□ -0.13
PTCH1-207ENST00000429896 CTTNQ14247 550 aaKnown RBP14.26□□□□□ -0.13
PTCH1-207ENST00000429896 ODR4Q5SWX8 454 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms