RNA–Protein interactions for RNA: ENST00000429051.1

RCC1-208, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 3

Gene RCC1, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-208ENST00000429051 SLC43A3Q8NBI5 491 aa13.28□□□□□ -0.28
RCC1-208ENST00000429051 SMARCC2Q8TAQ2 1214 aa13.28□□□□□ -0.28
RCC1-208ENST00000429051 TCEANC2Q96MN5 208 aa13.28□□□□□ -0.28
RCC1-208ENST00000429051 SNX14Q9Y5W7 946 aa13.28□□□□□ -0.28
RCC1-208ENST00000429051 KLF18A0A0U1RQI7 1052 aa13.27□□□□□ -0.29
RCC1-208ENST00000429051 CCDC196A0A1B0GTZ2 297 aa13.27□□□□□ -0.29
RCC1-208ENST00000429051 GOLGA8AA7E2F4 631 aa13.27□□□□□ -0.29
RCC1-208ENST00000429051 GOLGA8BA8MQT2 603 aa13.27□□□□□ -0.29
RCC1-208ENST00000429051 PIK3CDO00329 1044 aa13.27□□□□□ -0.29
RCC1-208ENST00000429051 ARIH2O95376 493 aa13.27□□□□□ -0.29
RCC1-208ENST00000429051 TIMP1P01033 207 aa13.27□□□□□ -0.29
RCC1-208ENST00000429051 FPGSQ05932 587 aa13.27□□□□□ -0.29
RCC1-208ENST00000429051 LY6KQ17RY6 165 aa13.27□□□□□ -0.29
RCC1-208ENST00000429051 GNPTABQ3T906 1256 aa13.27□□□□□ -0.29
RCC1-208ENST00000429051 VSIG10LQ86VR7 867 aa13.27□□□□□ -0.29
RCC1-208ENST00000429051 CMTR1Q8N1G2 835 aaKnown RBP13.27□□□□□ -0.29
RCC1-208ENST00000429051 CCDC82Q8N4S0 544 aa13.27□□□□□ -0.29
RCC1-208ENST00000429051 COPS5Q92905 334 aa13.27□□□□□ -0.29
RCC1-208ENST00000429051 TBX21Q9UL17 535 aa13.27□□□□□ -0.29
RCC1-208ENST00000429051 NAP1L2Q9ULW6 460 aaPredicted RBP13.27□□□□□ -0.29
RCC1-208ENST00000429051 hCG_1984214I3L0E3 225 aa13.26□□□□□ -0.29
RCC1-208ENST00000429051 CD4P01730 458 aa13.26□□□□□ -0.29
RCC1-208ENST00000429051 SUPT20HL2P0C7V6 817 aa13.26□□□□□ -0.29
RCC1-208ENST00000429051 TGFB3P10600 412 aa13.26□□□□□ -0.29
RCC1-208ENST00000429051 ARHGAP1Q07960 439 aa13.26□□□□□ -0.29
RCC1-208ENST00000429051 LAMC2Q13753 1193 aa13.26□□□□□ -0.29
RCC1-208ENST00000429051 FRMPD4Q14CM0 1322 aa13.26□□□□□ -0.29
RCC1-208ENST00000429051 LAMA3Q16787 3333 aa13.26□□□□□ -0.29
RCC1-208ENST00000429051 XRRA1Q6P2D8 792 aa13.26□□□□□ -0.29
RCC1-208ENST00000429051 Q6ZUG5 572 aa13.26□□□□□ -0.29
RCC1-208ENST00000429051 HEATR3Q7Z4Q2 680 aa13.26□□□□□ -0.29
RCC1-208ENST00000429051 TEX2Q8IWB9 1127 aa13.26□□□□□ -0.29
RCC1-208ENST00000429051 DHX37Q8IY37 1157 aaKnown RBP13.26□□□□□ -0.29
RCC1-208ENST00000429051 ZNF713Q8N859 430 aaPredicted RBP13.26□□□□□ -0.29
RCC1-208ENST00000429051 EMID1Q96A84 441 aaPredicted RBP13.26□□□□□ -0.29
RCC1-208ENST00000429051 PSTPIP2Q9H939 334 aa13.26□□□□□ -0.29
RCC1-208ENST00000429051 DDX41Q9UJV9 622 aaKnown RBP13.26□□□□□ -0.29
RCC1-208ENST00000429051 BRPF3Q9ULD4 1205 aa13.26□□□□□ -0.29
RCC1-208ENST00000429051 CNTNAP5Q8WYK1 1306 aa13.25□□□□□ -0.29
RCC1-208ENST00000429051 EIF5BO60841 1220 aaKnown RBP13.25□□□□□ -0.29
RCC1-208ENST00000429051 MMP3P08254 477 aa13.25□□□□□ -0.29
RCC1-208ENST00000429051 CASTP20810 708 aaKnown RBP13.25□□□□□ -0.29
RCC1-208ENST00000429051 RPS6KB1P23443 525 aa13.25□□□□□ -0.29
RCC1-208ENST00000429051 METAP2P50579 478 aaKnown RBP eCLIP13.25□□□□□ -0.29
RCC1-208ENST00000429051 PSMC6P62333 389 aa13.25□□□□□ -0.29
RCC1-208ENST00000429051 PTPN11Q06124 597 aaPredicted RBP13.25□□□□□ -0.29
RCC1-208ENST00000429051 DGKDQ16760 1214 aa13.25□□□□□ -0.29
RCC1-208ENST00000429051 MFSD5Q6N075 450 aa13.25□□□□□ -0.29
RCC1-208ENST00000429051 GPR153Q6NV75 609 aa13.25□□□□□ -0.29
RCC1-208ENST00000429051 PPP1R18Q6NYC8 613 aa13.25□□□□□ -0.29
RCC1-208ENST00000429051 NFRKBQ6P4R8 1299 aa13.25□□□□□ -0.29
RCC1-208ENST00000429051 FBXL16Q8N461 479 aa13.25□□□□□ -0.29
RCC1-208ENST00000429051 TMEM199Q8N511 208 aa13.25□□□□□ -0.29
RCC1-208ENST00000429051 AFG1LQ8WV93 481 aa13.25□□□□□ -0.29
RCC1-208ENST00000429051 BRF1Q92994 677 aa13.25□□□□□ -0.29
RCC1-208ENST00000429051 EHMT1Q9H9B1 1298 aa13.25□□□□□ -0.29
RCC1-208ENST00000429051 LAMA2P24043 3122 aaKnown RBP13.25□□□□□ -0.29
RCC1-208ENST00000429051 SCN10AQ9Y5Y9 1956 aa13.25□□□□□ -0.29
RCC1-208ENST00000429051 MYH7BA7E2Y1 1941 aa13.25□□□□□ -0.29
RCC1-208ENST00000429051 GRIN2DO15399 1336 aa13.24□□□□□ -0.29
RCC1-208ENST00000429051 hCG_1642624A0A1W2PR95 340 aa13.24□□□□□ -0.29
RCC1-208ENST00000429051 SPDYE3A6NKU9 549 aa13.24□□□□□ -0.29
RCC1-208ENST00000429051 MEIS2O14770 477 aa13.24□□□□□ -0.29
RCC1-208ENST00000429051 CPA1P15085 419 aa13.24□□□□□ -0.29
RCC1-208ENST00000429051 ITGB8P26012 769 aa13.24□□□□□ -0.29
RCC1-208ENST00000429051 PPIGQ13427 754 aaKnown RBP eCLIP13.24□□□□□ -0.291e-6■■□□□ 12.3
RCC1-208ENST00000429051 FAM47CQ5HY64 1035 aa13.24□□□□□ -0.29
RCC1-208ENST00000429051 PCNX4Q63HM2 1172 aa13.24□□□□□ -0.29
RCC1-208ENST00000429051 USP17L6PQ6QN14 398 aa13.24□□□□□ -0.29
RCC1-208ENST00000429051 IL31RAQ8NI17 732 aa13.24□□□□□ -0.29
RCC1-208ENST00000429051 PPTC7Q8NI37 304 aa13.24□□□□□ -0.29
RCC1-208ENST00000429051 KATNAL1Q9BW62 490 aa13.24□□□□□ -0.29
RCC1-208ENST00000429051 GLT8D2Q9H1C3 349 aa13.24□□□□□ -0.29
RCC1-208ENST00000429051 ALDH8A1Q9H2A2 487 aaPredicted RBP13.24□□□□□ -0.29
RCC1-208ENST00000429051 HIPK3Q9H422 1215 aa13.24□□□□□ -0.29
RCC1-208ENST00000429051 SZT2Q5T011 3432 aa13.24□□□□□ -0.29
RCC1-208ENST00000429051 SOX1O00570 391 aaPredicted RBP13.23□□□□□ -0.29
RCC1-208ENST00000429051 FIBPO43427 364 aa13.23□□□□□ -0.29
RCC1-208ENST00000429051 B4GALT4O60513 344 aa13.23□□□□□ -0.29
RCC1-208ENST00000429051 RGS20O76081 388 aa13.23□□□□□ -0.29
RCC1-208ENST00000429051 GGPS1O95749 300 aa13.23□□□□□ -0.29
RCC1-208ENST00000429051 NAPAP54920 295 aa13.23□□□□□ -0.29
RCC1-208ENST00000429051 APOBRQ0VD83 1088 aa13.23□□□□□ -0.29
RCC1-208ENST00000429051 SHHQ15465 462 aa13.23□□□□□ -0.29
RCC1-208ENST00000429051 NBPF20Q3BBV1 942 aa13.23□□□□□ -0.29
RCC1-208ENST00000429051 CELF3Q5SZQ8 465 aaKnown RBP13.23□□□□□ -0.29
RCC1-208ENST00000429051 RUFY3Q7L099 469 aa13.23□□□□□ -0.29
RCC1-208ENST00000429051 NLRX1Q86UT6 975 aa13.23□□□□□ -0.29
RCC1-208ENST00000429051 GPKOWQ92917 476 aaPredicted RBP eCLIP13.23□□□□□ -0.29
RCC1-208ENST00000429051 LRCH3Q96II8 777 aa13.23□□□□□ -0.29
RCC1-208ENST00000429051 SPATA33Q96N06 139 aa13.23□□□□□ -0.29
RCC1-208ENST00000429051 INPP4AQ96PE3 977 aaPredicted RBP13.23□□□□□ -0.29
RCC1-208ENST00000429051 USP26Q9BXU7 913 aa13.23□□□□□ -0.29
RCC1-208ENST00000429051 PPP1R12CQ9BZL4 782 aa13.23□□□□□ -0.29
RCC1-208ENST00000429051 TRPV6Q9H1D0 765 aa13.23□□□□□ -0.29
RCC1-208ENST00000429051 MLXIPQ9HAP2 919 aa13.23□□□□□ -0.29
RCC1-208ENST00000429051 NOD1Q9Y239 953 aa13.23□□□□□ -0.29
RCC1-208ENST00000429051 CYP46A1Q9Y6A2 500 aa13.23□□□□□ -0.29
RCC1-208ENST00000429051 NID2Q14112 1375 aa13.22□□□□□ -0.29
RCC1-208ENST00000429051 UBA1P22314 1058 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms