RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 INTS13Q9NVM9 706 aa10.82□□□□□ -0.68
NEDD1-203ENST00000429527 BECN2A8MW95 431 aa10.82□□□□□ -0.68
NEDD1-203ENST00000429527 STX10O60499 249 aa10.82□□□□□ -0.68
NEDD1-203ENST00000429527 MSCO60682 206 aa10.82□□□□□ -0.68
NEDD1-203ENST00000429527 FANCCQ00597 558 aa10.82□□□□□ -0.68
NEDD1-203ENST00000429527 FILIP1Q7Z7B0 1213 aa10.82□□□□□ -0.68
NEDD1-203ENST00000429527 TEX2Q8IWB9 1127 aa10.82□□□□□ -0.68
NEDD1-203ENST00000429527 SAMD3Q8N6K7 520 aa10.82□□□□□ -0.68
NEDD1-203ENST00000429527 IQUBQ8NA54 791 aa10.82□□□□□ -0.68
NEDD1-203ENST00000429527 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.82□□□□□ -0.68
NEDD1-203ENST00000429527 FBXO40Q9UH90 709 aa10.82□□□□□ -0.68
NEDD1-203ENST00000429527 ITIH6Q6UXX5 1313 aa10.82□□□□□ -0.68
NEDD1-203ENST00000429527 MPHOSPH10O00566 681 aaKnown RBP10.82□□□□□ -0.68
NEDD1-203ENST00000429527 CYBAP13498 195 aa10.82□□□□□ -0.68
NEDD1-203ENST00000429527 APTXQ7Z2E3 356 aaKnown RBP10.82□□□□□ -0.68
NEDD1-203ENST00000429527 DRC7Q8IY82 874 aa10.82□□□□□ -0.68
NEDD1-203ENST00000429527 ENOX1Q8TC92 643 aaKnown RBP10.82□□□□□ -0.68
NEDD1-203ENST00000429527 C8orf76Q96K31 380 aa10.82□□□□□ -0.68
NEDD1-203ENST00000429527 FAM217BQ9NTX9 383 aaPredicted RBP10.82□□□□□ -0.68
NEDD1-203ENST00000429527 SFPQP23246 707 aaKnown RBP eCLIP10.81□□□□□ -0.68
NEDD1-203ENST00000429527 TFAP4Q01664 338 aa10.81□□□□□ -0.68
NEDD1-203ENST00000429527 PRPF38BQ5VTL8 546 aaKnown RBP10.81□□□□□ -0.68
NEDD1-203ENST00000429527 C1orf53Q5VUE5 145 aa10.81□□□□□ -0.68
NEDD1-203ENST00000429527 TBC1D10CQ8IV04 446 aa10.81□□□□□ -0.68
NEDD1-203ENST00000429527 IGDCC4Q8TDY8 1250 aa10.81□□□□□ -0.68
NEDD1-203ENST00000429527 ZNF536O15090 1300 aa10.81□□□□□ -0.68
NEDD1-203ENST00000429527 VWA3AA6NCI4 1184 aa10.81□□□□□ -0.68
NEDD1-203ENST00000429527 TSPY3P0CV98 308 aa10.81□□□□□ -0.68
NEDD1-203ENST00000429527 TSPY8P0CW00 308 aa10.81□□□□□ -0.68
NEDD1-203ENST00000429527 ME1P48163 572 aa10.81□□□□□ -0.68
NEDD1-203ENST00000429527 ZNF662Q6ZS27 426 aa10.81□□□□□ -0.68
NEDD1-203ENST00000429527 SH3RF1Q7Z6J0 888 aa10.81□□□□□ -0.68
NEDD1-203ENST00000429527 ATG4CQ96DT6 458 aa10.81□□□□□ -0.68
NEDD1-203ENST00000429527 PANX2Q96RD6 677 aa10.81□□□□□ -0.68
NEDD1-203ENST00000429527 SLC5A4Q9NY91 659 aa10.81□□□□□ -0.68
NEDD1-203ENST00000429527 MINDY4BA8MYZ0 360 aa10.8□□□□□ -0.68
NEDD1-203ENST00000429527 PRC1O43663 620 aa10.8□□□□□ -0.68
NEDD1-203ENST00000429527 BMP3P12645 472 aa10.8□□□□□ -0.68
NEDD1-203ENST00000429527 ERCC5P28715 1186 aaPredicted RBP10.8□□□□□ -0.68
NEDD1-203ENST00000429527 MORC3Q14149 939 aa10.8□□□□□ -0.68
NEDD1-203ENST00000429527 LHX8Q68G74 356 aa10.8□□□□□ -0.68
NEDD1-203ENST00000429527 CHURC1Q8WUH1 139 aa10.8□□□□□ -0.68
NEDD1-203ENST00000429527 MTMR8Q96EF0 704 aa10.8□□□□□ -0.68
NEDD1-203ENST00000429527 NAA15Q9BXJ9 866 aaKnown RBP10.8□□□□□ -0.68
NEDD1-203ENST00000429527 KRT23Q9C075 422 aa10.8□□□□□ -0.68
NEDD1-203ENST00000429527 MRFAP1Q9Y605 127 aa10.8□□□□□ -0.68
NEDD1-203ENST00000429527 PLA2G4AP47712 749 aa10.8□□□□□ -0.68
NEDD1-203ENST00000429527 JAKMIP3Q5VZ66 844 aa10.8□□□□□ -0.68
NEDD1-203ENST00000429527 SH3TC2Q8TF17 1288 aa10.8□□□□□ -0.68
NEDD1-203ENST00000429527 TEX13BQ9BXU2 312 aa10.8□□□□□ -0.68
NEDD1-203ENST00000429527 UNC93B1Q9H1C4 597 aa10.8□□□□□ -0.68
NEDD1-203ENST00000429527 FOXP1Q9H334 677 aaPredicted RBP10.8□□□□□ -0.68
NEDD1-203ENST00000429527 PRO3102Q9H379 93 aa10.8□□□□□ -0.68
NEDD1-203ENST00000429527 IFNKQ9P0W0 207 aa10.8□□□□□ -0.68
NEDD1-203ENST00000429527 RPS6KA5O75582 802 aa10.8□□□□□ -0.68
NEDD1-203ENST00000429527 PNMA6AP0CW24 399 aaPredicted RBP10.8□□□□□ -0.68
NEDD1-203ENST00000429527 CLCN6P51797 869 aa10.8□□□□□ -0.68
NEDD1-203ENST00000429527 SOX10P56693 466 aa10.8□□□□□ -0.68
NEDD1-203ENST00000429527 PPP2R5BQ15173 497 aa10.8□□□□□ -0.68
NEDD1-203ENST00000429527 ELF2Q15723 593 aa10.8□□□□□ -0.68
NEDD1-203ENST00000429527 FAM83BQ5T0W9 1011 aa10.8□□□□□ -0.68
NEDD1-203ENST00000429527 SLFN13Q68D06 897 aa10.8□□□□□ -0.68
NEDD1-203ENST00000429527 KRBA2Q6ZNG9 492 aa10.8□□□□□ -0.68
NEDD1-203ENST00000429527 GPR161Q8N6U8 529 aaKnown RBP10.8□□□□□ -0.68
NEDD1-203ENST00000429527 RAB21Q9UL25 225 aa10.8□□□□□ -0.68
NEDD1-203ENST00000429527 MAP2K7O14733 419 aa10.79□□□□□ -0.68
NEDD1-203ENST00000429527 ZSCAN12O43309 604 aa10.79□□□□□ -0.68
NEDD1-203ENST00000429527 SEC23AQ15436 765 aa10.79□□□□□ -0.68
NEDD1-203ENST00000429527 MLKLQ8NB16 471 aa10.79□□□□□ -0.68
NEDD1-203ENST00000429527 FGD4Q96M96 766 aa10.79□□□□□ -0.68
NEDD1-203ENST00000429527 UPF3AQ9H1J1 476 aaKnown RBP10.79□□□□□ -0.68
NEDD1-203ENST00000429527 NCOA5Q9HCD5 579 aaKnown RBP10.79□□□□□ -0.68
NEDD1-203ENST00000429527 V9GYY5 206 aaPredicted RBP10.79□□□□□ -0.68
NEDD1-203ENST00000429527 A0A1B0GTH6 734 aa10.79□□□□□ -0.68
NEDD1-203ENST00000429527 NRDCO43847 1150 aa10.79□□□□□ -0.68
NEDD1-203ENST00000429527 SMARCA1P28370 1054 aa10.79□□□□□ -0.68
NEDD1-203ENST00000429527 CTDSPL2Q05D32 466 aa10.79□□□□□ -0.68
NEDD1-203ENST00000429527 SNX17Q15036 470 aa10.79□□□□□ -0.68
NEDD1-203ENST00000429527 NPLOC4Q8TAT6 608 aa10.79□□□□□ -0.68
NEDD1-203ENST00000429527 ESR2Q92731 530 aa10.79□□□□□ -0.68
NEDD1-203ENST00000429527 HMX1Q9NP08 348 aaPredicted RBP10.79□□□□□ -0.68
NEDD1-203ENST00000429527 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.79□□□□□ -0.68
NEDD1-203ENST00000429527 A0A1B0GVL5 298 aa10.79□□□□□ -0.68
NEDD1-203ENST00000429527 CCDC66A2RUB6 948 aa10.79□□□□□ -0.68
NEDD1-203ENST00000429527 ZBED4O75132 1171 aa10.79□□□□□ -0.68
NEDD1-203ENST00000429527 FLOT1O75955 427 aa10.79□□□□□ -0.68
NEDD1-203ENST00000429527 IFNAR1P17181 557 aa10.79□□□□□ -0.68
NEDD1-203ENST00000429527 ERCC3P19447 782 aa10.79□□□□□ -0.68
NEDD1-203ENST00000429527 BMP6P22004 513 aa10.79□□□□□ -0.68
NEDD1-203ENST00000429527 CACNB2Q08289 660 aaPredicted RBP10.79□□□□□ -0.68
NEDD1-203ENST00000429527 NAA30Q147X3 362 aaPredicted RBP10.79□□□□□ -0.68
NEDD1-203ENST00000429527 STK38Q15208 465 aa10.79□□□□□ -0.68
NEDD1-203ENST00000429527 MTFR1Q15390 333 aa10.79□□□□□ -0.68
NEDD1-203ENST00000429527 MFSD14CQ5VZR4 134 aa10.79□□□□□ -0.68
NEDD1-203ENST00000429527 MFSD6Q6ZSS7 791 aa10.79□□□□□ -0.68
NEDD1-203ENST00000429527 CLEC10AQ8IUN9 316 aa10.79□□□□□ -0.68
NEDD1-203ENST00000429527 MSANTD4Q8NCY6 345 aa10.79□□□□□ -0.68
NEDD1-203ENST00000429527 U2AF1L4Q8WU68 220 aaKnown RBP10.79□□□□□ -0.68
NEDD1-203ENST00000429527 MAML3Q96JK9 1138 aa10.79□□□□□ -0.68
NEDD1-203ENST00000429527 LY9Q9HBG7 655 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms