RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 CCND2P30279 289 aa19.21■□□□□ 0.67
VRK2-204ENST00000428021 CDK7P50613 346 aa19.21■□□□□ 0.67
VRK2-204ENST00000428021 CCT2P78371 535 aaKnown RBP19.21■□□□□ 0.67
VRK2-204ENST00000428021 MRPS9P82933 396 aaKnown RBP19.21■□□□□ 0.67
VRK2-204ENST00000428021 CXCL17Q6UXB2 119 aa19.21■□□□□ 0.67
VRK2-204ENST00000428021 SMARCC2Q8TAQ2 1214 aa19.21■□□□□ 0.67
VRK2-204ENST00000428021 CUL5Q93034 780 aa19.21■□□□□ 0.67
VRK2-204ENST00000428021 ZNF274Q96GC6 653 aaPredicted RBP19.21■□□□□ 0.67
VRK2-204ENST00000428021 ZFP91Q96JP5 570 aaPredicted RBP19.21■□□□□ 0.67
VRK2-204ENST00000428021 GLT1D1Q96MS3 346 aa19.21■□□□□ 0.67
VRK2-204ENST00000428021 DDX41Q9UJV9 622 aaKnown RBP19.21■□□□□ 0.67
VRK2-204ENST00000428021 COLQQ9Y215 455 aaPredicted RBP19.21■□□□□ 0.67
VRK2-204ENST00000428021 A6NJR5 290 aa19.2■□□□□ 0.66
VRK2-204ENST00000428021 PRPF3O43395 683 aaKnown RBP19.2■□□□□ 0.66
VRK2-204ENST00000428021 ARHGAP1Q07960 439 aa19.2■□□□□ 0.66
VRK2-204ENST00000428021 PKN1Q16512 942 aa19.2■□□□□ 0.66
VRK2-204ENST00000428021 UBE2SQ16763 222 aa19.2■□□□□ 0.66
VRK2-204ENST00000428021 PFKFB3Q16875 520 aaPredicted RBP19.2■□□□□ 0.66
VRK2-204ENST00000428021 CHRDL2Q6WN34 429 aa19.2■□□□□ 0.66
VRK2-204ENST00000428021 PHKBQ93100 1093 aa19.2■□□□□ 0.66
VRK2-204ENST00000428021 ALDH8A1Q9H2A2 487 aaPredicted RBP19.2■□□□□ 0.66
VRK2-204ENST00000428021 BARHL2Q9NY43 387 aa19.2■□□□□ 0.66
VRK2-204ENST00000428021 hCG_1984214I3L0E3 225 aa19.19■□□□□ 0.66
VRK2-204ENST00000428021 ZEB2O60315 1214 aa19.19■□□□□ 0.66
VRK2-204ENST00000428021 CABYRO75952 493 aa19.19■□□□□ 0.66
VRK2-204ENST00000428021 NAPAP54920 295 aa19.19■□□□□ 0.66
VRK2-204ENST00000428021 PPP1R18Q6NYC8 613 aa19.19■□□□□ 0.66
VRK2-204ENST00000428021 ANKRD33Q7Z3H0 272 aa19.19■□□□□ 0.66
VRK2-204ENST00000428021 ZNF713Q8N859 430 aaPredicted RBP19.19■□□□□ 0.66
VRK2-204ENST00000428021 VTI1AQ96AJ9 217 aa19.19■□□□□ 0.66
VRK2-204ENST00000428021 GDF15Q99988 308 aa19.19■□□□□ 0.66
VRK2-204ENST00000428021 GRIN2DO15399 1336 aa19.19■□□□□ 0.66
VRK2-204ENST00000428021 MYH7BA7E2Y1 1941 aa19.18■□□□□ 0.66
VRK2-204ENST00000428021 A0A0U1RQG5 324 aaPredicted RBP19.18■□□□□ 0.66
VRK2-204ENST00000428021 ARVCFO00192 962 aa19.18■□□□□ 0.66
VRK2-204ENST00000428021 PPFIA3O75145 1194 aa19.18■□□□□ 0.66
VRK2-204ENST00000428021 GH1P01241 217 aa19.18■□□□□ 0.66
VRK2-204ENST00000428021 SCG2P13521 617 aa19.18■□□□□ 0.66
VRK2-204ENST00000428021 IFNAR1P17181 557 aa19.18■□□□□ 0.66
VRK2-204ENST00000428021 CPT1AP50416 773 aa19.18■□□□□ 0.66
VRK2-204ENST00000428021 PURAQ00577 322 aaKnown RBP19.18■□□□□ 0.66
VRK2-204ENST00000428021 SP2Q02086 613 aa19.18■□□□□ 0.66
VRK2-204ENST00000428021 SH3RF1Q7Z6J0 888 aa19.18■□□□□ 0.66
VRK2-204ENST00000428021 SLC43A3Q8NBI5 491 aa19.18■□□□□ 0.66
VRK2-204ENST00000428021 TOX2Q96NM4 488 aa19.18■□□□□ 0.66
VRK2-204ENST00000428021 RIC8AQ9NPQ8 531 aa19.18■□□□□ 0.66
VRK2-204ENST00000428021 PDLIM7Q9NR12 457 aa19.18■□□□□ 0.66
VRK2-204ENST00000428021 MRVI1Q9Y6F6 885 aa19.18■□□□□ 0.66
VRK2-204ENST00000428021 PQBP1O60828 265 aaKnown RBP19.17■□□□□ 0.66
VRK2-204ENST00000428021 MAGEA10P43363 369 aaPredicted RBP19.17■□□□□ 0.66
VRK2-204ENST00000428021 PCNX4Q63HM2 1172 aa19.17■□□□□ 0.66
VRK2-204ENST00000428021 AFG1LQ8WV93 481 aa19.17■□□□□ 0.66
VRK2-204ENST00000428021 EMID1Q96A84 441 aaPredicted RBP19.17■□□□□ 0.66
VRK2-204ENST00000428021 INPP4AQ96PE3 977 aaPredicted RBP19.17■□□□□ 0.66
VRK2-204ENST00000428021 RNF26Q9BY78 433 aaPredicted RBP19.17■□□□□ 0.66
VRK2-204ENST00000428021 POLR3EQ9NVU0 708 aa19.17■□□□□ 0.66
VRK2-204ENST00000428021 RBM27Q9P2N5 1060 aaKnown RBP19.17■□□□□ 0.66
VRK2-204ENST00000428021 PCDHA6Q9UN73 950 aa19.17■□□□□ 0.66
VRK2-204ENST00000428021 PCDHA8Q9Y5H6 950 aa19.17■□□□□ 0.66
VRK2-204ENST00000428021 SCN10AQ9Y5Y9 1956 aa19.16■□□□□ 0.66
VRK2-204ENST00000428021 TRIM43BA6NCK2 446 aa19.16■□□□□ 0.66
VRK2-204ENST00000428021 SMCO2A6NFE2 343 aa19.16■□□□□ 0.66
VRK2-204ENST00000428021 ADAMTS3O15072 1205 aa19.16■□□□□ 0.66
VRK2-204ENST00000428021 STAM2O75886 525 aa19.16■□□□□ 0.66
VRK2-204ENST00000428021 MYL3P08590 195 aa19.16■□□□□ 0.66
VRK2-204ENST00000428021 TGFB3P10600 412 aa19.16■□□□□ 0.66
VRK2-204ENST00000428021 ICAM3P32942 547 aa19.16■□□□□ 0.66
VRK2-204ENST00000428021 PSMC6P62333 389 aa19.16■□□□□ 0.66
VRK2-204ENST00000428021 FAAP100Q0VG06 881 aa19.16■□□□□ 0.66
VRK2-204ENST00000428021 SEMA3FQ13275 785 aa19.16■□□□□ 0.66
VRK2-204ENST00000428021 XRRA1Q6P2D8 792 aa19.16■□□□□ 0.66
VRK2-204ENST00000428021 KCNV1Q6PIU1 500 aa19.16■□□□□ 0.66
VRK2-204ENST00000428021 TEX2Q8IWB9 1127 aa19.16■□□□□ 0.66
VRK2-204ENST00000428021 TRIM43Q96BQ3 446 aaPredicted RBP19.16■□□□□ 0.66
VRK2-204ENST00000428021 SLC26A6Q9BXS9 759 aa19.16■□□□□ 0.66
VRK2-204ENST00000428021 RTEL1Q9NZ71 1219 aa19.16■□□□□ 0.66
VRK2-204ENST00000428021 TPCN1Q9ULQ1 816 aa19.16■□□□□ 0.66
VRK2-204ENST00000428021 TRIOBPQ9H2D6 2365 aa19.16■□□□□ 0.66
VRK2-204ENST00000428021 LTBP2Q14767 1821 aa19.16■□□□□ 0.66
VRK2-204ENST00000428021 SPATA31C2B4DYI2 1134 aa19.15■□□□□ 0.66
VRK2-204ENST00000428021 CLTBP09497 229 aa19.15■□□□□ 0.66
VRK2-204ENST00000428021 CLK2P49760 499 aaKnown RBP19.15■□□□□ 0.66
VRK2-204ENST00000428021 ADCY7P51828 1080 aa19.15■□□□□ 0.66
VRK2-204ENST00000428021 STK3Q13188 491 aa19.15■□□□□ 0.66
VRK2-204ENST00000428021 ITGA7Q13683 1181 aa19.15■□□□□ 0.66
VRK2-204ENST00000428021 BRDTQ58F21 947 aaPredicted RBP19.15■□□□□ 0.66
VRK2-204ENST00000428021 HABP4Q5JVS0 413 aaKnown RBP19.15■□□□□ 0.66
VRK2-204ENST00000428021 CELF3Q5SZQ8 465 aaKnown RBP19.15■□□□□ 0.66
VRK2-204ENST00000428021 MYSM1Q5VVJ2 828 aa19.15■□□□□ 0.66
VRK2-204ENST00000428021 FAM126BQ8IXS8 530 aa19.15■□□□□ 0.66
VRK2-204ENST00000428021 MTG1Q9BT17 334 aaPredicted RBP19.15■□□□□ 0.66
VRK2-204ENST00000428021 BCAS3Q9H6U6 928 aa19.15■□□□□ 0.66
VRK2-204ENST00000428021 ESYT2A0FGR8 921 aa19.14■□□□□ 0.65
VRK2-204ENST00000428021 SPDYE3A6NKU9 549 aa19.14■□□□□ 0.65
VRK2-204ENST00000428021 DCDC2CA8MYV0 355 aa19.14■□□□□ 0.65
VRK2-204ENST00000428021 KIAA0355O15063 1070 aa19.14■□□□□ 0.65
VRK2-204ENST00000428021 KPNA6O60684 536 aa19.14■□□□□ 0.65
VRK2-204ENST00000428021 MMP3P08254 477 aa19.14■□□□□ 0.65
VRK2-204ENST00000428021 UBA1P22314 1058 aaKnown RBP19.14■□□□□ 0.65
VRK2-204ENST00000428021 ITGB8P26012 769 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms